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Tag Content
iUUCD ID IUUC-Lch-050419
Ensembl Protein ID ENSLACP00000003537.1
UniProt Accession H3A1L6; H3A1L6_LATCH
Genbank Protein ID ENSLACP00000003537
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01207825
Gene Name USP39
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000003152.1 ENSLACT00000003568.1 ENSLACP00000003537.1
ENSLACG00000003152.1 ENSLACT00000003569.1 ENSLACP00000003538.1
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 8.80e-50 170.0 182 512
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP
   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsg 86
           +Gl+N+ +  Y N vLQ+Lsn+p+lr+++le+++ ++ ++ p +    l++ + +l+++lw   + k +vsp+e+l+a+  ++++ f+ 
   Q: 182  VGLNNIKANDYANVVLQALSNVPPLRNYFLEEDNYRTIKRPPGDIMFLLVQRFGELMRKLWnpRNFKAHVSPHEMLQAVVLCSNKnFQI 270
           6************************************************************999999***********99998887*** PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk................sqikclec 159
           ++q Da +fl+++l++++ +l                          +kkk+ks+++++Fqg+++                +q+  +e 
   Q: 271  TKQGDAVDFLSWFLNAMHGAL------------------------GGTKKKKKSIVTEVFQGSMRifskklphpdlpveekEQLLLNEE 335
           *********************........................456777788888888888888888888888888887******** PP
   S: 160  dnvssreepfldlslpvpgkeetkke.........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsf 239
            +++ +e++f++l+l++p     k e          l ++L++f    e e    y++ k     +  k+++l+klP++Li+ +kRf  
   Q: 336  YQEKMSESTFMYLTLDLPTAPLYKDEkeqliipqvPLFNILAKFNGITEKE----YKTYK----ENFLKRFQLTKLPPYLIFYIKRF-- 414
           ******************877776664455566666666666666666655....44333....3489*******************.. PP
   S: 240  seeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleet 326
           ++++ + ek+ + v+fp++ +dl+++++++ ++++++++Y+Lia +vH G++s+G Y  +v +  +gkW+++ D +Vt +  + +    
   Q: 415  TKNNFFVEKNPTIVNFPITnVDLREYLSEEVQASHKHTTYDLIANIVHDGKPSEGCYRIHVLHhGTGKWYELQDLQVTDILPQMITL-- 501
           88889********************************************************9935666******************9.. PP
   S: 327  gstaYvlfYkrr 338
            s+aY+ ++krr
   Q: 502  -SEAYIQIWKRR 512
           .********985 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
PSYPVIPSKI FSFLAIPPGP QMAVRVKRER ERSPIPEEEE EEVVGKYTRL DGFPEDRRSR 60
HCPYLDTINR SVLDFDFEKL CSISLSHINV YACLVCGKYF QGRGLKSHAY IHSVQFSHHV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050419|DUB,USP|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCTTCATATC CTGTAATACC GAGTAANNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050419|DUB,USP|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP
PROSITE

PS50235--USP_3
PS50271--ZF_UBP
Pfam

PF00443--UCH
PF02148--zf-UBP
SMART

SM00290--ZnF_UBP
Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0048855--P:adenohypophysis morphogenesis
GO:0016579--P:protein deubiquitination
GO:0043484--P:regulation of RNA splicing
GO:0000245--P:spliceosomal complex assembly
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000483 Aegilops tauschii 53.26 2.00e-131 462.00
IUUC-Aml-001846 Ailuropoda melanoleuca 90.60 0.00e+00 905.00
IUUC-Atr-002758 Amborella trichopoda 50.42 3.00e-130 458.00
IUUC-Apl-003336 Anas platyrhynchos 71.33 4.00e-167 580.00
IUUC-Aca-004846 Anolis carolinensis 93.83 0.00e+00 871.00
IUUC-Aly-005683 Arabidopsis lyrata 50.65 2.00e-118 419.00
IUUC-Ath-007661 Arabidopsis thaliana 50.66 3.00e-118 418.00
IUUC-Ago-007802 Ashbya gossypii 30.89 6.00e-59 221.00
IUUC-Acl-008304 Aspergillus clavatus 42.19 1.00e-96 347.00
IUUC-Afl-008735 Aspergillus flavus 58.12 7.00e-40 158.00
IUUC-Afu-009100 Aspergillus fumigatus 41.55 8.00e-94 337.00
IUUC-Ani-009138 Aspergillus nidulans 49.63 2.00e-98 352.00
IUUC-Ang-009661 Aspergillus niger 44.94 3.00e-100 358.00
IUUC-Aor-010235 Aspergillus oryzae 40.28 9.00e-85 307.00
IUUC-Ate-010346 Aspergillus terreus 37.50 3.00e-76 279.00
IUUC-Ame-011688 Astyanax mexicanus 89.72 0.00e+00 853.00
IUUC-Bgr-011998 Blumeria graminis 48.04 5.00e-120 424.00
IUUC-Bta-013407 Bos taurus 92.08 0.00e+00 895.00
IUUC-Bci-013977 Botrytis cinerea 48.70 9.00e-118 417.00
IUUC-Bdi-014361 Brachypodium distachyon 53.46 3.00e-137 481.00
IUUC-Bol-016317 Brassica oleracea 50.22 1.00e-117 416.00
IUUC-Bra-017952 Brassica rapa 50.65 1.00e-118 419.00
IUUC-Cel-018491 Caenorhabditis elegans 63.11 0.00e+00 627.00
IUUC-Cja-019134 Callithrix jacchus 90.78 0.00e+00 903.00
IUUC-Cfa-020098 Canis familiaris 90.80 0.00e+00 904.00
IUUC-Cpo-021595 Cavia porcellus 92.08 0.00e+00 894.00
IUUC-Cre-022886 Chlamydomonas reinhardtii 50.00 4.00e-31 126.00
IUUC-Csa-024121 Chlorocebus sabaeus 90.78 0.00e+00 902.00
IUUC-Cho-025057 Choloepus hoffmanni 72.91 1.00e-80 293.00
IUUC-Cin-025473 Ciona intestinalis 63.30 9.00e-66 242.00
IUUC-Csv-025815 Ciona savignyi 80.66 1.00e-118 420.00
IUUC-Cgl-026416 Colletotrichum gloeosporioides 44.71 2.00e-112 399.00
IUUC-Cne-026802 Cryptococcus neoformans 43.37 1.00e-104 373.00
IUUC-Dre-027870 Danio rerio 89.72 0.00e+00 848.00
IUUC-Dno-029655 Dasypus novemcinctus 91.67 0.00e+00 893.00
IUUC-Dor-030762 Dipodomys ordii 92.08 0.00e+00 894.00
IUUC-Dse-031441 Dothistroma septosporum 45.81 4.00e-113 401.00
IUUC-Dme-032101 Drosophila melanogaster 65.13 0.00e+00 628.00
IUUC-Ete-032841 Echinops telfairi 85.18 0.00e+00 860.00
IUUC-Eca-033463 Equus caballus 90.78 0.00e+00 901.00
IUUC-Eeu-034438 Erinaceus europaeus 65.00 2.00e-174 605.00
IUUC-Fca-035774 Felis catus 90.80 0.00e+00 904.00
IUUC-Fal-036988 Ficedula albicollis 90.57 0.00e+00 904.00
IUUC-Fox-037895 Fusarium oxysporum 46.24 4.00e-111 395.00
IUUC-Fso-038450 Fusarium solani 47.53 1.00e-112 400.00
IUUC-Gmo-038874 Gadus morhua 89.43 0.00e+00 833.00
IUUC-Ggr-040115 Gaeumannomyces graminis 44.49 3.00e-107 382.00
IUUC-Gac-041650 Gasterosteus aculeatus 88.63 0.00e+00 867.00
IUUC-Gma-043697 Glycine max 49.68 2.00e-130 459.00
IUUC-Ggo-044707 Gorilla gorilla 84.57 0.00e+00 824.00
IUUC-Hsa-046041 Homo sapiens 90.78 0.00e+00 900.00
IUUC-Hvu-047816 Hordeum vulgare 50.00 4.00e-126 444.00
IUUC-Itr-048945 Ictidomys tridecemlineatus 92.08 0.00e+00 634.00
IUUC-Lpe-051593 Leersia perrieri 54.76 9.00e-137 480.00
IUUC-Loc-052930 Lepisosteus oculatus 87.73 0.00e+00 877.00
IUUC-Lma-053256 Leptosphaeria maculans 47.84 5.00e-117 414.00
IUUC-Laf-053555 Loxodonta africana 90.60 0.00e+00 900.00
IUUC-Mcc-055630 Macaca mulatta 90.78 0.00e+00 902.00
IUUC-Meu-056579 Macropus eugenii 87.65 6.00e-164 570.00
IUUC-Mor-057078 Magnaporthe oryzae 45.20 3.00e-108 385.00
IUUC-Mpo-057607 Magnaporthe poae 39.04 8.00e-88 317.00
IUUC-Mtr-058644 Medicago truncatula 51.42 2.00e-127 449.00
IUUC-Mla-059120 Melampsora laricipopulina 41.15 2.00e-100 359.00
IUUC-Mvi-060429 Microbotryum violaceum 46.67 6.00e-72 265.00
IUUC-Mmr-061313 Microcebus murinus 90.73 0.00e+00 895.00
IUUC-Mdo-062801 Monodelphis domestica 89.35 0.00e+00 904.00
IUUC-Mmu-064424 Mus musculus 91.88 0.00e+00 914.00
IUUC-Mac-065115 Musa acuminata 52.26 4.00e-135 474.00
IUUC-Mpu-065980 Mustela putorius furo 93.11 0.00e+00 792.00
IUUC-Mlu-067007 Myotis lucifugus 92.08 0.00e+00 896.00
IUUC-Nfi-068274 Neosartorya fischeri 41.55 5.00e-94 338.00
IUUC-Ncr-068829 Neurospora crassa 49.25 9.00e-113 400.00
IUUC-Nle-069171 Nomascus leucogenys 92.26 0.00e+00 892.00
IUUC-Opr-070494 Ochotona princeps 84.17 0.00e+00 797.00
IUUC-Ont-072290 Oreochromis niloticus 85.34 0.00e+00 881.00
IUUC-Oan-073099 Ornithorhynchus anatinus 91.04 0.00e+00 884.00
IUUC-Ocu-074642 Oryctolagus cuniculus 90.34 0.00e+00 896.00
IUUC-Oba-075886 Oryza barthii 53.91 2.00e-136 479.00
IUUC-Obr-076220 Oryza brachyantha 53.00 3.00e-136 478.00
IUUC-Ogl-077682 Oryza glaberrima 53.00 4.00e-137 481.00
IUUC-Ogu-078492 Oryza glumaepatula 54.11 1.00e-136 479.00
IUUC-Oin-079956 Oryza indica 53.00 6.00e-137 480.00
IUUC-Olo-080239 Oryza longistaminata 46.56 7.00e-110 392.00
IUUC-Ome-081573 Oryza meridionalis 53.22 4.00e-137 481.00
IUUC-Oni-082975 Oryza nivara 53.00 6.00e-137 480.00
IUUC-Opu-083724 Oryza punctata 53.22 3.00e-137 481.00
IUUC-Oru-084566 Oryza rufipogon 53.00 6.00e-137 480.00
IUUC-Osa-086008 Oryza sativa 53.00 6.00e-137 480.00
IUUC-Ola-086967 Oryzias latipes 90.51 0.00e+00 862.00
IUUC-Olu-087614 Ostreococcus lucimarinus 43.41 5.00e-98 351.00
IUUC-Oga-088047 Otolemur garnettii 74.17 3.00e-168 584.00
IUUC-Oar-089393 Ovis aries 90.80 0.00e+00 904.00
IUUC-Ptr-090561 Pan troglodytes 90.78 0.00e+00 902.00
IUUC-Pan-091812 Papio anubis 90.78 0.00e+00 902.00
IUUC-Psi-093507 Pelodiscus sinensis 91.89 1.00e-156 545.00
IUUC-Pno-095104 Phaeosphaeria nodorum 47.21 2.00e-114 406.00
IUUC-Ppa-095995 Physcomitrella patens 51.94 2.00e-135 476.00
IUUC-Pfo-096754 Poecilia formosa 88.68 0.00e+00 870.00
IUUC-Pab-098053 Pongo abelii 90.78 0.00e+00 902.00
IUUC-Pop-099230 Populus trichocarpa 51.39 1.00e-134 473.00
IUUC-Pca-100407 Procavia capensis 82.77 0.00e+00 803.00
IUUC-Ppe-101699 Prunus persica 50.43 5.00e-129 454.00
IUUC-Pva-103159 Pteropus vampyrus 88.80 0.00e+00 863.00
IUUC-Pgr-103433 Puccinia graminis 42.33 5.00e-107 381.00
IUUC-Ptt-103701 Puccinia triticina 40.20 6.00e-95 341.00
IUUC-Pte-104281 Pyrenophora teres 47.61 1.00e-115 409.00
IUUC-Pyt-104714 Pyrenophora triticirepentis 47.61 2.00e-115 409.00
IUUC-Rno-105531 Rattus norvegicus 89.92 0.00e+00 924.00
IUUC-Sce-106368 Saccharomyces cerevisiae 32.13 2.00e-48 186.00
IUUC-Sha-107093 Sarcophilus harrisii 89.53 0.00e+00 899.00
IUUC-Sja-108004 Schizosaccharomyces japonicus 43.01 4.00e-118 418.00
IUUC-Spo-108018 Schizosaccharomyces pombe 47.05 6.00e-116 410.00
IUUC-Ssl-108460 Sclerotinia sclerotiorum 46.24 1.00e-109 389.00
IUUC-Smo-108892 Selaginella moellendorffii 51.97 9.00e-134 469.00
IUUC-Sit-110782 Setaria italica 52.64 2.00e-140 492.00
IUUC-Sly-111308 Solanum lycopersicum 51.67 8.00e-137 480.00
IUUC-Stu-112447 Solanum tuberosum 52.28 2.00e-136 478.00
IUUC-Sar-113352 Sorex araneus 86.19 0.00e+00 719.00
IUUC-Sbi-114806 Sorghum bicolor 53.39 4.00e-139 488.00
IUUC-Sre-115059 Sporisorium reilianum 39.77 3.00e-92 332.00
IUUC-Ssc-115677 Sus scrofa 88.08 0.00e+00 639.00
IUUC-Tru-118478 Takifugu rubripes 88.41 0.00e+00 870.00
IUUC-Tsy-119082 Tarsius syrichta 80.71 0.00e+00 676.00
IUUC-Tni-120419 Tetraodon nigroviridis 86.81 0.00e+00 845.00
IUUC-Tca-121294 Theobroma cacao 50.74 5.00e-135 474.00
IUUC-Tre-121962 Trichoderma reesei 45.91 7.00e-106 377.00
IUUC-Tvi-122280 Trichoderma virens 46.55 5.00e-113 401.00
IUUC-Tae-125873 Triticum aestivum 51.59 6.00e-138 484.00
IUUC-Tur-126551 Triticum urartu 51.59 1.00e-137 483.00
IUUC-Tme-126959 Tuber melanosporum 48.06 8.00e-119 420.00
IUUC-Tbe-127737 Tupaia belangeri 93.36 0.00e+00 857.00
IUUC-Ttr-129211 Tursiops truncatus 89.71 3.00e-142 498.00
IUUC-Uma-129591 Ustilago maydis 39.28 3.00e-96 346.00
IUUC-Vda-129674 Verticillium dahliae 44.30 3.00e-99 355.00
IUUC-Vpa-130793 Vicugna pacos 86.50 0.00e+00 790.00
IUUC-Xtr-132430 Xenopus tropicalis 88.27 0.00e+00 874.00
IUUC-Xma-133515 Xiphophorus maculatus 88.53 0.00e+00 860.00
IUUC-Yli-134488 Yarrowia lipolytica 38.60 2.00e-80 292.00
IUUC-Zma-134748 Zea mays 54.51 2.00e-139 488.00
Created Date 25-Jun-2017

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