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Tag Content
iUUCD ID IUUC-Bra-017998
Ensembl Protein ID Bra040518.1-P
UniProt Accession M4FHE0; M4FHE0_BRARP
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra040518 Bra040518.1 Bra040518.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 2.00e-11 44.9 1263 1309
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC++Cg  ++d+ s++ C+ C+  +H  Cl+++     p+ + w+Cp+C 
   Q: 1263 VCKICGVDKDDD-SVLLCDTCDAEYHTYCLNPP-LIRIPDGN-WYCPSCV 1309
           8*****999977.7*******************.9******6.******6 PP
   
Organism Brassica rapa
Protein Sequence
(Fasta)
MELTDSTKKQ LGETRSAALD EDNRSFLGID LNEIPTGVTP GGAVQDDDGE YEPVEVVRSI 60
HDNPDPAPGA PAEVPEPDRD AACGACGRPE SMELVVVCDA CERGFHLNCV NDGVEAAPSA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Bra-017998|E3,PHD|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAACTCA CTGATTCTAC GAAAAAGCAA CTCGGAGAGA CCAGGAGCGC CGCTCTCGAC 60
GAAGATAATC GCTCCTTTCT CGGCATCGAT CTTAACGAAA TCCCTACCGG CGTTACTCCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Bra-017998|E3,PHD|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001487--Bromodomain
IPR016177--DNA-bd_dom
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR001739--Methyl_CpG_DNA-bd
IPR028942--WHIM1_dom
IPR028941--WHIM2_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51543--FYRC
PS51542--FYRN
PS50982--MBD
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF05964--FYRN
PF01429--MBD
PF00628--PHD
PF15612--WHIM1
PF15613--WSD
SMART

SM00249--PHD
Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000077 Aegilops tauschii 41.38 2.00e-154 540.00
IUUC-Aml-001963 Ailuropoda melanoleuca 54.00 6.00e-13 70.50
IUUC-Atr-002838 Amborella trichopoda 40.13 0.00e+00 1093.00
IUUC-Apl-003524 Anas platyrhynchos 52.83 3.00e-06 47.40
IUUC-Aca-004712 Anolis carolinensis 56.00 3.00e-06 48.10
IUUC-Aly-006097 Arabidopsis lyrata 80.44 0.00e+00 3321.00
IUUC-Ath-007218 Arabidopsis thaliana 79.92 0.00e+00 3241.00
IUUC-Acl-008162 Aspergillus clavatus 48.94 2.00e-12 69.30
IUUC-Afl-008625 Aspergillus flavus 48.94 2.00e-12 68.60
IUUC-Afu-008796 Aspergillus fumigatus 48.94 1.00e-12 69.70
IUUC-Ani-009139 Aspergillus nidulans 48.94 9.00e-13 70.10
IUUC-Aor-010155 Aspergillus oryzae 48.94 2.00e-12 68.60
IUUC-Ate-010453 Aspergillus terreus 44.68 1.00e-11 66.20
IUUC-Ame-010620 Astyanax mexicanus 56.00 2.00e-13 72.00
IUUC-Bci-013992 Botrytis cinerea 41.67 1.00e-10 62.80
IUUC-Bdi-014742 Brachypodium distachyon 35.06 1.00e-149 523.00
IUUC-Bol-015506 Brassica oleracea 93.70 0.00e+00 3983.00
IUUC-Cja-019443 Callithrix jacchus 41.38 2.00e-13 72.40
IUUC-Cre-022637 Chlamydomonas reinhardtii 53.33 6.00e-09 51.60
IUUC-Cho-024280 Choloepus hoffmanni 54.00 7.00e-13 70.10
IUUC-Cin-025321 Ciona intestinalis 52.08 3.00e-11 64.70
IUUC-Cgl-026613 Colletotrichum gloeosporioides 34.92 3.00e-09 58.20
IUUC-Cne-026801 Cryptococcus neoformans 48.94 5.00e-13 70.10
IUUC-Dse-031479 Dothistroma septosporum 40.82 1.00e-09 60.10
IUUC-Dme-032021 Drosophila melanogaster 50.94 1.00e-12 69.70
IUUC-Ete-033144 Echinops telfairi 54.00 4.00e-13 71.20
IUUC-Eca-034265 Equus caballus 54.00 6.00e-13 70.50
IUUC-Fso-038127 Fusarium solani 41.27 2.00e-11 65.90
IUUC-Gmo-039140 Gadus morhua 56.00 6.00e-14 73.60
IUUC-Gga-040802 Gallus gallus 46.15 1.00e-13 73.20
IUUC-Gac-041825 Gasterosteus aculeatus 58.49 4.00e-15 77.40
IUUC-Gma-042823 Glycine max 44.17 0.00e+00 1474.00
IUUC-Ggo-044856 Gorilla gorilla 54.00 6.00e-13 70.50
IUUC-Hvu-047583 Hordeum vulgare 33.80 1.00e-136 480.00
IUUC-Lpe-050785 Leersia perrieri 37.58 0.00e+00 998.00
IUUC-Mcc-055474 Macaca mulatta 50.94 3.00e-13 71.60
IUUC-Mpo-057317 Magnaporthe poae 38.10 7.00e-09 57.00
IUUC-Mtr-058285 Medicago truncatula 43.91 0.00e+00 1501.00
IUUC-Mga-059358 Meleagris gallopavo 47.69 9.00e-14 73.20
IUUC-Mmr-061032 Microcebus murinus 54.00 6.00e-06 47.00
IUUC-Mdo-062754 Monodelphis domestica 54.00 6.00e-06 47.40
IUUC-Mac-065069 Musa acuminata 42.97 0.00e+00 840.00
IUUC-Mlu-068086 Myotis lucifugus 56.00 2.00e-13 71.60
IUUC-Nfi-068430 Neosartorya fischeri 48.94 1.00e-12 69.70
IUUC-Ont-072274 Oreochromis niloticus 60.00 7.00e-15 76.60
IUUC-Oan-073160 Ornithorhynchus anatinus 52.83 7.00e-07 50.10
IUUC-Ocu-074440 Oryctolagus cuniculus 54.00 6.00e-06 47.00
IUUC-Oba-075854 Oryza barthii 37.46 0.00e+00 1091.00
IUUC-Obr-076343 Oryza brachyantha 36.90 0.00e+00 1098.00
IUUC-Ogl-077886 Oryza glaberrima 37.33 5.00e-170 591.00
IUUC-Ogu-078887 Oryza glumaepatula 36.17 0.00e+00 1103.00
IUUC-Olo-080668 Oryza longistaminata 37.58 0.00e+00 1095.00
IUUC-Ome-081800 Oryza meridionalis 37.41 0.00e+00 1090.00
IUUC-Oni-082593 Oryza nivara 37.51 0.00e+00 1093.00
IUUC-Opu-083363 Oryza punctata 36.11 0.00e+00 1088.00
IUUC-Oru-084298 Oryza rufipogon 38.36 0.00e+00 1088.00
IUUC-Osa-085487 Oryza sativa 36.09 8.00e-154 537.00
IUUC-Psi-093550 Pelodiscus sinensis 43.59 4.00e-13 71.20
IUUC-Pma-094733 Petromyzon marinus 55.32 9.00e-13 68.60
IUUC-Pno-094879 Phaeosphaeria nodorum 51.22 4.00e-11 64.30
IUUC-Ppa-095893 Physcomitrella patens 36.30 1.00e-97 352.00
IUUC-Ppe-101198 Prunus persica 48.45 0.00e+00 1578.00
IUUC-Pgr-103434 Puccinia graminis 55.10 7.00e-17 81.30
IUUC-Pte-104195 Pyrenophora teres 51.06 1.00e-13 72.80
IUUC-Pyt-104566 Pyrenophora triticirepentis 51.06 1.00e-13 72.80
IUUC-Rno-105673 Rattus norvegicus 54.00 4.00e-06 47.80
IUUC-Sce-106207 Saccharomyces cerevisiae 42.31 2.00e-11 64.30
IUUC-Sha-107506 Sarcophilus harrisii 44.74 2.00e-13 72.00
IUUC-Spo-108283 Schizosaccharomyces pombe 55.56 6.00e-13 70.50
IUUC-Ssl-108489 Sclerotinia sclerotiorum 41.67 1.00e-10 63.20
IUUC-Sit-110633 Setaria italica 38.29 0.00e+00 1022.00
IUUC-Sar-113477 Sorex araneus 54.00 5.00e-13 70.50
IUUC-Sre-115066 Sporisorium reilianum 47.92 1.00e-11 65.50
IUUC-Tgu-117452 Taeniopygia guttata 50.00 3.00e-13 71.20
IUUC-Tca-121595 Theobroma cacao 47.40 0.00e+00 1756.00
IUUC-Tre-122213 Trichoderma reesei 37.14 4.00e-11 64.70
IUUC-Tvi-122263 Trichoderma virens 39.68 8.00e-11 63.50
IUUC-Tae-123821 Triticum aestivum 37.32 0.00e+00 1011.00
IUUC-Tur-126242 Triticum urartu 41.46 2.00e-153 536.00
IUUC-Tme-127087 Tuber melanosporum 45.83 3.00e-10 61.60
IUUC-Tbe-128040 Tupaia belangeri 54.00 8.00e-06 46.60
IUUC-Uma-129590 Ustilago maydis 45.10 5.00e-11 64.30
IUUC-Vpa-130433 Vicugna pacos 54.00 4.00e-06 47.00
IUUC-Vvi-130929 Vitis vinifera 43.33 0.00e+00 1481.00
IUUC-Xtr-132008 Xenopus tropicalis 39.60 5.00e-14 73.90
IUUC-Zma-135560 Zea mays 35.80 0.00e+00 1055.00
Created Date 25-Jun-2017

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