iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129828

Ensembl Protein ID

EGY20292

UniProt Accession

G2WVG7; G2WVG7_VERDV

Genbank Protein ID

EGY20292.1

Protein Name

Coatomer subunit alpha

Genbank Nucleotide ID

DS572697

Gene Name

VDAG_02308

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_02308	EGY20292	EGY20292

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-33	111.5	57	93
UBD/Beta-Prp	3.10e-77	258.8	9	335

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  + +l+vsG+dD +ikvW++ t ++l
   Q: 57   HDGPVRGIDFhKTqPLFVSGGDDYKIKVWSYQTRRCL 93
           99*********4459***************9999887 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
            t +++++s+ + ++f+p++++++++  ++ti++wd+++g+l+ ++++h+++v+ ++f+++++++v+g++D+ ikvw+++t+ c+ tl+gh d+v+++ f+
   Q: 9    LTKFESKSSRAKGIAFHPKRPWILVALHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHKTQPLFVSGGDDYKIKVWSYQTRRCLFTLSGHLDYVRTVFFH 109
           67889999********************************************************************************************* PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...............................ktgkllr 173
            +  +++s s+d+tir+w++++++ +  t +gh++ ++c+++hp+++l+vs+slD+ vr+Wd+                               +t+ +++
   Q: 110  HELPWIISSSDDQTIRIWNWQNRSLIC-TMTGHNHYTMCAQFHPKEDLVVSASLDQSVRVWDIsglrkkhsaptsmtfedqvaranqnqadmfgNTDAVVK 209
           **************************9.*********************************************************9999999977777777 PP
   S: 174  tltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav 272
              +gh++ v++++f+++++ +vs+++d+ vklw +++++   v+t++gh +n +   f+p++++++s+++D+++r+Wdl +++ ++t++++n++++ +a+
   Q: 210  FVLEGHDRGVNWVAFHPTMPLIVSAGDDRLVKLWRMSETKAweVDTCRGHFQNASGCLFHPHQDLILSVGEDKTVRVWDLNKRTAVQTFKRENDRFWVIAA 310
           66777********************************888778********************************************************** PP
   S: 273  lsfgdnvlvlgsedskvniwklkknep 299
            +++ n +++g  d+ v+++kl++++p
   Q: 311  -HPEINLFAAG-HDNGVMVFKLERERP 335
           .6666555555.478*******98775 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MSASGNNMLT KFESKSSRAK GIAFHPKRPW ILVALHSSTI QLWDYRMGTL IDRFEEHDGP 60
VRGIDFHKTQ PLFVSGGDDY KIKVWSYQTR RCLFTLSGHL DYVRTVFFHH ELPWIISSSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCCT CGGGCAATAA CATGTTGACC AAGGTACATC GCATCCATCA ATGCAGCATC 60
TTCTCAGGGG TCGCTTTACT TACTGTATTG TAGTTCGAGT CAAAGTCTTC GCGCGCAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

KEGG

vda:VDAG_02308

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000064	Aegilops tauschii	46.59	0.00e+00	1107.00
IUUC-Aml-001758	Ailuropoda melanoleuca	48.60	0.00e+00	1186.00
IUUC-Atr-002493	Amborella trichopoda	55.20	0.00e+00	937.00
IUUC-Apl-003385	Anas platyrhynchos	43.72	0.00e+00	877.00
IUUC-Aca-005154	Anolis carolinensis	72.82	2.00e-93	333.00
IUUC-Aly-006020	Arabidopsis lyrata	53.57	0.00e+00	934.00
IUUC-Ath-007360	Arabidopsis thaliana	54.05	0.00e+00	941.00
IUUC-Ago-007992	Ashbya gossypii	48.91	0.00e+00	1169.00
IUUC-Acl-008027	Aspergillus clavatus	73.93	0.00e+00	1846.00
IUUC-Afl-008644	Aspergillus flavus	74.42	0.00e+00	1847.00
IUUC-Afu-008964	Aspergillus fumigatus	75.49	0.00e+00	1882.00
IUUC-Ani-009379	Aspergillus nidulans	80.31	0.00e+00	1447.00
IUUC-Ang-009756	Aspergillus niger	74.67	0.00e+00	1871.00
IUUC-Aor-010174	Aspergillus oryzae	74.34	0.00e+00	1844.00
IUUC-Ate-010302	Aspergillus terreus	74.50	0.00e+00	1902.00
IUUC-Ame-011229	Astyanax mexicanus	55.14	0.00e+00	989.00
IUUC-Bgr-012300	Blumeria graminis	74.35	0.00e+00	1875.00
IUUC-Bta-012524	Bos taurus	48.95	0.00e+00	1180.00
IUUC-Bci-013781	Botrytis cinerea	80.92	0.00e+00	2021.00
IUUC-Bdi-014549	Brachypodium distachyon	46.82	0.00e+00	1093.00
IUUC-Bol-015925	Brassica oleracea	54.62	0.00e+00	939.00
IUUC-Bra-016978	Brassica rapa	54.00	0.00e+00	934.00
IUUC-Cel-018115	Caenorhabditis elegans	54.44	0.00e+00	878.00
IUUC-Cja-019107	Callithrix jacchus	48.12	0.00e+00	1170.00
IUUC-Cfa-020675	Canis familiaris	48.30	0.00e+00	1158.00
IUUC-Cpo-021813	Cavia porcellus	48.95	0.00e+00	1195.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	55.36	0.00e+00	976.00
IUUC-Csa-023523	Chlorocebus sabaeus	49.04	0.00e+00	1200.00
IUUC-Cho-024704	Choloepus hoffmanni	36.20	7.00e-138	483.00
IUUC-Cin-025572	Ciona intestinalis	47.30	0.00e+00	1130.00
IUUC-Csv-025864	Ciona savignyi	53.64	0.00e+00	928.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	86.90	0.00e+00	2120.00
IUUC-Cne-027053	Cryptococcus neoformans	54.07	0.00e+00	1293.00
IUUC-Cme-027222	Cyanidioschyzon merolae	37.44	4.00e-138	484.00
IUUC-Dre-027421	Danio rerio	48.35	0.00e+00	1180.00
IUUC-Dno-029303	Dasypus novemcinctus	48.91	0.00e+00	1195.00
IUUC-Dor-030290	Dipodomys ordii	46.67	4.00e-147	514.00
IUUC-Dse-031543	Dothistroma septosporum	72.81	0.00e+00	1768.00
IUUC-Dme-031945	Drosophila melanogaster	55.32	0.00e+00	937.00
IUUC-Ete-032873	Echinops telfairi	53.79	0.00e+00	929.00
IUUC-Eca-033773	Equus caballus	48.15	0.00e+00	1150.00
IUUC-Eeu-034874	Erinaceus europaeus	36.87	2.00e-161	561.00
IUUC-Fca-035739	Felis catus	48.28	0.00e+00	1170.00
IUUC-Fal-037263	Ficedula albicollis	45.26	0.00e+00	1051.00
IUUC-Fox-037738	Fusarium oxysporum	84.51	0.00e+00	2150.00
IUUC-Fso-038153	Fusarium solani	84.92	0.00e+00	2120.00
IUUC-Gmo-039602	Gadus morhua	46.32	0.00e+00	1087.00
IUUC-Ggr-039931	Gaeumannomyces graminis	82.90	0.00e+00	2038.00
IUUC-Gga-040590	Gallus gallus	48.71	0.00e+00	1194.00
IUUC-Gac-041318	Gasterosteus aculeatus	47.44	0.00e+00	1152.00
IUUC-Gma-043894	Glycine max	46.43	0.00e+00	1098.00
IUUC-Ggo-045029	Gorilla gorilla	48.68	0.00e+00	1191.00
IUUC-Hsa-046078	Homo sapiens	48.76	0.00e+00	1194.00
IUUC-Hvu-047556	Hordeum vulgare	47.30	0.00e+00	1098.00
IUUC-Itr-048881	Ictidomys tridecemlineatus	39.91	1.00e-180	625.00
IUUC-Kpa-049256	Komagataella pastoris	51.95	0.00e+00	1297.00
IUUC-Lch-049706	Latimeria chalumnae	48.06	0.00e+00	1162.00
IUUC-Lpe-051316	Leersia perrieri	55.52	0.00e+00	954.00
IUUC-Loc-051867	Lepisosteus oculatus	38.90	0.00e+00	789.00
IUUC-Lma-053138	Leptosphaeria maculans	73.83	0.00e+00	1867.00
IUUC-Laf-053510	Loxodonta africana	48.66	0.00e+00	1197.00
IUUC-Mcc-055836	Macaca mulatta	48.80	0.00e+00	1189.00
IUUC-Meu-056238	Macropus eugenii	52.06	0.00e+00	713.00
IUUC-Mor-057172	Magnaporthe oryzae	83.95	0.00e+00	2127.00
IUUC-Mpo-057300	Magnaporthe poae	82.06	0.00e+00	2040.00
IUUC-Mtr-058248	Medicago truncatula	46.02	0.00e+00	1103.00
IUUC-Mla-059019	Melampsora laricipopulina	54.76	0.00e+00	1352.00
IUUC-Mga-059499	Meleagris gallopavo	48.64	0.00e+00	1189.00
IUUC-Mvi-060336	Microbotryum violaceum	62.54	0.00e+00	1125.00
IUUC-Mmr-061102	Microcebus murinus	48.36	0.00e+00	1180.00
IUUC-Mdo-062594	Monodelphis domestica	48.80	0.00e+00	1201.00
IUUC-Mmu-063736	Mus musculus	48.48	0.00e+00	1187.00
IUUC-Mac-065272	Musa acuminata	44.19	0.00e+00	1002.00
IUUC-Mpu-066701	Mustela putorius furo	48.23	0.00e+00	1187.00
IUUC-Mlu-067392	Myotis lucifugus	48.21	0.00e+00	1190.00
IUUC-Nfi-068270	Neosartorya fischeri	74.67	0.00e+00	1860.00
IUUC-Ncr-068892	Neurospora crassa	83.74	0.00e+00	2086.00
IUUC-Nle-069634	Nomascus leucogenys	60.60	0.00e+00	878.00
IUUC-Opr-070952	Ochotona princeps	36.32	4.00e-156	544.00
IUUC-Ont-072488	Oreochromis niloticus	46.94	0.00e+00	1148.00
IUUC-Ocu-074211	Oryctolagus cuniculus	48.95	0.00e+00	1192.00
IUUC-Oba-075761	Oryza barthii	55.64	0.00e+00	955.00
IUUC-Obr-076429	Oryza brachyantha	54.56	0.00e+00	951.00
IUUC-Ogl-077364	Oryza glaberrima	55.64	0.00e+00	955.00
IUUC-Ogu-078257	Oryza glumaepatula	55.64	0.00e+00	953.00
IUUC-Oin-079274	Oryza indica	55.52	0.00e+00	953.00
IUUC-Olo-080466	Oryza longistaminata	55.73	0.00e+00	944.00
IUUC-Ome-081993	Oryza meridionalis	57.87	0.00e+00	935.00
IUUC-Oni-082874	Oryza nivara	55.64	0.00e+00	955.00
IUUC-Opu-083885	Oryza punctata	55.64	0.00e+00	955.00
IUUC-Oru-084274	Oryza rufipogon	55.52	0.00e+00	953.00
IUUC-Osa-085565	Oryza sativa	55.52	0.00e+00	953.00
IUUC-Ola-086921	Oryzias latipes	47.52	0.00e+00	1148.00
IUUC-Olu-087639	Ostreococcus lucimarinus	47.40	0.00e+00	1123.00
IUUC-Oga-087991	Otolemur garnettii	46.53	0.00e+00	1118.00
IUUC-Oar-089590	Ovis aries	49.04	0.00e+00	1193.00
IUUC-Ptr-090808	Pan troglodytes	48.68	0.00e+00	1192.00
IUUC-Pan-092475	Papio anubis	48.67	0.00e+00	1187.00
IUUC-Psi-093044	Pelodiscus sinensis	46.70	0.00e+00	928.00
IUUC-Pno-094839	Phaeosphaeria nodorum	72.83	0.00e+00	1773.00
IUUC-Ppa-095254	Physcomitrella patens	49.47	0.00e+00	1164.00
IUUC-Pfo-097493	Poecilia formosa	47.82	0.00e+00	1154.00
IUUC-Pab-098497	Pongo abelii	48.95	0.00e+00	1199.00
IUUC-Pop-099992	Populus trichocarpa	47.97	0.00e+00	1107.00
IUUC-Pca-100413	Procavia capensis	53.58	0.00e+00	628.00
IUUC-Ppe-101899	Prunus persica	47.04	0.00e+00	1087.00
IUUC-Pva-102126	Pteropus vampyrus	65.68	1.00e-177	615.00
IUUC-Pgr-103376	Puccinia graminis	54.44	0.00e+00	1353.00
IUUC-Ptt-103978	Puccinia triticina	49.23	0.00e+00	1140.00
IUUC-Pte-104126	Pyrenophora teres	81.55	0.00e+00	1434.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	72.13	0.00e+00	1025.00
IUUC-Rno-105428	Rattus norvegicus	49.20	0.00e+00	1197.00
IUUC-Sce-106464	Saccharomyces cerevisiae	48.86	0.00e+00	1163.00
IUUC-Sha-107301	Sarcophilus harrisii	48.50	0.00e+00	1169.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	50.98	0.00e+00	1293.00
IUUC-Spo-108217	Schizosaccharomyces pombe	53.69	0.00e+00	1353.00
IUUC-Ssl-108643	Sclerotinia sclerotiorum	80.67	0.00e+00	2013.00
IUUC-Smo-109582	Selaginella moellendorffii	55.69	0.00e+00	978.00
IUUC-Sit-109697	Setaria italica	46.38	0.00e+00	1105.00
IUUC-Sly-111759	Solanum lycopersicum	45.93	0.00e+00	1092.00
IUUC-Stu-112564	Solanum tuberosum	45.77	0.00e+00	1091.00
IUUC-Sar-113313	Sorex araneus	36.55	4.00e-152	530.00
IUUC-Sbi-114388	Sorghum bicolor	54.00	0.00e+00	950.00
IUUC-Sre-115209	Sporisorium reilianum	61.77	0.00e+00	1102.00
IUUC-Ssc-115933	Sus scrofa	48.95	0.00e+00	1194.00
IUUC-Tgu-117109	Taeniopygia guttata	40.91	3.00e-82	297.00
IUUC-Tru-117772	Takifugu rubripes	47.44	0.00e+00	1138.00
IUUC-Tsy-119105	Tarsius syrichta	49.04	0.00e+00	947.00
IUUC-Tni-120556	Tetraodon nigroviridis	36.96	0.00e+00	734.00
IUUC-Tca-121545	Theobroma cacao	55.40	0.00e+00	953.00
IUUC-Tre-121951	Trichoderma reesei	82.51	0.00e+00	2027.00
IUUC-Tvi-122359	Trichoderma virens	82.17	0.00e+00	2061.00
IUUC-Tae-123611	Triticum aestivum	46.59	0.00e+00	1107.00
IUUC-Tur-126754	Triticum urartu	46.72	0.00e+00	1103.00
IUUC-Tme-127170	Tuber melanosporum	72.94	0.00e+00	1867.00
IUUC-Tbe-127882	Tupaia belangeri	63.78	4.00e-122	431.00
IUUC-Ttr-128217	Tursiops truncatus	47.17	0.00e+00	1124.00
IUUC-Uma-129337	Ustilago maydis	61.29	0.00e+00	1093.00
IUUC-Vpa-130537	Vicugna pacos	48.56	0.00e+00	1179.00
IUUC-Vvi-130958	Vitis vinifera	54.38	0.00e+00	949.00
IUUC-Xtr-132857	Xenopus tropicalis	46.81	0.00e+00	1107.00
IUUC-Xma-133138	Xiphophorus maculatus	47.90	0.00e+00	1157.00
IUUC-Yli-134399	Yarrowia lipolytica	61.68	0.00e+00	1057.00
IUUC-Zma-135612	Zea mays	46.65	0.00e+00	1101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence