iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017269

Ensembl Protein ID

Bra003003.1-P

UniProt Accession

M4CFM1; M4CFM1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003003	Bra003003.1	Bra003003.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-26	91.1	495	529

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           H+d vtc++f   +d++++sGs D ++++W++ ++
   Q: 495  HSDYVTCIQFnpvDDNYFISGSLDAKVRIWSIPDH 529
           9***********766***************98765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MIKMMVMNGR NDVVDEDNDD CFYESLDRVL SSCSCSTSNS DYDSDNPNTS DPIHDPTPTP 60
FPLPSGFELW KSEPESVTER RIRLLRGLGL SDEPDLRFKS RRKGICSSHF ARSVSSDVSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTAAAA TGATGGTGAT GAACGGACGA AACGACGTCG TAGACGAAGA TAACGACGAT 60
TGTTTCTACG AGTCTCTCGA CCGCGTTCTC TCTTCCTGCT CTTGCTCAAC TTCCAACTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000228	Aegilops tauschii	50.55	1.00e-159	556.00
IUUC-Atr-002683	Amborella trichopoda	57.20	7.00e-155	541.00
IUUC-Aly-005741	Arabidopsis lyrata	85.31	0.00e+00	1209.00
IUUC-Ath-007063	Arabidopsis thaliana	85.85	0.00e+00	1190.00
IUUC-Ago-007814	Ashbya gossypii	32.20	9.00e-42	164.00
IUUC-Ang-009627	Aspergillus niger	36.36	3.00e-52	200.00
IUUC-Ate-010263	Aspergillus terreus	37.27	8.00e-55	208.00
IUUC-Ame-011096	Astyanax mexicanus	37.19	6.00e-57	215.00
IUUC-Bci-013651	Botrytis cinerea	32.41	3.00e-59	223.00
IUUC-Bol-015849	Brassica oleracea	95.08	0.00e+00	1316.00
IUUC-Cja-019169	Callithrix jacchus	46.15	3.00e-53	203.00
IUUC-Cin-025347	Ciona intestinalis	36.90	2.00e-57	216.00
IUUC-Cgl-026610	Colletotrichum gloeosporioides	35.73	8.00e-55	208.00
IUUC-Cme-027130	Cyanidioschyzon merolae	36.73	7.00e-45	176.00
IUUC-Dre-028529	Danio rerio	31.91	3.00e-59	223.00
IUUC-Dor-030184	Dipodomys ordii	45.69	1.00e-44	174.00
IUUC-Dse-031178	Dothistroma septosporum	36.14	5.00e-58	219.00
IUUC-Dme-032135	Drosophila melanogaster	31.15	2.00e-62	234.00
IUUC-Ete-032457	Echinops telfairi	27.05	3.00e-39	157.00
IUUC-Eeu-035325	Erinaceus europaeus	36.82	5.00e-39	156.00
IUUC-Fso-038143	Fusarium solani	33.51	1.00e-53	204.00
IUUC-Gmo-039226	Gadus morhua	38.67	2.00e-58	220.00
IUUC-Ggr-039923	Gaeumannomyces graminis	36.16	7.00e-55	209.00
IUUC-Gma-043178	Glycine max	67.28	0.00e+00	803.00
IUUC-Hvu-047755	Hordeum vulgare	51.90	2.00e-165	575.00
IUUC-Itr-048620	Ictidomys tridecemlineatus	32.72	4.00e-60	226.00
IUUC-Lch-049794	Latimeria chalumnae	31.72	2.00e-59	223.00
IUUC-Lpe-050824	Leersia perrieri	51.39	0.00e+00	677.00
IUUC-Loc-052691	Lepisosteus oculatus	32.05	2.00e-60	227.00
IUUC-Lma-053232	Leptosphaeria maculans	34.99	2.00e-55	210.00
IUUC-Meu-056678	Macropus eugenii	26.01	2.00e-40	160.00
IUUC-Mor-057274	Magnaporthe oryzae	35.71	6.00e-54	206.00
IUUC-Mpo-057592	Magnaporthe poae	34.91	2.00e-52	201.00
IUUC-Mtr-058330	Medicago truncatula	61.85	0.00e+00	809.00
IUUC-Mla-059075	Melampsora laricipopulina	34.48	1.00e-31	130.00
IUUC-Mga-059659	Meleagris gallopavo	45.74	1.00e-51	198.00
IUUC-Mdo-062300	Monodelphis domestica	32.72	3.00e-62	233.00
IUUC-Mac-064705	Musa acuminata	58.44	0.00e+00	655.00
IUUC-Mlu-067853	Myotis lucifugus	32.72	3.00e-60	226.00
IUUC-Nfi-068449	Neosartorya fischeri	30.41	5.00e-35	142.00
IUUC-Opr-071139	Ochotona princeps	45.69	1.00e-44	174.00
IUUC-Ont-072128	Oreochromis niloticus	31.93	5.00e-60	225.00
IUUC-Ocu-074311	Oryctolagus cuniculus	32.92	1.00e-61	231.00
IUUC-Oba-075039	Oryza barthii	53.43	1.00e-167	582.00
IUUC-Obr-076635	Oryza brachyantha	51.31	0.00e+00	662.00
IUUC-Ogl-077572	Oryza glaberrima	53.43	3.00e-167	582.00
IUUC-Ogu-078005	Oryza glumaepatula	50.64	0.00e+00	669.00
IUUC-Oin-079138	Oryza indica	49.87	0.00e+00	651.00
IUUC-Olo-080846	Oryza longistaminata	50.30	2.00e-147	516.00
IUUC-Ome-081525	Oryza meridionalis	53.43	1.00e-167	583.00
IUUC-Oni-082452	Oryza nivara	52.13	0.00e+00	707.00
IUUC-Opu-084083	Oryza punctata	47.69	0.00e+00	644.00
IUUC-Oru-085211	Oryza rufipogon	50.84	0.00e+00	669.00
IUUC-Osa-086029	Oryza sativa	53.21	3.00e-167	582.00
IUUC-Ola-086963	Oryzias latipes	30.22	2.00e-51	197.00
IUUC-Pma-094528	Petromyzon marinus	30.27	1.00e-46	181.00
IUUC-Ppa-095792	Physcomitrella patens	40.64	1.00e-106	381.00
IUUC-Pop-099492	Populus trichocarpa	74.12	2.00e-178	618.00
IUUC-Ppe-101184	Prunus persica	69.16	0.00e+00	777.00
IUUC-Pva-102846	Pteropus vampyrus	45.69	1.00e-44	174.00
IUUC-Pte-104369	Pyrenophora teres	34.69	3.00e-55	209.00
IUUC-Pyt-104811	Pyrenophora triticirepentis	34.69	4.00e-55	209.00
IUUC-Sce-106277	Saccharomyces cerevisiae	29.83	8.00e-43	168.00
IUUC-Sja-107954	Schizosaccharomyces japonicus	38.98	2.00e-60	227.00
IUUC-Spo-108181	Schizosaccharomyces pombe	38.87	3.00e-57	216.00
IUUC-Smo-108748	Selaginella moellendorffii	38.13	1.00e-114	407.00
IUUC-Sit-110585	Setaria italica	49.32	0.00e+00	629.00
IUUC-Sly-111804	Solanum lycopersicum	59.61	0.00e+00	807.00
IUUC-Stu-111949	Solanum tuberosum	69.53	0.00e+00	818.00
IUUC-Sbi-114330	Sorghum bicolor	50.57	5.00e-174	604.00
IUUC-Sre-114996	Sporisorium reilianum	31.81	3.00e-41	163.00
IUUC-Tgu-116614	Taeniopygia guttata	32.40	8.00e-60	225.00
IUUC-Tru-117808	Takifugu rubripes	40.19	1.00e-57	218.00
IUUC-Tca-121052	Theobroma cacao	70.02	0.00e+00	815.00
IUUC-Tre-122175	Trichoderma reesei	32.57	3.00e-52	199.00
IUUC-Tvi-122654	Trichoderma virens	32.71	1.00e-53	204.00
IUUC-Tae-125754	Triticum aestivum	55.32	2.00e-175	609.00
IUUC-Tur-126660	Triticum urartu	52.91	3.00e-174	605.00
IUUC-Tme-126882	Tuber melanosporum	33.87	1.00e-61	231.00
IUUC-Tbe-127531	Tupaia belangeri	46.19	7.00e-44	172.00
IUUC-Vpa-130109	Vicugna pacos	45.69	1.00e-44	174.00
IUUC-Vvi-130908	Vitis vinifera	68.53	0.00e+00	798.00
IUUC-Yli-134376	Yarrowia lipolytica	31.31	7.00e-51	195.00
IUUC-Zma-135701	Zea mays	55.56	3.00e-165	575.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence