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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-006706
Ensembl Protein ID AT4G15410.1
UniProt Accession Q7Y175; O23394; Q94A11; PUX5_ARATH
Genbank Protein ID CAB10320.1; CAB78583.1; AEE83597.1; AAK92701.1; AAP46195.1
Protein Name Plant UBX domain-containing protein 5
Genbank Nucleotide ID Z97338; AL161541; CP002687; AY050766; BT008747
Gene Name PUX5; At4g15410; dl3750w; FCAALL.290
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G15410 AT4G15410.1 AT4G15410.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexPINAMentha
Post-translational Modifications (PTMs)
dbPPTdbPTM
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
UBD/Alpha-Helix/UBA UBA 17190830
Classification
Family E-value Score Start End
UBD/Alpha-Helix/UBA 7.90e-05 23.5 5 44
ULD/UDP/UFD/UBX 2.30e-12 48.1 346 418
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/UBA

   S: 2    ededkleqlve.MGFdreealqaLraannnleaAveyLld 40
    ++e +++ ++e + +reea L+++ +nl+aAv +ld
   Q: 5 TNENLINSFIEiTSSSREEANFFLESHTWNLDAAVSTFLD 44
    57899******9999*********************9997 PP
   


   ULD/UDP/UFD/UBX

   S: 4    eqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvs.pfPrrtlkpeehmstlqeagLvpsgsl 77
    +++ +q+Rl+dG rlv +F+ +t+++++ f++ ++ s++++L++ +fP ++l++ ++ t+++ag+++ ++
   Q: 346 PTTSIQLRLADGTRLVSRFNNHHTVRDVRGFIDASRPGGSKEYQLLTmGFPPKQLTELDQ--TIEQAGIANAVVI 418
    6899*****************************9999999999988747***********..********99887 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MATETNENLI NSFIEITSSS REEANFFLES HTWNLDAAVS TFLDNDAAAA AEPNPTGPPP 60
PSSTIAGAQS PSQSHSPDYT PSETSPSPSR SRSASPSSRA APYGLRSRGG AGENKETENP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-006706|UBD,UBA;ULD,UBX|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGAAGTTTGA CGGTGAAAAA AGGAAAATAT TTACATATAT ATAGTAAAAT TAAAATAGTA 60
GAAAGAAAAA AATCAGAAAG CTACGAAAGA AAAAAAAAAC AATCTAGCAA CAGAAGAAGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006706|UBD,UBA;ULD,UBX|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR012989--SEP_domain
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS51399--SEP
PS50033--UBX

Pfam

PF08059--SEP
PF00789--UBX

SMART

SM00553--SEP
SM00166--UBX

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0051117--F:ATPase binding
GO:0043130--F:ubiquitin binding
GO:0007030--P:Golgi organization
GO:0061025--P:membrane fusion
GO:0031468--P:nuclear envelope reassembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG ath:AT4G15410
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005688 Arabidopsis lyrata 84.62 8.00e-165 573.00
IUUC-Ago-007933 Ashbya gossypii 25.97 1.00e-14 73.60
IUUC-Ani-009398 Aspergillus nidulans 33.33 2.00e-29 122.00
IUUC-Bol-015660 Brassica oleracea 79.54 6.00e-129 453.00
IUUC-Bra-017637 Brassica rapa 78.88 2.00e-127 447.00
IUUC-Cho-024683 Choloepus hoffmanni 31.58 2.00e-12 65.10
IUUC-Cgl-026628 Colletotrichum gloeosporioides 31.79 1.00e-16 80.50
IUUC-Cne-026798 Cryptococcus neoformans 34.31 2.00e-27 116.00
IUUC-Cme-027347 Cyanidioschyzon merolae 32.48 1.00e-24 105.00
IUUC-Dse-031256 Dothistroma septosporum 31.68 3.00e-25 108.00
IUUC-Gma-044294 Glycine max 54.35 5.00e-103 367.00
IUUC-Mla-059077 Melampsora laricipopulina 30.66 3.00e-31 129.00
IUUC-Pop-098970 Populus trichocarpa 54.48 4.00e-102 363.00
IUUC-Ppe-101417 Prunus persica 53.76 1.00e-103 369.00
IUUC-Tca-121370 Theobroma cacao 53.32 6.00e-99 353.00
Created Date 25-Jun-2017

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