iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049640

Ensembl Protein ID

ENSLACP00000015604.1

UniProt Accession

H3B133; H3B133_LATCH

Genbank Protein ID

ENSLACP00000015604

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Genbank Nucleotide ID

AFYH01076819

Gene Name

BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000013738.1	ENSLACT00000015712.1	ENSLACP00000015604.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-12	47.1	425	463

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v+c++  ++   l+sGsdD+t++ W++++ ++ k
   Q: 425  GHANLVRCISVsPSgQWLASGSDDCTVRFWEVSSARCMK 463
           8**********966699*****************99987 PP

Organism

Latimeria chalumnae

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MKRPAEEEAD NEQLPVFIEA GSVGSDAEDG DLTDSEESVY SGLEDSGSDS SDDDEKEEEV 60
EEEEQQGEDD SSACEGSDDS GVGEKAVTRQ SKDKSSKKKM KTRKLSQRKE REEEEEIGDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNTTTTTTTT TTTTAAATAG ACAGGTTTAT GGGTTTTGAG GGGAGGTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

lcm:102350631

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	41.82	2.00e-127	449.00
IUUC-Aml-001507	Ailuropoda melanoleuca	68.70	0.00e+00	889.00
IUUC-Atr-003141	Amborella trichopoda	41.96	9.00e-86	310.00
IUUC-Apl-003545	Anas platyrhynchos	72.52	0.00e+00	868.00
IUUC-Aly-005649	Arabidopsis lyrata	46.83	1.00e-160	560.00
IUUC-Ath-007625	Arabidopsis thaliana	46.92	1.00e-158	553.00
IUUC-Ago-007958	Ashbya gossypii	44.41	2.00e-165	576.00
IUUC-Acl-008344	Aspergillus clavatus	42.64	2.00e-143	503.00
IUUC-Afl-008616	Aspergillus flavus	42.35	8.00e-145	507.00
IUUC-Afu-009083	Aspergillus fumigatus	42.97	1.00e-140	493.00
IUUC-Ani-009365	Aspergillus nidulans	42.05	1.00e-142	500.00
IUUC-Ang-009796	Aspergillus niger	42.23	6.00e-140	491.00
IUUC-Aor-010015	Aspergillus oryzae	42.35	7.00e-145	507.00
IUUC-Ate-010537	Aspergillus terreus	43.49	1.00e-148	520.00
IUUC-Ame-011767	Astyanax mexicanus	79.70	4.00e-130	456.00
IUUC-Bgr-012286	Blumeria graminis	44.24	1.00e-152	533.00
IUUC-Bta-013569	Bos taurus	72.52	0.00e+00	934.00
IUUC-Bci-013820	Botrytis cinerea	42.86	9.00e-143	500.00
IUUC-Bdi-014895	Brachypodium distachyon	46.60	1.00e-160	560.00
IUUC-Bol-016099	Brassica oleracea	46.35	3.00e-160	558.00
IUUC-Bra-017174	Brassica rapa	46.35	2.00e-160	560.00
IUUC-Cel-018201	Caenorhabditis elegans	48.96	3.00e-162	565.00
IUUC-Cja-019009	Callithrix jacchus	63.44	0.00e+00	835.00
IUUC-Cfa-020173	Canis familiaris	67.19	0.00e+00	887.00
IUUC-Cpo-021796	Cavia porcellus	74.31	0.00e+00	953.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	46.15	1.00e-154	540.00
IUUC-Csa-023440	Chlorocebus sabaeus	73.50	0.00e+00	968.00
IUUC-Cin-025782	Ciona intestinalis	59.45	0.00e+00	786.00
IUUC-Csv-026352	Ciona savignyi	60.19	0.00e+00	780.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	38.16	2.00e-114	406.00
IUUC-Cne-027004	Cryptococcus neoformans	44.98	4.00e-173	601.00
IUUC-Cme-027242	Cyanidioschyzon merolae	36.95	4.00e-120	425.00
IUUC-Dre-028658	Danio rerio	81.05	0.00e+00	1082.00
IUUC-Dno-028883	Dasypus novemcinctus	71.94	0.00e+00	944.00
IUUC-Dor-031031	Dipodomys ordii	71.61	0.00e+00	960.00
IUUC-Dse-031443	Dothistroma septosporum	40.18	1.00e-146	513.00
IUUC-Dme-031786	Drosophila melanogaster	54.34	0.00e+00	749.00
IUUC-Eca-033677	Equus caballus	73.98	0.00e+00	957.00
IUUC-Eeu-035310	Erinaceus europaeus	70.00	0.00e+00	764.00
IUUC-Fca-035888	Felis catus	70.94	0.00e+00	938.00
IUUC-Fal-037438	Ficedula albicollis	64.72	0.00e+00	721.00
IUUC-Fox-037973	Fusarium oxysporum	43.72	5.00e-162	564.00
IUUC-Fso-038187	Fusarium solani	42.95	2.00e-159	555.00
IUUC-Gmo-039114	Gadus morhua	68.28	0.00e+00	884.00
IUUC-Ggr-039746	Gaeumannomyces graminis	41.89	2.00e-156	546.00
IUUC-Gga-040631	Gallus gallus	76.99	1.00e-161	562.00
IUUC-Gac-042582	Gasterosteus aculeatus	71.68	0.00e+00	915.00
IUUC-Gma-044215	Glycine max	46.18	8.00e-153	533.00
IUUC-Ggo-045587	Gorilla gorilla	73.42	0.00e+00	967.00
IUUC-Hsa-046319	Homo sapiens	73.50	0.00e+00	967.00
IUUC-Hvu-047526	Hordeum vulgare	46.30	4.00e-154	538.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	73.33	0.00e+00	962.00
IUUC-Kpa-049221	Komagataella pastoris	43.35	1.00e-158	553.00
IUUC-Lpe-051135	Leersia perrieri	43.85	7.00e-142	497.00
IUUC-Loc-051930	Lepisosteus oculatus	85.23	0.00e+00	1103.00
IUUC-Lma-053290	Leptosphaeria maculans	42.97	5.00e-142	498.00
IUUC-Laf-053903	Loxodonta africana	68.08	0.00e+00	855.00
IUUC-Mcc-055471	Macaca mulatta	73.17	0.00e+00	964.00
IUUC-Meu-056190	Macropus eugenii	75.97	0.00e+00	975.00
IUUC-Mor-057135	Magnaporthe oryzae	41.61	2.00e-147	516.00
IUUC-Mpo-057475	Magnaporthe poae	41.73	6.00e-143	501.00
IUUC-Mtr-058689	Medicago truncatula	42.43	2.00e-133	469.00
IUUC-Mla-059149	Melampsora laricipopulina	44.57	6.00e-168	584.00
IUUC-Mga-059645	Meleagris gallopavo	70.49	1.00e-102	365.00
IUUC-Mvi-060485	Microbotryum violaceum	45.07	2.00e-152	534.00
IUUC-Mmr-061674	Microcebus murinus	72.61	0.00e+00	944.00
IUUC-Mdo-062973	Monodelphis domestica	76.10	0.00e+00	987.00
IUUC-Mmu-064180	Mus musculus	73.17	0.00e+00	959.00
IUUC-Mac-064535	Musa acuminata	43.81	1.00e-97	350.00
IUUC-Mpu-066406	Mustela putorius furo	73.01	0.00e+00	956.00
IUUC-Mlu-067795	Myotis lucifugus	73.50	0.00e+00	932.00
IUUC-Nfi-068516	Neosartorya fischeri	42.79	6.00e-134	471.00
IUUC-Ncr-068767	Neurospora crassa	44.36	3.00e-143	502.00
IUUC-Opr-071084	Ochotona princeps	68.93	6.00e-119	420.00
IUUC-Ont-071614	Oreochromis niloticus	73.18	0.00e+00	957.00
IUUC-Oba-075980	Oryza barthii	43.49	7.00e-141	494.00
IUUC-Obr-076799	Oryza brachyantha	46.28	3.00e-158	551.00
IUUC-Ogl-077134	Oryza glaberrima	45.63	7.00e-153	534.00
IUUC-Ogu-078655	Oryza glumaepatula	43.53	6.00e-147	514.00
IUUC-Oin-079654	Oryza indica	45.63	1.00e-152	533.00
IUUC-Olo-080706	Oryza longistaminata	43.49	2.00e-141	496.00
IUUC-Ome-081716	Oryza meridionalis	38.17	5.00e-116	412.00
IUUC-Oni-082508	Oryza nivara	42.56	4.00e-141	495.00
IUUC-Opu-083707	Oryza punctata	43.65	7.00e-142	497.00
IUUC-Oru-084453	Oryza rufipogon	43.49	2.00e-141	496.00
IUUC-Osa-085811	Oryza sativa	45.63	7.00e-153	534.00
IUUC-Ola-087361	Oryzias latipes	75.71	0.00e+00	986.00
IUUC-Oga-088015	Otolemur garnettii	72.36	0.00e+00	976.00
IUUC-Oar-090058	Ovis aries	78.44	6.00e-78	284.00
IUUC-Ptr-090631	Pan troglodytes	69.28	8.00e-126	443.00
IUUC-Pan-092306	Papio anubis	73.54	0.00e+00	967.00
IUUC-Pma-094622	Petromyzon marinus	74.39	0.00e+00	1012.00
IUUC-Pno-094794	Phaeosphaeria nodorum	40.31	3.00e-133	469.00
IUUC-Ppa-095528	Physcomitrella patens	42.46	3.00e-95	342.00
IUUC-Pfo-096682	Poecilia formosa	74.01	0.00e+00	984.00
IUUC-Pab-097939	Pongo abelii	73.36	0.00e+00	870.00
IUUC-Pop-099530	Populus trichocarpa	48.80	8.00e-145	506.00
IUUC-Pca-100333	Procavia capensis	71.38	0.00e+00	935.00
IUUC-Ppe-102078	Prunus persica	45.48	5.00e-152	531.00
IUUC-Pgr-103525	Puccinia graminis	46.69	8.00e-161	560.00
IUUC-Ptt-103929	Puccinia triticina	46.87	4.00e-158	551.00
IUUC-Pte-104029	Pyrenophora teres	42.64	1.00e-153	536.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	42.79	6.00e-154	538.00
IUUC-Rno-105248	Rattus norvegicus	74.47	0.00e+00	971.00
IUUC-Sce-106381	Saccharomyces cerevisiae	42.51	2.00e-160	559.00
IUUC-Sha-106519	Sarcophilus harrisii	75.32	0.00e+00	991.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	41.65	6.00e-142	498.00
IUUC-Spo-108071	Schizosaccharomyces pombe	40.21	3.00e-137	482.00
IUUC-Smo-109604	Selaginella moellendorffii	49.37	2.00e-160	559.00
IUUC-Sit-110551	Setaria italica	46.60	4.00e-155	541.00
IUUC-Sly-110970	Solanum lycopersicum	47.46	2.00e-80	292.00
IUUC-Stu-112593	Solanum tuberosum	46.44	7.00e-154	537.00
IUUC-Sar-113123	Sorex araneus	64.13	3.00e-114	404.00
IUUC-Sbi-113945	Sorghum bicolor	46.28	2.00e-158	552.00
IUUC-Sre-115188	Sporisorium reilianum	44.23	1.00e-159	556.00
IUUC-Ssc-115352	Sus scrofa	72.93	0.00e+00	947.00
IUUC-Tru-117685	Takifugu rubripes	73.60	0.00e+00	971.00
IUUC-Tni-119982	Tetraodon nigroviridis	73.06	0.00e+00	944.00
IUUC-Tca-121664	Theobroma cacao	47.07	3.00e-159	555.00
IUUC-Tre-122229	Trichoderma reesei	43.80	8.00e-142	497.00
IUUC-Tvi-122576	Trichoderma virens	43.28	4.00e-144	504.00
IUUC-Tae-124110	Triticum aestivum	46.46	4.00e-145	508.00
IUUC-Tur-126781	Triticum urartu	42.83	6.00e-124	438.00
IUUC-Tme-127080	Tuber melanosporum	47.72	2.00e-179	622.00
IUUC-Ttr-128514	Tursiops truncatus	70.11	0.00e+00	662.00
IUUC-Uma-129556	Ustilago maydis	42.69	8.00e-152	531.00
IUUC-Vda-129715	Verticillium dahliae	42.72	6.00e-155	541.00
IUUC-Vvi-131211	Vitis vinifera	45.41	2.00e-148	519.00
IUUC-Xma-133883	Xiphophorus maculatus	73.93	0.00e+00	970.00
IUUC-Yli-134438	Yarrowia lipolytica	43.98	1.00e-144	506.00
IUUC-Zma-135341	Zea mays	40.98	3.00e-143	501.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence