iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012585

Ensembl Protein ID

UniProt Accession

P62992; O97577; P02248; P02249; P02250; P0CG52; P62990; P80169; Q01235; Q24K23; Q28169; Q28170; Q29120; Q3T0V5; Q3ZCE3; Q862C1; Q862F4; Q862M4; Q862T5; Q862X8; Q91887; Q91888; RS27A_BOVIN

Genbank Protein ID

AAC77907.1; BAC56381.1; AAI02492.2

Protein Name

Ubiquitin-40S ribosomal protein S27a; Ubiquitin carboxyl extension protein 80; Ubiquitin; 40S ribosomal protein S27a

Genbank Nucleotide ID

AF058700; AB098891; BC102491

Gene Name

RPS27A; UBA80; UBCEP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000015473.5	ENSBTAT00000033091.3	ENSBTAP00000033015.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	3.30e-41	139.5	1	76
ULD/UDP/UBQ/UBQ_PIM	1.40e-29	101.9	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Bos taurus

Functional Description
(View)

Ribosomal protein S27a is part of the 40S ribosomal subunit.

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGAKKR KKKSYTTPKK NKHKRKKVKL AVLKYYKVDE NGKISRLRRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGATTT TCGTGAAGAC CCTGACGGGG AAGACCATCA CTCTCGAGGT ACGGGCCAGG 60
CCGGGGAGAA GCCGCGGCCT GAAGGAGGGA GGGCCTGAGG CGGATTTCTG CACGCGCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0007--Acetylation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0903--Direct protein sequencing
KW-1017--Isopeptide bond
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein
KW-0832--Ubl conjugation
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0022627--C:cytosolic small ribosomal subunit
GO:0070062--C:extracellular exosome
GO:0005615--C:extracellular space
GO:0016020--C:membrane
GO:0043209--C:myelin sheath
GO:0005730--C:nucleolus
GO:0046872--F:metal ion binding
GO:0003723--F:RNA binding
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

bta:286839

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001873	Ailuropoda melanoleuca	100.00	2.00e-68	250.00
IUUC-Atr-003143	Amborella trichopoda	84.21	1.00e-61	228.00
IUUC-Apl-003364	Anas platyrhynchos	89.74	4.00e-60	223.00
IUUC-Aca-005055	Anolis carolinensis	98.72	2.00e-74	270.00
IUUC-Aly-005675	Arabidopsis lyrata	85.53	3.00e-62	230.00
IUUC-Ath-006984	Arabidopsis thaliana	85.53	3.00e-62	230.00
IUUC-Ago-007733	Ashbya gossypii	81.76	2.00e-53	201.00
IUUC-Acl-008099	Aspergillus clavatus	86.18	1.00e-55	208.00
IUUC-Afl-008474	Aspergillus flavus	86.18	2.00e-55	207.00
IUUC-Afu-009021	Aspergillus fumigatus	86.84	6.00e-61	226.00
IUUC-Ani-009265	Aspergillus nidulans	86.18	4.00e-55	206.00
IUUC-Ang-009629	Aspergillus niger	85.53	2.00e-55	207.00
IUUC-Aor-009936	Aspergillus oryzae	86.18	2.00e-55	207.00
IUUC-Ate-010436	Aspergillus terreus	86.18	2.00e-55	207.00
IUUC-Ame-011421	Astyanax mexicanus	98.72	2.00e-67	248.00
IUUC-Bgr-011984	Blumeria graminis	86.75	2.00e-60	224.00
IUUC-Bci-013920	Botrytis cinerea	86.75	2.00e-55	207.00
IUUC-Bdi-014571	Brachypodium distachyon	84.97	5.00e-56	209.00
IUUC-Bol-016477	Brassica oleracea	83.97	2.00e-62	231.00
IUUC-Cja-019661	Callithrix jacchus	99.36	4.00e-67	246.00
IUUC-Cfa-020795	Canis familiaris	100.00	2.00e-68	250.00
IUUC-Cpo-021905	Cavia porcellus	98.73	5.00e-67	246.00
IUUC-Csa-023120	Chlorocebus sabaeus	100.00	2.00e-68	250.00
IUUC-Cin-025785	Ciona intestinalis	89.74	7.00e-60	222.00
IUUC-Csv-026028	Ciona savignyi	81.17	2.00e-52	197.00
IUUC-Cgl-026423	Colletotrichum gloeosporioides	79.22	1.00e-49	188.00
IUUC-Dre-028206	Danio rerio	98.72	2.00e-67	248.00
IUUC-Dno-029073	Dasypus novemcinctus	100.00	2.00e-68	251.00
IUUC-Dor-030658	Dipodomys ordii	100.00	6.00e-41	158.00
IUUC-Dse-031483	Dothistroma septosporum	83.87	2.00e-59	221.00
IUUC-Dme-032068	Drosophila melanogaster	91.03	2.00e-59	221.00
IUUC-Ete-032297	Echinops telfairi	70.51	5.00e-58	216.00
IUUC-Eca-034346	Equus caballus	100.00	1.00e-68	251.00
IUUC-Eeu-035081	Erinaceus europaeus	89.72	4.00e-37	145.00
IUUC-Fca-035555	Felis catus	100.00	2.00e-68	250.00
IUUC-Fal-037049	Ficedula albicollis	99.36	6.00e-68	249.00
IUUC-Fox-037994	Fusarium oxysporum	87.58	5.00e-61	226.00
IUUC-Fso-038121	Fusarium solani	88.16	2.00e-62	230.00
IUUC-Gmo-039231	Gadus morhua	98.72	2.00e-67	247.00
IUUC-Ggr-039996	Gaeumannomyces graminis	84.42	2.00e-55	207.00
IUUC-Gga-040938	Gallus gallus	99.36	6.00e-68	249.00
IUUC-Gac-041956	Gasterosteus aculeatus	98.72	1.00e-67	248.00
IUUC-Gma-043007	Glycine max	84.42	5.00e-63	233.00
IUUC-Ggo-044980	Gorilla gorilla	100.00	2.00e-68	250.00
IUUC-Hsa-046329	Homo sapiens	100.00	2.00e-68	250.00
IUUC-Itr-047994	Ictidomys tridecemlineatus	100.00	2.00e-68	250.00
IUUC-Kpa-049159	Komagataella pastoris	82.24	3.00e-56	210.00
IUUC-Lch-050032	Latimeria chalumnae	98.08	6.00e-67	245.00
IUUC-Loc-052020	Lepisosteus oculatus	98.72	2.00e-67	247.00
IUUC-Lma-053163	Leptosphaeria maculans	85.06	2.00e-60	224.00
IUUC-Laf-054502	Loxodonta africana	97.22	8.00e-58	215.00
IUUC-Mcc-055895	Macaca mulatta	100.00	2.00e-68	250.00
IUUC-Meu-056529	Macropus eugenii	100.00	2.00e-68	250.00
IUUC-Mor-056959	Magnaporthe oryzae	84.42	2.00e-55	207.00
IUUC-Mpo-057436	Magnaporthe poae	84.42	2.00e-55	207.00
IUUC-Mtr-058743	Medicago truncatula	84.42	2.00e-63	234.00
IUUC-Mla-058871	Melampsora laricipopulina	86.09	6.00e-61	226.00
IUUC-Mga-059211	Meleagris gallopavo	95.21	1.00e-58	218.00
IUUC-Mvi-060484	Microbotryum violaceum	82.58	6.00e-59	219.00
IUUC-Mmr-060710	Microcebus murinus	99.36	8.00e-75	271.00
IUUC-Mdo-062150	Monodelphis domestica	98.73	2.00e-67	247.00
IUUC-Mmu-064336	Mus musculus	99.36	8.00e-68	248.00
IUUC-Mac-064616	Musa acuminata	83.87	9.00e-62	228.00
IUUC-Mpu-066613	Mustela putorius furo	100.00	2.00e-68	250.00
IUUC-Mlu-067676	Myotis lucifugus	100.00	2.00e-68	250.00
IUUC-Nfi-068350	Neosartorya fischeri	86.84	6.00e-61	226.00
IUUC-Ncr-068635	Neurospora crassa	86.18	2.00e-55	207.00
IUUC-Nle-069607	Nomascus leucogenys	96.79	1.00e-65	241.00
IUUC-Opr-070523	Ochotona princeps	98.71	2.00e-65	240.00
IUUC-Ont-071636	Oreochromis niloticus	98.72	2.00e-67	248.00
IUUC-Oan-073638	Ornithorhynchus anatinus	100.00	2.00e-68	251.00
IUUC-Ocu-074497	Oryctolagus cuniculus	100.00	2.00e-68	250.00
IUUC-Oba-075488	Oryza barthii	84.97	4.00e-56	209.00
IUUC-Obr-076443	Oryza brachyantha	84.97	4.00e-56	209.00
IUUC-Ogl-077000	Oryza glaberrima	84.97	4.00e-56	209.00
IUUC-Oin-080161	Oryza indica	84.97	4.00e-56	209.00
IUUC-Olo-080936	Oryza longistaminata	70.37	9.00e-20	87.80
IUUC-Ome-081322	Oryza meridionalis	84.97	4.00e-56	209.00
IUUC-Oru-085032	Oryza rufipogon	84.97	4.00e-56	209.00
IUUC-Osa-085398	Oryza sativa	84.97	4.00e-56	209.00
IUUC-Ola-086383	Oryzias latipes	98.08	1.00e-66	244.00
IUUC-Olu-087619	Ostreococcus lucimarinus	81.33	2.00e-46	177.00
IUUC-Oga-089160	Otolemur garnettii	94.87	7.00e-69	252.00
IUUC-Oar-090107	Ovis aries	100.00	2.00e-68	251.00
IUUC-Ptr-090693	Pan troglodytes	100.00	2.00e-68	250.00
IUUC-Pan-092065	Papio anubis	100.00	2.00e-68	250.00
IUUC-Psi-093901	Pelodiscus sinensis	99.29	1.00e-58	218.00
IUUC-Pma-094647	Petromyzon marinus	93.44	7.00e-43	165.00
IUUC-Ppa-095330	Physcomitrella patens	84.87	5.00e-62	229.00
IUUC-Pfo-097442	Poecilia formosa	98.72	2.00e-67	248.00
IUUC-Pab-098246	Pongo abelii	94.87	1.00e-65	241.00
IUUC-Pop-099335	Populus trichocarpa	84.97	9.00e-63	231.00
IUUC-Ppe-101784	Prunus persica	84.97	9.00e-63	231.00
IUUC-Pva-102665	Pteropus vampyrus	98.01	9.00e-63	231.00
IUUC-Pgr-103596	Puccinia graminis	84.77	3.00e-56	210.00
IUUC-Ptt-103852	Puccinia triticina	67.30	6.00e-47	181.00
IUUC-Pte-104221	Pyrenophora teres	85.71	1.00e-60	225.00
IUUC-Pyt-104464	Pyrenophora triticirepentis	84.42	2.00e-59	221.00
IUUC-Rno-105805	Rattus norvegicus	99.36	8.00e-68	248.00
IUUC-Sce-106232	Saccharomyces cerevisiae	82.78	7.00e-54	202.00
IUUC-Sha-106772	Sarcophilus harrisii	100.00	2.00e-68	251.00
IUUC-Sja-107885	Schizosaccharomyces japonicus	86.39	7.00e-57	212.00
IUUC-Spo-108212	Schizosaccharomyces pombe	83.67	1.00e-48	185.00
IUUC-Ssl-108492	Sclerotinia sclerotiorum	86.75	2.00e-55	207.00
IUUC-Sit-110054	Setaria italica	84.97	7.00e-62	229.00
IUUC-Sly-111074	Solanum lycopersicum	84.97	5.00e-62	229.00
IUUC-Stu-112439	Solanum tuberosum	85.62	3.00e-63	233.00
IUUC-Sbi-113920	Sorghum bicolor	85.62	2.00e-62	231.00
IUUC-Sre-114920	Sporisorium reilianum	84.67	1.00e-56	211.00
IUUC-Ssc-115514	Sus scrofa	100.00	2.00e-68	250.00
IUUC-Tgu-116890	Taeniopygia guttata	98.73	1.00e-66	244.00
IUUC-Tru-118475	Takifugu rubripes	98.72	2.00e-67	247.00
IUUC-Tsy-119447	Tarsius syrichta	99.36	6.00e-68	249.00
IUUC-Tni-119751	Tetraodon nigroviridis	97.14	5.00e-57	212.00
IUUC-Tca-121126	Theobroma cacao	84.97	9.00e-63	231.00
IUUC-Tre-122027	Trichoderma reesei	86.84	7.00e-61	225.00
IUUC-Tvi-122659	Trichoderma virens	86.84	7.00e-61	225.00
IUUC-Tae-124683	Triticum aestivum	84.97	5.00e-56	209.00
IUUC-Tme-126994	Tuber melanosporum	86.09	2.00e-54	204.00
IUUC-Tbe-127851	Tupaia belangeri	100.00	5.00e-41	158.00
IUUC-Ttr-128453	Tursiops truncatus	100.00	2.00e-68	250.00
IUUC-Uma-129571	Ustilago maydis	84.00	3.00e-56	210.00
IUUC-Vda-129762	Verticillium dahliae	86.18	1.00e-55	208.00
IUUC-Vpa-130119	Vicugna pacos	81.41	4.00e-47	179.00
IUUC-Vvi-131376	Vitis vinifera	84.97	4.00e-63	233.00
IUUC-Xtr-131977	Xenopus tropicalis	91.67	6.00e-60	222.00
IUUC-Xma-133747	Xiphophorus maculatus	98.36	1.00e-47	181.00
IUUC-Yli-134406	Yarrowia lipolytica	85.03	2.00e-47	181.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence