iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mga-059358

Ensembl Protein ID

ENSMGAP00000000890.1

UniProt Accession

G1MRP8; G1MRP8_MELGA

Protein Name

Uncharacterized protein

Gene Name

KDM5B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000001393.1	ENSMGAT00000001537.1	ENSMGAP00000000890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.70e-21	74.8	243	289

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vCl+Cg+g +++  l+ C+ C++ +H  Cl ++   ++p+ + w Cp+C 
   Q: 243  VCLLCGSGNDED-RLLLCDGCDDSYHTFCLIPP-LHDVPKGD-WRCPQCL 289
           8********988.6*******************.*******7.******5 PP

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

DWQPPFACDV DKLHFTPRIQ RLNELEAQTR VKLNFLDQIA KFWELQGCTL KIPHVERKIL 60
DLFQLNRLVA EEGGFDVVCK ERKWTKIATR MGFAPGKAVG SHIRAHYERI LYPYNLFQSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCAGGACTG GCAGCCTCCG TTTGCATGTG ATGTTGATAA ACTTCACTTC ACGCCGAGGA 60
TCCAGCGGCT CAATGAGTTG GAGGTAAGCT GCAAAGCCAC GGGTTGCCCC CTCTTCGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0034648--F:histone demethylase activity (H3-dimethyl-K4 specific)
GO:0034647--F:histone demethylase activity (H3-trimethyl-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0010628--P:positive regulation of gene expression
GO:0033601--P:positive regulation of mammary gland epithelial cell proliferation
GO:0009791--P:post-embryonic development
GO:2000864--P:regulation of estradiol secretion
GO:0007338--P:single fertilization
GO:0061038--P:uterus morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	34.06	1.00e-94	341.00
IUUC-Aml-001963	Ailuropoda melanoleuca	83.23	0.00e+00	2402.00
IUUC-Atr-002595	Amborella trichopoda	32.38	1.00e-105	378.00
IUUC-Apl-003770	Anas platyrhynchos	93.36	0.00e+00	2361.00
IUUC-Aca-004867	Anolis carolinensis	81.55	0.00e+00	2432.00
IUUC-Acl-008162	Aspergillus clavatus	30.25	4.00e-112	399.00
IUUC-Afl-008625	Aspergillus flavus	29.64	5.00e-108	386.00
IUUC-Afu-008796	Aspergillus fumigatus	30.23	7.00e-113	402.00
IUUC-Ani-009139	Aspergillus nidulans	31.76	5.00e-113	402.00
IUUC-Aor-010155	Aspergillus oryzae	29.64	5.00e-108	386.00
IUUC-Ate-010453	Aspergillus terreus	29.69	5.00e-108	386.00
IUUC-Ame-010620	Astyanax mexicanus	61.25	0.00e+00	1820.00
IUUC-Bgr-012241	Blumeria graminis	29.35	2.00e-106	380.00
IUUC-Bta-012733	Bos taurus	80.86	0.00e+00	2339.00
IUUC-Bci-013992	Botrytis cinerea	34.99	4.00e-108	386.00
IUUC-Bdi-014050	Brachypodium distachyon	29.11	8.00e-104	372.00
IUUC-Bol-015336	Brassica oleracea	35.25	3.00e-15	78.20
IUUC-Bra-017998	Brassica rapa	34.09	7.00e-14	73.90
IUUC-Cja-019050	Callithrix jacchus	83.02	0.00e+00	2415.00
IUUC-Cfa-021015	Canis familiaris	83.36	0.00e+00	2397.00
IUUC-Cpo-022340	Cavia porcellus	83.09	0.00e+00	2367.00
IUUC-Csa-023441	Chlorocebus sabaeus	83.36	0.00e+00	2401.00
IUUC-Cho-024823	Choloepus hoffmanni	88.60	0.00e+00	1472.00
IUUC-Cin-025321	Ciona intestinalis	43.57	0.00e+00	926.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	31.05	2.00e-112	401.00
IUUC-Cne-026851	Cryptococcus neoformans	29.41	2.00e-110	394.00
IUUC-Dre-027707	Danio rerio	60.99	0.00e+00	1746.00
IUUC-Dno-028978	Dasypus novemcinctus	83.09	0.00e+00	2402.00
IUUC-Dor-030854	Dipodomys ordii	74.37	0.00e+00	1651.00
IUUC-Dse-031479	Dothistroma septosporum	29.20	2.00e-104	374.00
IUUC-Dme-032021	Drosophila melanogaster	43.84	0.00e+00	991.00
IUUC-Ete-032760	Echinops telfairi	80.24	0.00e+00	1637.00
IUUC-Eca-034370	Equus caballus	83.49	0.00e+00	2336.00
IUUC-Eeu-035012	Erinaceus europaeus	68.44	0.00e+00	1661.00
IUUC-Fca-035494	Felis catus	83.69	0.00e+00	2407.00
IUUC-Fal-037631	Ficedula albicollis	90.69	0.00e+00	2649.00
IUUC-Fox-037694	Fusarium oxysporum	31.72	1.00e-98	355.00
IUUC-Fso-038127	Fusarium solani	30.40	4.00e-109	389.00
IUUC-Gmo-039522	Gadus morhua	57.58	0.00e+00	1628.00
IUUC-Ggr-039929	Gaeumannomyces graminis	32.55	1.00e-101	365.00
IUUC-Gga-040802	Gallus gallus	96.80	0.00e+00	2740.00
IUUC-Gac-041563	Gasterosteus aculeatus	60.43	0.00e+00	1746.00
IUUC-Gma-042675	Glycine max	34.00	5.00e-103	369.00
IUUC-Ggo-044856	Gorilla gorilla	68.12	0.00e+00	1825.00
IUUC-Hsa-045888	Homo sapiens	81.32	0.00e+00	2402.00
IUUC-Hvu-047583	Hordeum vulgare	39.00	2.00e-16	81.30
IUUC-Itr-048297	Ictidomys tridecemlineatus	83.56	0.00e+00	2385.00
IUUC-Kpa-049245	Komagataella pastoris	25.62	3.00e-18	87.80
IUUC-Lch-050483	Latimeria chalumnae	65.29	0.00e+00	1939.00
IUUC-Lpe-051537	Leersia perrieri	40.46	1.00e-88	322.00
IUUC-Loc-052550	Lepisosteus oculatus	70.02	0.00e+00	1994.00
IUUC-Laf-053761	Loxodonta africana	82.41	0.00e+00	2374.00
IUUC-Mcc-055505	Macaca mulatta	81.38	0.00e+00	2404.00
IUUC-Meu-056643	Macropus eugenii	50.99	0.00e+00	1190.00
IUUC-Mor-057198	Magnaporthe oryzae	31.18	1.00e-114	407.00
IUUC-Mpo-057317	Magnaporthe poae	33.70	2.00e-104	374.00
IUUC-Mtr-058113	Medicago truncatula	34.35	5.00e-91	330.00
IUUC-Mmr-060863	Microcebus murinus	83.03	0.00e+00	2378.00
IUUC-Mdo-061957	Monodelphis domestica	83.95	0.00e+00	2479.00
IUUC-Mmu-063944	Mus musculus	82.08	0.00e+00	2362.00
IUUC-Mac-065069	Musa acuminata	31.03	3.00e-08	54.70
IUUC-Mpu-066719	Mustela putorius furo	81.73	0.00e+00	2382.00
IUUC-Mlu-068086	Myotis lucifugus	79.65	0.00e+00	2289.00
IUUC-Nfi-068430	Neosartorya fischeri	30.61	5.00e-123	436.00
IUUC-Ncr-068763	Neurospora crassa	30.86	9.00e-112	398.00
IUUC-Nle-069256	Nomascus leucogenys	81.51	0.00e+00	2408.00
IUUC-Opr-071002	Ochotona princeps	51.35	0.00e+00	1217.00
IUUC-Ont-071756	Oreochromis niloticus	60.70	0.00e+00	1771.00
IUUC-Oan-073568	Ornithorhynchus anatinus	85.06	0.00e+00	2484.00
IUUC-Ocu-073961	Oryctolagus cuniculus	81.27	0.00e+00	2341.00
IUUC-Oba-075388	Oryza barthii	31.83	3.00e-72	267.00
IUUC-Obr-076296	Oryza brachyantha	39.05	3.00e-86	314.00
IUUC-Ogl-077886	Oryza glaberrima	38.83	2.00e-16	81.30
IUUC-Ogu-079040	Oryza glumaepatula	28.79	1.00e-71	265.00
IUUC-Oin-079273	Oryza indica	50.00	2.00e-13	68.20
IUUC-Olo-080668	Oryza longistaminata	38.83	6.00e-16	80.50
IUUC-Ome-081764	Oryza meridionalis	39.47	9.00e-89	322.00
IUUC-Oni-083012	Oryza nivara	29.36	1.00e-71	265.00
IUUC-Opu-083164	Oryza punctata	34.14	5.00e-86	313.00
IUUC-Oru-084630	Oryza rufipogon	31.47	1.00e-71	265.00
IUUC-Osa-085487	Oryza sativa	38.83	2.00e-16	81.30
IUUC-Ola-086448	Oryzias latipes	60.05	0.00e+00	1720.00
IUUC-Oga-088501	Otolemur garnettii	78.88	0.00e+00	2035.00
IUUC-Oar-090162	Ovis aries	80.46	0.00e+00	2338.00
IUUC-Ptr-090816	Pan troglodytes	81.51	0.00e+00	2413.00
IUUC-Pan-092764	Papio anubis	83.36	0.00e+00	2402.00
IUUC-Psi-093918	Pelodiscus sinensis	86.38	0.00e+00	2310.00
IUUC-Pma-094137	Petromyzon marinus	55.58	0.00e+00	1179.00
IUUC-Pno-094879	Phaeosphaeria nodorum	30.68	1.00e-112	401.00
IUUC-Pfo-096777	Poecilia formosa	61.34	0.00e+00	1796.00
IUUC-Pab-097854	Pongo abelii	83.11	0.00e+00	1887.00
IUUC-Pca-100241	Procavia capensis	77.51	0.00e+00	1535.00
IUUC-Ppe-101504	Prunus persica	32.88	2.00e-103	370.00
IUUC-Pva-103035	Pteropus vampyrus	77.75	0.00e+00	2000.00
IUUC-Pgr-103434	Puccinia graminis	33.06	2.00e-19	89.70
IUUC-Pte-104195	Pyrenophora teres	30.46	2.00e-113	404.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	30.46	7.00e-114	405.00
IUUC-Rno-105574	Rattus norvegicus	81.02	0.00e+00	2316.00
IUUC-Sce-106207	Saccharomyces cerevisiae	35.59	2.00e-74	273.00
IUUC-Sha-106769	Sarcophilus harrisii	51.58	0.00e+00	1173.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	20.75	6.00e-36	146.00
IUUC-Spo-108283	Schizosaccharomyces pombe	20.86	2.00e-42	168.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	31.53	2.00e-113	404.00
IUUC-Sit-110534	Setaria italica	33.92	7.00e-97	349.00
IUUC-Sly-111298	Solanum lycopersicum	42.66	4.00e-101	363.00
IUUC-Sar-113477	Sorex araneus	82.10	0.00e+00	2169.00
IUUC-Sre-115161	Sporisorium reilianum	30.93	3.00e-110	394.00
IUUC-Ssc-116132	Sus scrofa	85.09	0.00e+00	2125.00
IUUC-Tgu-117452	Taeniopygia guttata	91.69	0.00e+00	2665.00
IUUC-Tru-117561	Takifugu rubripes	62.36	0.00e+00	1631.00
IUUC-Tsy-119271	Tarsius syrichta	81.85	0.00e+00	1883.00
IUUC-Tni-119650	Tetraodon nigroviridis	60.54	0.00e+00	1722.00
IUUC-Tca-121478	Theobroma cacao	41.89	2.00e-102	367.00
IUUC-Tre-122213	Trichoderma reesei	30.94	6.00e-111	395.00
IUUC-Tvi-122263	Trichoderma virens	30.54	7.00e-103	369.00
IUUC-Tae-125894	Triticum aestivum	31.40	2.00e-95	344.00
IUUC-Tur-126632	Triticum urartu	33.38	4.00e-94	340.00
IUUC-Tme-127087	Tuber melanosporum	30.44	4.00e-118	419.00
IUUC-Tbe-127890	Tupaia belangeri	74.34	0.00e+00	1271.00
IUUC-Ttr-128546	Tursiops truncatus	81.30	0.00e+00	1750.00
IUUC-Uma-129590	Ustilago maydis	27.14	6.00e-112	399.00
IUUC-Vda-129733	Verticillium dahliae	29.71	1.00e-105	378.00
IUUC-Vpa-130432	Vicugna pacos	80.14	0.00e+00	1392.00
IUUC-Vvi-131071	Vitis vinifera	31.25	1.00e-81	298.00
IUUC-Xtr-132008	Xenopus tropicalis	70.41	0.00e+00	2058.00
IUUC-Xma-133571	Xiphophorus maculatus	60.62	0.00e+00	1749.00
IUUC-Zma-135829	Zea mays	33.29	8.00e-96	345.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence