iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016457

Ensembl Protein ID

Bo4g043800.1

UniProt Accession

A0A0D3BSG3; A0A0D3BSG3_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g043800	Bo4g043800.1	Bo4g043800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-14	54.5	64	133
E3 adaptor/Cullin RING/DCX/DWD	1.90e-25	89.3	327	357
UBD/Beta-Prp	4.50e-59	201.6	285	491

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           + ++C+Is+e+++ Pvv+  sG  ++++ Ie +++++gk cPvt++plt +d+vP ++ + +  + +++ s
   Q: 64   PTMNCAISGEVPEVPVVSTkSGLLFEKRLIESHISDYGK-CPVTGEPLTIDDIVPIKSGKVIKPKLLHTAS 133
           6789*************999*******************.******************9999888877765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +vt+++f  d +l++++s D+t++vW+
   Q: 327  GHSKKVTSVKFvGDsDLVLTASADKTVRVWR 357
           8***********666***************6 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw.dls..tgkcvhtlkghedsvlsls 101
           ++k  i+++++  +k+++atg+ d+t  ++d  +g+ l++l gh+++vt+vkf  d+++ +t+s D+t++vw d    ++ c htl+ h+++v++++
   Q: 285  TNKPGICSMDILHSKDVIATGGIDATAVIFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRVWrDSGdgQYACGHTLNDHSEEVRAVT 381
           4455566666666777777777777777777777777777777777777777777777777777777777775333455666677777777777777 PP
   S: 102  fspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvs 197
           ++++++++vs+s d+t   +dl++g cl +  ++ ++   + +++hpdg +l +G+  ++v++Wd+k++  + ++ g ht+ v+s+sf++ng +l++
   Q: 382  VHATNKYFVSASLDSTWCFYDLSSGLCLAKvADDSEKVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVARFDG-HTGEVTSISFSENGYFLAT 477
           77777777777777777777777777776655555555566667777777777777777777777777777777766.7777777777777766666 PP
   S: 198  gsldgtvklwdlqtg 212
           +++dg vklwdl++ 
   Q: 478  AAEDG-VKLWDLRKL 491
           66665.677776643 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

DPLNYLPLRV CSPLSLSLST NFPASAILIS SAGPEKIKPY LRRSKGLPLH PNYSRVVVFS 60
SLFPTMNCAI SGEVPEVPVV STKSGLLFEK RLIESHISDY GKCPVTGEPL TIDDIVPIKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCCCCTTA ATTACCTACC ACTGAGAGTG TGTAGTCCTC TCTCTCTCTC TCTCTCCACC 60
AATTTCCCGG CCTCCGCGAT TTTGATTAGT AGCGCCGGAC CGGAGAAGAT AAAACCCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007879	Ashbya gossypii	27.11	7.00e-33	134.00
IUUC-Ang-009746	Aspergillus niger	36.00	5.00e-67	248.00
IUUC-Ate-010412	Aspergillus terreus	33.62	2.00e-59	222.00
IUUC-Bra-017650	Brassica rapa	98.48	0.00e+00	1070.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	45.45	3.00e-128	451.00
IUUC-Cin-025699	Ciona intestinalis	45.68	5.00e-104	370.00
IUUC-Csv-026128	Ciona savignyi	43.40	3.00e-114	405.00
IUUC-Sre-115134	Sporisorium reilianum	35.61	2.00e-82	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence