iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121387

Ensembl Protein ID

EOY27080

UniProt Accession

A0A061GB15; A0A061GB15_THECC

Genbank Protein ID

EOY27080.1

Protein Name

SKP1-like 4

Genbank Nucleotide ID

CM001884

Gene Name

TCM_029015

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_029015	EOY27080	EOY27080

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.30e-31	109.4	103	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           +sLLdl c+tVadmikgktpeeiRktFnienDftpeEe+++R+EnqWA
   Q: 103  QSLLDLICQTVADMIKGKTPEEIRKTFNIENDFTPEEEEEIRRENQWA 150
           79*********************************************9 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MASTSKKIML RSSDGKTVEV EEAVAVQLLT IKHMIEDDCA DNEIPIPNVT SEILAKVLEY 60
CKKHVDKGKM GEDELKAWDA DFVKVDQNIL YHLVLAANYL NIQSLLDLIC QTVADMIKGK 120

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Nucleotide Sequence
(Fasta)

AATATTATAA TACAAGATTT CTTTTGTGCT AATAGTCTAT CGGAGATATT TAAGAATTTT 60
GTTATCTCTC TCGGGTTTGT GTTAGCAGCG TGAGAATTTT AGAAGAAGCA ATGGCGTCGA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence