iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005544

Ensembl Protein ID

scaffold_301808.1

UniProt Accession

D7L4T9; D7L4T9_ARALL

Genbank Protein ID

EFH61348.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_897838

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_301808.1	scaffold_301808.1	scaffold_301808.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-28	95.8	513	550

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d+v +la+  s  +l+s+s D+t+++W+l+++++lk
   Q: 513  GHVDDVLDLAWskS-QYLLSSSMDKTVRLWNLSSQTCLK 550
           8**********643.9********************987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSYHNEEEEE GDTNDCFYES LDRLASSSSC SCSASNSDYD SESSPRISSA ASHDSEEHNG 60
GGRRRRYPFP VPRFPMGASK FDVWISEPAS VSERRSKLLN EMGLSRDPVL SRLKPVSDSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGGCTTCA TTGCTACGAC CATGAGCTAC CACAACGAGG AAGAAGAGGA AGGAGACACC 60
AACGATTGCT TCTACGAGTC TCTTGATCGT TTAGCTTCTT CCTCTTCTTG CTCTTGTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_897838

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007572	Arabidopsis thaliana	95.44	0.00e+00	1237.00
IUUC-Ago-007814	Ashbya gossypii	31.55	2.00e-41	163.00
IUUC-Afl-008536	Aspergillus flavus	31.36	8.00e-58	218.00
IUUC-Afu-008761	Aspergillus fumigatus	34.81	1.00e-55	211.00
IUUC-Ani-009270	Aspergillus nidulans	36.84	6.00e-56	212.00
IUUC-Ang-009627	Aspergillus niger	37.94	2.00e-55	210.00
IUUC-Aor-010153	Aspergillus oryzae	34.89	5.00e-57	215.00
IUUC-Ate-010263	Aspergillus terreus	38.59	2.00e-55	210.00
IUUC-Ame-011096	Astyanax mexicanus	39.30	1.00e-57	218.00
IUUC-Bgr-012014	Blumeria graminis	36.73	2.00e-54	206.00
IUUC-Bci-013651	Botrytis cinerea	31.02	4.00e-58	219.00
IUUC-Bol-016551	Brassica oleracea	80.29	0.00e+00	1065.00
IUUC-Bra-017437	Brassica rapa	78.82	0.00e+00	992.00
IUUC-Cel-018681	Caenorhabditis elegans	38.53	4.00e-58	219.00
IUUC-Cpo-021357	Cavia porcellus	32.90	6.00e-60	225.00
IUUC-Cin-025347	Ciona intestinalis	33.33	9.00e-59	220.00
IUUC-Csv-025844	Ciona savignyi	32.08	4.00e-54	205.00
IUUC-Cgl-026610	Colletotrichum gloeosporioides	35.11	5.00e-54	205.00
IUUC-Dor-030184	Dipodomys ordii	46.70	1.00e-44	174.00
IUUC-Dse-031178	Dothistroma septosporum	33.33	1.00e-56	214.00
IUUC-Dme-032135	Drosophila melanogaster	31.96	8.00e-60	225.00
IUUC-Ete-032457	Echinops telfairi	34.08	2.00e-40	160.00
IUUC-Eeu-035325	Erinaceus europaeus	32.79	1.00e-43	171.00
IUUC-Fal-037153	Ficedula albicollis	47.27	8.00e-55	208.00
IUUC-Fso-038143	Fusarium solani	35.26	2.00e-55	210.00
IUUC-Gmo-039226	Gadus morhua	38.48	2.00e-58	220.00
IUUC-Ggr-039923	Gaeumannomyces graminis	36.66	3.00e-54	206.00
IUUC-Gac-041620	Gasterosteus aculeatus	39.69	8.00e-59	221.00
IUUC-Kpa-049365	Komagataella pastoris	26.82	6.00e-37	148.00
IUUC-Lch-049794	Latimeria chalumnae	32.68	8.00e-60	224.00
IUUC-Loc-052691	Lepisosteus oculatus	31.60	3.00e-60	226.00
IUUC-Lma-053232	Leptosphaeria maculans	34.96	3.00e-57	216.00
IUUC-Meu-056678	Macropus eugenii	36.82	5.00e-35	142.00
IUUC-Mor-057274	Magnaporthe oryzae	34.91	2.00e-56	213.00
IUUC-Mpo-057592	Magnaporthe poae	35.69	3.00e-53	203.00
IUUC-Mla-059075	Melampsora laricipopulina	36.48	7.00e-32	131.00
IUUC-Mvi-060254	Microbotryum violaceum	39.49	3.00e-58	219.00
IUUC-Ncr-068874	Neurospora crassa	34.77	1.00e-54	207.00
IUUC-Opr-071139	Ochotona princeps	46.70	8.00e-45	175.00
IUUC-Ont-072128	Oreochromis niloticus	32.26	2.00e-59	223.00
IUUC-Oan-072824	Ornithorhynchus anatinus	44.65	9.00e-39	154.00
IUUC-Olu-087651	Ostreococcus lucimarinus	39.70	2.00e-48	185.00
IUUC-Pno-094806	Phaeosphaeria nodorum	32.61	4.00e-53	201.00
IUUC-Pfo-097366	Poecilia formosa	30.36	3.00e-59	223.00
IUUC-Ppe-101184	Prunus persica	56.07	0.00e+00	791.00
IUUC-Pva-102846	Pteropus vampyrus	46.70	1.00e-44	174.00
IUUC-Pte-104369	Pyrenophora teres	32.99	1.00e-57	217.00
IUUC-Pyt-104811	Pyrenophora triticirepentis	31.82	1.00e-56	213.00
IUUC-Sce-106277	Saccharomyces cerevisiae	30.18	4.00e-45	176.00
IUUC-Sly-111804	Solanum lycopersicum	61.87	0.00e+00	837.00
IUUC-Sar-112958	Sorex araneus	57.38	3.00e-19	90.10
IUUC-Sbi-114454	Sorghum bicolor	50.60	4.00e-176	610.00
IUUC-Tru-117808	Takifugu rubripes	39.62	7.00e-58	218.00
IUUC-Tni-120013	Tetraodon nigroviridis	37.39	7.00e-53	201.00
IUUC-Tre-122175	Trichoderma reesei	36.60	7.00e-54	204.00
IUUC-Tvi-122654	Trichoderma virens	33.41	2.00e-54	207.00
IUUC-Tme-126882	Tuber melanosporum	35.50	4.00e-61	229.00
IUUC-Tbe-127531	Tupaia belangeri	46.70	1.00e-43	171.00
IUUC-Vda-129935	Verticillium dahliae	32.99	2.00e-59	224.00
IUUC-Xma-134131	Xiphophorus maculatus	30.36	3.00e-59	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence