iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tni-119982

UUCD1 version

UUC-TeN-00551

Ensembl Protein ID

ENSTNIP00000021322.1

UniProt Accession

H3DLC4; H3DLC4_TETNG

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Gene Name

bop1; BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000018156.1	ENSTNIT00000021557.1	ENSTNIP00000021322.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-14	53.1	356	394

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH + v++++  ++   l+sGsdDg++++W++ + ++ k
   Q: 356  GHGGLVRSISVsPSgQWLASGSDDGSVRLWEVCSARCMK 394
           8**********966699***************9999987 PP

Organism

Tetraodon nigroviridis

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

EDNGDLSDSS DSVYSGLEDS GSDSDEDREE EEPGLKAEPK LDEPLCPQAV EGGKGPSEGG 60
EGKNDEYEHD SSDEEDIRNT VGNIPMEWYK DFPHIGYDLD GKRIYKPIRN KDELDEFLDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGATAATG GTGATTTGTC AGACAGCAGC GACAGTGTCT ATTCTGGACT GGAGGATTCT 60
GGGAGTGACA GTGATGAAGA TCGGGAGGAG GAAGAACCGG GCCCTGATGA TGATGATGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	43.32	2.00e-126	446.00
IUUC-Aml-001507	Ailuropoda melanoleuca	67.09	0.00e+00	817.00
IUUC-Atr-003141	Amborella trichopoda	43.16	2.00e-87	316.00
IUUC-Apl-003545	Anas platyrhynchos	64.19	0.00e+00	749.00
IUUC-Aly-005649	Arabidopsis lyrata	47.57	6.00e-161	560.00
IUUC-Ath-007625	Arabidopsis thaliana	48.14	1.00e-159	556.00
IUUC-Ago-007958	Ashbya gossypii	44.19	2.00e-163	569.00
IUUC-Acl-008344	Aspergillus clavatus	43.96	2.00e-144	505.00
IUUC-Afl-008616	Aspergillus flavus	43.25	2.00e-145	509.00
IUUC-Afu-009083	Aspergillus fumigatus	44.31	4.00e-143	501.00
IUUC-Ani-009365	Aspergillus nidulans	44.09	1.00e-146	513.00
IUUC-Ang-009796	Aspergillus niger	42.73	3.00e-141	495.00
IUUC-Aor-010015	Aspergillus oryzae	43.25	1.00e-145	509.00
IUUC-Ate-010537	Aspergillus terreus	44.22	7.00e-151	527.00
IUUC-Ame-011767	Astyanax mexicanus	75.47	4.00e-122	430.00
IUUC-Bgr-012286	Blumeria graminis	45.48	3.00e-155	541.00
IUUC-Bta-013569	Bos taurus	70.10	0.00e+00	866.00
IUUC-Bci-013820	Botrytis cinerea	43.59	6.00e-147	514.00
IUUC-Bdi-014895	Brachypodium distachyon	46.45	6.00e-155	540.00
IUUC-Bol-016099	Brassica oleracea	46.95	8.00e-159	553.00
IUUC-Bra-017174	Brassica rapa	46.78	4.00e-159	555.00
IUUC-Cel-018201	Caenorhabditis elegans	48.01	2.00e-157	548.00
IUUC-Cja-019009	Callithrix jacchus	61.70	0.00e+00	764.00
IUUC-Cfa-020173	Canis familiaris	64.24	0.00e+00	804.00
IUUC-Cpo-021796	Cavia porcellus	69.77	0.00e+00	857.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	47.72	3.00e-158	551.00
IUUC-Csa-023440	Chlorocebus sabaeus	70.16	0.00e+00	890.00
IUUC-Cin-025782	Ciona intestinalis	58.35	0.00e+00	775.00
IUUC-Csv-026352	Ciona savignyi	57.08	0.00e+00	746.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	40.66	6.00e-119	421.00
IUUC-Cne-027004	Cryptococcus neoformans	45.20	5.00e-170	591.00
IUUC-Cme-027242	Cyanidioschyzon merolae	37.85	4.00e-119	421.00
IUUC-Dre-028658	Danio rerio	76.01	0.00e+00	1016.00
IUUC-Dno-028883	Dasypus novemcinctus	67.53	0.00e+00	863.00
IUUC-Dor-031031	Dipodomys ordii	68.30	0.00e+00	885.00
IUUC-Dse-031443	Dothistroma septosporum	41.48	1.00e-147	516.00
IUUC-Dme-031786	Drosophila melanogaster	53.74	0.00e+00	719.00
IUUC-Eca-033677	Equus caballus	70.26	0.00e+00	874.00
IUUC-Eeu-035310	Erinaceus europaeus	66.73	0.00e+00	701.00
IUUC-Fca-035888	Felis catus	67.26	0.00e+00	856.00
IUUC-Fal-037438	Ficedula albicollis	62.31	0.00e+00	679.00
IUUC-Fox-037973	Fusarium oxysporum	44.19	2.00e-160	559.00
IUUC-Fso-038187	Fusarium solani	44.58	9.00e-161	560.00
IUUC-Gmo-039114	Gadus morhua	72.12	0.00e+00	903.00
IUUC-Ggr-039746	Gaeumannomyces graminis	43.43	3.00e-158	552.00
IUUC-Gga-040631	Gallus gallus	67.83	7.00e-144	503.00
IUUC-Gac-042582	Gasterosteus aculeatus	78.86	0.00e+00	1075.00
IUUC-Gma-044215	Glycine max	45.50	2.00e-148	519.00
IUUC-Ggo-045587	Gorilla gorilla	70.42	0.00e+00	894.00
IUUC-Hsa-046319	Homo sapiens	70.48	0.00e+00	894.00
IUUC-Hvu-047526	Hordeum vulgare	45.35	4.00e-147	514.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	68.97	0.00e+00	867.00
IUUC-Kpa-049221	Komagataella pastoris	42.92	2.00e-157	549.00
IUUC-Lch-049640	Latimeria chalumnae	73.70	0.00e+00	979.00
IUUC-Lpe-051135	Leersia perrieri	39.74	4.00e-117	415.00
IUUC-Loc-051930	Lepisosteus oculatus	76.61	0.00e+00	988.00
IUUC-Lma-053290	Leptosphaeria maculans	44.20	6.00e-145	508.00
IUUC-Laf-053903	Loxodonta africana	63.71	0.00e+00	762.00
IUUC-Mcc-055471	Macaca mulatta	69.84	0.00e+00	887.00
IUUC-Meu-056190	Macropus eugenii	69.34	0.00e+00	869.00
IUUC-Mor-057135	Magnaporthe oryzae	43.28	4.00e-150	525.00
IUUC-Mpo-057475	Magnaporthe poae	42.19	4.00e-146	511.00
IUUC-Mtr-058689	Medicago truncatula	42.21	7.00e-134	471.00
IUUC-Mla-059149	Melampsora laricipopulina	45.21	7.00e-166	577.00
IUUC-Mga-059645	Meleagris gallopavo	60.40	2.00e-88	318.00
IUUC-Mvi-060485	Microbotryum violaceum	44.59	5.00e-151	529.00
IUUC-Mmr-061674	Microcebus murinus	69.45	0.00e+00	868.00
IUUC-Mdo-062973	Monodelphis domestica	70.97	0.00e+00	904.00
IUUC-Mmu-064180	Mus musculus	66.62	0.00e+00	877.00
IUUC-Mac-064535	Musa acuminata	42.42	2.00e-94	340.00
IUUC-Mpu-066406	Mustela putorius furo	70.00	0.00e+00	884.00
IUUC-Mlu-067795	Myotis lucifugus	68.76	0.00e+00	844.00
IUUC-Nfi-068516	Neosartorya fischeri	44.16	2.00e-135	476.00
IUUC-Ncr-068767	Neurospora crassa	45.12	6.00e-144	504.00
IUUC-Opr-071084	Ochotona princeps	66.67	4.00e-108	384.00
IUUC-Ont-071614	Oreochromis niloticus	86.59	0.00e+00	1136.00
IUUC-Oba-075980	Oryza barthii	42.39	3.00e-132	465.00
IUUC-Obr-076799	Oryza brachyantha	44.86	3.00e-145	508.00
IUUC-Ogl-077134	Oryza glaberrima	43.66	4.00e-140	491.00
IUUC-Ogu-078655	Oryza glumaepatula	41.89	2.00e-134	473.00
IUUC-Oin-079654	Oryza indica	43.66	6.00e-140	491.00
IUUC-Olo-080706	Oryza longistaminata	40.87	3.00e-123	435.00
IUUC-Ome-081716	Oryza meridionalis	44.94	9.00e-79	288.00
IUUC-Oni-082508	Oryza nivara	42.05	2.00e-132	466.00
IUUC-Opu-083707	Oryza punctata	40.87	2.00e-122	432.00
IUUC-Oru-084453	Oryza rufipogon	40.87	3.00e-123	435.00
IUUC-Osa-085811	Oryza sativa	43.66	4.00e-140	491.00
IUUC-Ola-087361	Oryzias latipes	83.78	0.00e+00	1123.00
IUUC-Oga-088015	Otolemur garnettii	69.77	0.00e+00	900.00
IUUC-Oar-090058	Ovis aries	73.05	2.00e-72	266.00
IUUC-Ptr-090631	Pan troglodytes	65.80	4.00e-114	404.00
IUUC-Pan-092306	Papio anubis	70.21	0.00e+00	888.00
IUUC-Pma-094622	Petromyzon marinus	67.31	0.00e+00	906.00
IUUC-Pno-094794	Phaeosphaeria nodorum	40.53	8.00e-134	470.00
IUUC-Ppa-095528	Physcomitrella patens	45.62	3.00e-99	355.00
IUUC-Pfo-096682	Poecilia formosa	86.03	0.00e+00	1154.00
IUUC-Pab-097939	Pongo abelii	69.19	0.00e+00	786.00
IUUC-Pop-099530	Populus trichocarpa	48.35	2.00e-140	491.00
IUUC-Pca-100333	Procavia capensis	68.33	0.00e+00	866.00
IUUC-Ppe-102078	Prunus persica	45.91	2.00e-149	522.00
IUUC-Pgr-103525	Puccinia graminis	44.58	8.00e-153	534.00
IUUC-Ptt-103929	Puccinia triticina	44.32	1.00e-149	523.00
IUUC-Pte-104029	Pyrenophora teres	42.79	1.00e-153	536.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	43.26	3.00e-154	538.00
IUUC-Rno-105248	Rattus norvegicus	69.01	0.00e+00	879.00
IUUC-Sce-106381	Saccharomyces cerevisiae	41.82	8.00e-159	553.00
IUUC-Sha-106519	Sarcophilus harrisii	69.16	0.00e+00	888.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	43.08	2.00e-142	499.00
IUUC-Spo-108071	Schizosaccharomyces pombe	41.78	4.00e-141	494.00
IUUC-Smo-109604	Selaginella moellendorffii	46.79	2.00e-156	546.00
IUUC-Sit-110551	Setaria italica	45.98	3.00e-148	518.00
IUUC-Sly-110970	Solanum lycopersicum	46.94	1.00e-82	300.00
IUUC-Stu-112593	Solanum tuberosum	46.70	8.00e-155	540.00
IUUC-Sar-113123	Sorex araneus	63.24	1.00e-108	385.00
IUUC-Sbi-113945	Sorghum bicolor	45.18	2.00e-150	525.00
IUUC-Sre-115188	Sporisorium reilianum	43.45	5.00e-158	551.00
IUUC-Ssc-115352	Sus scrofa	69.24	0.00e+00	872.00
IUUC-Tru-117685	Takifugu rubripes	92.49	0.00e+00	1224.00
IUUC-Tca-121664	Theobroma cacao	46.98	9.00e-157	546.00
IUUC-Tre-122229	Trichoderma reesei	43.56	1.00e-140	493.00
IUUC-Tvi-122576	Trichoderma virens	44.51	1.00e-147	516.00
IUUC-Tae-124110	Triticum aestivum	45.65	5.00e-138	484.00
IUUC-Tur-126781	Triticum urartu	43.32	4.00e-122	431.00
IUUC-Tme-127080	Tuber melanosporum	47.88	5.00e-178	617.00
IUUC-Ttr-128514	Tursiops truncatus	68.55	2.00e-174	605.00
IUUC-Uma-129556	Ustilago maydis	42.22	3.00e-149	522.00
IUUC-Vda-129715	Verticillium dahliae	43.34	6.00e-153	534.00
IUUC-Vvi-131211	Vitis vinifera	46.15	2.00e-147	516.00
IUUC-Xma-133883	Xiphophorus maculatus	85.51	0.00e+00	1111.00
IUUC-Yli-134438	Yarrowia lipolytica	43.61	9.00e-144	504.00
IUUC-Zma-135341	Zea mays	41.51	3.00e-136	478.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence