iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114412

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G130100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g011270	Sb04g011270.1	Sb04g011270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	9.80e-17	61.8	36	137
E2/UEV	8.10e-69	230.8	8	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E2/UBC

   S: 17   isakpvdesd..ltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilkeeekWspalsvesvllsiqsll 109
           +s++++d +d  +  w  +i+Gp++t++eg++++l++ +++dYP kPP+v+f ++i   +v+++ G v    ++   +W+  +++e++l+++++ +
   Q: 36   VSYGMDDADDiyMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHEtGVVDPKKFGLLANWQRDYTMENILTQLKKEM 131
           45556666557799************************************************997888766665668*****************99 PP
   S: 110  aepnpe 115
           a  +++
   Q: 132  AASQNR 137
           776554 PP

E2/UEV

   S: 5    selkvvvprnfrlleeleegekglgdgtvsygldDgddilllsltgtIigpertayegrIyqlklfvgkkYPekPPtvrfsskinmaevndsnGvv 100
            +++vvvprnfrlleele+gekg+gdgtvsyg+dD+ddi+++s+tgtIigp++t++egrIyqlklf++k+YPekPP vrf+s+inm++vn+++Gvv
   Q: 8    AGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 103
           5789******************************************************************************************** PP
   S: 101  dpralpvLanWkreysievvlvqlkkellskenrklqqPpeGnlf 145
           dp+++++LanW+r+y++e +l+qlkke+++++nrkl+qPpeG++f
   Q: 104  DPKKFGLLANWQRDYTMENILTQLKKEMAASQNRKLVQPPEGTFF 148
           ******************************************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTLGSSGAGS SVVVPRNFRL LEELERGEKG IGDGTVSYGM DDADDIYMRS WTGTIIGPHN 60
TVHEGRIYQL KLFCDKDYPE KPPSVRFHSR INMTCVNHET GVVDPKKFGL LANWQRDYTM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGAGGAAT CAGAGCGAAC AACCGTGTCG CCCTCGCTCG GTCTCCAGCC TTTGCTTTGT 60
GCGCAGCCGC AGCCGCTGCT TTTTCCTGCC TCTTCATCCT GCCCGAGGGC GAAACCCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006301--P:postreplication repair
GO:0070534--P:protein K63-linked ubiquitination

KEGG

sbi:SORBI_04g011270

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000910	Aegilops tauschii	89.36	5.00e-72	261.00
IUUC-Atr-003005	Amborella trichopoda	89.86	1.00e-74	270.00
IUUC-Aly-006035	Arabidopsis lyrata	92.57	5.00e-76	275.00
IUUC-Ath-007596	Arabidopsis thaliana	91.95	2.00e-74	269.00
IUUC-Ago-007810	Ashbya gossypii	55.56	4.00e-36	142.00
IUUC-Afl-008598	Aspergillus flavus	54.35	6.00e-37	145.00
IUUC-Ani-009325	Aspergillus nidulans	52.14	4.00e-37	145.00
IUUC-Ang-009631	Aspergillus niger	55.56	3.00e-37	146.00
IUUC-Aor-010051	Aspergillus oryzae	54.35	6.00e-37	145.00
IUUC-Ate-010471	Aspergillus terreus	51.46	9.00e-31	124.00
IUUC-Bdi-014636	Brachypodium distachyon	93.92	2.00e-72	263.00
IUUC-Bol-015323	Brassica oleracea	93.24	2.00e-76	276.00
IUUC-Bra-018041	Brassica rapa	93.24	2.00e-76	276.00
IUUC-Cel-018398	Caenorhabditis elegans	47.10	2.00e-32	130.00
IUUC-Cho-025024	Choloepus hoffmanni	45.45	2.00e-21	92.80
IUUC-Cgl-026596	Colletotrichum gloeosporioides	56.30	1.00e-38	150.00
IUUC-Cme-027257	Cyanidioschyzon merolae	57.04	5.00e-33	132.00
IUUC-Eca-034422	Equus caballus	52.05	2.00e-40	157.00
IUUC-Fox-037803	Fusarium oxysporum	53.62	2.00e-38	149.00
IUUC-Fso-038147	Fusarium solani	52.90	7.00e-37	145.00
IUUC-Gma-043818	Glycine max	93.24	2.00e-76	276.00
IUUC-Hvu-047368	Hordeum vulgare	93.24	7.00e-72	261.00
IUUC-Lch-050494	Latimeria chalumnae	54.74	1.00e-42	164.00
IUUC-Lpe-050874	Leersia perrieri	93.24	4.00e-72	262.00
IUUC-Meu-056842	Macropus eugenii	43.53	1.00e-13	69.70
IUUC-Mor-056915	Magnaporthe oryzae	34.84	1.00e-17	81.60
IUUC-Mpo-057437	Magnaporthe poae	42.28	1.00e-23	101.00
IUUC-Mtr-058577	Medicago truncatula	92.00	3.00e-75	272.00
IUUC-Mla-058919	Melampsora laricipopulina	58.99	6.00e-37	145.00
IUUC-Mac-065637	Musa acuminata	90.30	2.00e-68	250.00
IUUC-Ncr-068946	Neurospora crassa	44.30	6.00e-33	132.00
IUUC-Ocu-074447	Oryctolagus cuniculus	52.41	1.00e-39	154.00
IUUC-Oba-075005	Oryza barthii	93.24	2.00e-71	259.00
IUUC-Obr-076191	Oryza brachyantha	97.97	2.00e-82	296.00
IUUC-Ogl-077233	Oryza glaberrima	93.24	2.00e-71	259.00
IUUC-Ogu-078374	Oryza glumaepatula	93.24	2.00e-71	259.00
IUUC-Oin-079721	Oryza indica	93.24	2.00e-71	259.00
IUUC-Olo-080242	Oryza longistaminata	90.91	1.00e-71	261.00
IUUC-Ome-081761	Oryza meridionalis	93.24	4.00e-72	263.00
IUUC-Oni-082346	Oryza nivara	93.24	2.00e-71	259.00
IUUC-Opu-083148	Oryza punctata	93.24	2.00e-71	259.00
IUUC-Oru-084359	Oryza rufipogon	93.24	2.00e-71	259.00
IUUC-Osa-085664	Oryza sativa	93.24	2.00e-71	259.00
IUUC-Psi-093138	Pelodiscus sinensis	52.48	2.00e-38	150.00
IUUC-Pno-095070	Phaeosphaeria nodorum	56.30	8.00e-37	144.00
IUUC-Ppa-095557	Physcomitrella patens	78.72	5.00e-62	228.00
IUUC-Pop-099176	Populus trichocarpa	91.89	8.00e-76	274.00
IUUC-Ppe-101196	Prunus persica	91.22	7.00e-75	271.00
IUUC-Pte-104176	Pyrenophora teres	57.04	5.00e-38	149.00
IUUC-Pyt-104517	Pyrenophora triticirepentis	57.04	5.00e-38	149.00
IUUC-Smo-109006	Selaginella moellendorffii	78.10	6.00e-56	208.00
IUUC-Sit-110196	Setaria italica	99.32	1.00e-75	273.00
IUUC-Sly-111205	Solanum lycopersicum	90.54	2.00e-74	270.00
IUUC-Stu-112459	Solanum tuberosum	89.86	4.00e-74	268.00
IUUC-Tru-118526	Takifugu rubripes	52.99	1.00e-27	114.00
IUUC-Tni-120169	Tetraodon nigroviridis	49.65	4.00e-28	115.00
IUUC-Tca-121288	Theobroma cacao	93.24	2.00e-76	276.00
IUUC-Tae-124408	Triticum aestivum	93.92	3.00e-72	262.00
IUUC-Tur-126236	Triticum urartu	91.24	5.00e-72	261.00
IUUC-Tme-127171	Tuber melanosporum	54.07	1.00e-32	130.00
IUUC-Tbe-128105	Tupaia belangeri	52.55	4.00e-41	161.00
IUUC-Vvi-131466	Vitis vinifera	93.24	8.00e-77	277.00
IUUC-Zma-135558	Zea mays	98.65	1.00e-75	273.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence