iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003132

Ensembl Protein ID

ERN13085

UniProt Accession

W1PZQ3; W1PZQ3_AMBTC

Genbank Protein ID

ERN13085.1

Protein Name

Protein HIRA

Genbank Nucleotide ID

KI392591

Gene Name

AMTR_s00040p00154330

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00040p00154330	ERN13085	ERN13085

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-23	79.8	123	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt++v +l++ +d  +l+s+s D+t+++W+++ g ++
   Q: 123  GHTADVVDLNWsPDdLILASCSLDNTVHIWNMSNGICT 160
           8***********886779*************9998886 PP

Organism

Amborella trichopoda

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MITEKPGWIR HGGLQIFSID IQPGGLRFAT AGGDHKVRIW NMKSVGRETE YDQTNQTLLA 60
TLRDHFGSVN CVRWAKHGRY VASGSDDQVI LVHERKPGSG TTEFGSGEPP DVENWKVVMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTACAG AGAAACCAGG GTGGATTAGG CATGGGGGAT TGCAAATATT CTCCATAGAT 60
ATTCAGCCTG GTGGCCTTCG CTTTGCTACA GCAGGGGGAG ACCATAAGGT AGGTTTTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

atr:18441323

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	65.31	0.00e+00	1338.00
IUUC-Aml-001723	Ailuropoda melanoleuca	41.49	2.00e-79	289.00
IUUC-Apl-003197	Anas platyrhynchos	40.76	9.00e-79	287.00
IUUC-Aca-004733	Anolis carolinensis	36.36	5.00e-84	304.00
IUUC-Aly-005446	Arabidopsis lyrata	65.05	0.00e+00	1222.00
IUUC-Ath-007627	Arabidopsis thaliana	63.38	0.00e+00	1224.00
IUUC-Ago-007766	Ashbya gossypii	31.38	7.00e-58	217.00
IUUC-Acl-008104	Aspergillus clavatus	31.19	8.00e-70	257.00
IUUC-Afl-008591	Aspergillus flavus	33.95	2.00e-67	250.00
IUUC-Afu-008781	Aspergillus fumigatus	32.28	2.00e-62	233.00
IUUC-Ani-009272	Aspergillus nidulans	28.43	5.00e-54	205.00
IUUC-Ang-009655	Aspergillus niger	31.16	1.00e-66	247.00
IUUC-Aor-010119	Aspergillus oryzae	33.95	2.00e-67	250.00
IUUC-Ate-010530	Aspergillus terreus	27.57	9.00e-53	201.00
IUUC-Bgr-012237	Blumeria graminis	33.08	3.00e-63	236.00
IUUC-Bta-013320	Bos taurus	41.49	2.00e-79	289.00
IUUC-Bci-013795	Botrytis cinerea	25.89	2.00e-84	306.00
IUUC-Bdi-014075	Brachypodium distachyon	67.78	0.00e+00	1373.00
IUUC-Bol-016440	Brassica oleracea	65.09	0.00e+00	1231.00
IUUC-Bra-016651	Brassica rapa	65.30	0.00e+00	1203.00
IUUC-Cel-018692	Caenorhabditis elegans	27.78	2.00e-41	163.00
IUUC-Cja-018987	Callithrix jacchus	40.63	6.00e-71	261.00
IUUC-Cfa-020132	Canis familiaris	41.49	2.00e-79	289.00
IUUC-Cpo-021484	Cavia porcellus	41.67	4.00e-83	301.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	37.72	3.00e-76	279.00
IUUC-Csa-023081	Chlorocebus sabaeus	36.99	3.00e-83	302.00
IUUC-Cin-025182	Ciona intestinalis	34.97	4.00e-81	295.00
IUUC-Csv-026154	Ciona savignyi	35.85	3.00e-83	302.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	26.26	4.00e-83	301.00
IUUC-Cne-026891	Cryptococcus neoformans	39.17	1.00e-76	280.00
IUUC-Cme-027349	Cyanidioschyzon merolae	28.67	3.00e-55	209.00
IUUC-Dre-027655	Danio rerio	34.09	9.00e-83	300.00
IUUC-Dno-029557	Dasypus novemcinctus	41.39	7.00e-68	251.00
IUUC-Dor-030687	Dipodomys ordii	37.29	7.00e-63	234.00
IUUC-Dse-031334	Dothistroma septosporum	26.68	6.00e-87	314.00
IUUC-Dme-031746	Drosophila melanogaster	37.41	2.00e-84	306.00
IUUC-Ete-032384	Echinops telfairi	35.84	1.00e-58	220.00
IUUC-Eca-033430	Equus caballus	41.24	4.00e-79	288.00
IUUC-Fca-036121	Felis catus	41.48	1.00e-80	293.00
IUUC-Fal-036817	Ficedula albicollis	36.54	1.00e-78	286.00
IUUC-Fox-037906	Fusarium oxysporum	34.73	2.00e-67	249.00
IUUC-Fso-038409	Fusarium solani	25.97	2.00e-84	306.00
IUUC-Gmo-039151	Gadus morhua	39.90	2.00e-80	292.00
IUUC-Ggr-040016	Gaeumannomyces graminis	33.98	2.00e-66	246.00
IUUC-Gga-040936	Gallus gallus	41.41	2.00e-82	299.00
IUUC-Gac-041405	Gasterosteus aculeatus	40.00	1.00e-79	290.00
IUUC-Gma-044252	Glycine max	70.29	0.00e+00	1416.00
IUUC-Ggo-045430	Gorilla gorilla	36.99	4.00e-83	301.00
IUUC-Hsa-046442	Homo sapiens	36.99	3.00e-83	301.00
IUUC-Hvu-047587	Hordeum vulgare	67.19	0.00e+00	1290.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	42.19	1.00e-61	228.00
IUUC-Kpa-049145	Komagataella pastoris	29.69	8.00e-54	204.00
IUUC-Lch-050474	Latimeria chalumnae	34.94	5.00e-80	291.00
IUUC-Lpe-051209	Leersia perrieri	67.11	0.00e+00	1315.00
IUUC-Loc-052119	Lepisosteus oculatus	35.33	7.00e-79	287.00
IUUC-Lma-053237	Leptosphaeria maculans	33.41	2.00e-65	243.00
IUUC-Laf-053718	Loxodonta africana	41.92	2.00e-83	303.00
IUUC-Mcc-055621	Macaca mulatta	35.11	1.00e-71	263.00
IUUC-Meu-055914	Macropus eugenii	40.48	3.00e-54	206.00
IUUC-Mor-057211	Magnaporthe oryzae	36.18	1.00e-28	120.00
IUUC-Mpo-057364	Magnaporthe poae	33.98	6.00e-67	248.00
IUUC-Mtr-057744	Medicago truncatula	69.66	0.00e+00	1388.00
IUUC-Mla-058914	Melampsora laricipopulina	29.77	2.00e-61	229.00
IUUC-Mga-060181	Meleagris gallopavo	34.89	1.00e-78	286.00
IUUC-Mvi-060432	Microbotryum violaceum	31.41	3.00e-55	209.00
IUUC-Mmr-060871	Microcebus murinus	36.65	4.00e-84	305.00
IUUC-Mdo-062301	Monodelphis domestica	36.36	5.00e-83	301.00
IUUC-Mmu-063888	Mus musculus	41.67	4.00e-83	301.00
IUUC-Mac-064768	Musa acuminata	68.74	0.00e+00	1342.00
IUUC-Mpu-066732	Mustela putorius furo	41.49	2.00e-79	289.00
IUUC-Mlu-067542	Myotis lucifugus	35.91	9.00e-80	290.00
IUUC-Nfi-068396	Neosartorya fischeri	34.08	8.00e-62	231.00
IUUC-Ncr-068842	Neurospora crassa	26.34	4.00e-88	318.00
IUUC-Nle-070156	Nomascus leucogenys	41.67	3.00e-83	302.00
IUUC-Opr-070808	Ochotona princeps	40.07	1.00e-51	197.00
IUUC-Ont-072105	Oreochromis niloticus	35.62	8.00e-81	294.00
IUUC-Ocu-074962	Oryctolagus cuniculus	41.49	2.00e-79	289.00
IUUC-Oba-075178	Oryza barthii	67.67	0.00e+00	1310.00
IUUC-Obr-076399	Oryza brachyantha	69.26	0.00e+00	1332.00
IUUC-Ogu-078797	Oryza glumaepatula	67.67	0.00e+00	1310.00
IUUC-Oin-080085	Oryza indica	66.91	0.00e+00	1235.00
IUUC-Olo-081048	Oryza longistaminata	82.87	2.00e-164	572.00
IUUC-Ome-081324	Oryza meridionalis	67.67	0.00e+00	1311.00
IUUC-Oni-082548	Oryza nivara	67.57	0.00e+00	1310.00
IUUC-Opu-084008	Oryza punctata	82.04	0.00e+00	733.00
IUUC-Oru-084339	Oryza rufipogon	67.57	0.00e+00	1310.00
IUUC-Osa-085782	Oryza sativa	67.57	0.00e+00	1310.00
IUUC-Ola-087302	Oryzias latipes	34.31	1.00e-77	284.00
IUUC-Olu-087611	Ostreococcus lucimarinus	46.56	7.00e-116	410.00
IUUC-Oga-087935	Otolemur garnettii	36.40	6.00e-80	291.00
IUUC-Oar-089229	Ovis aries	33.91	6.00e-64	238.00
IUUC-Ptr-090715	Pan troglodytes	36.99	3.00e-83	302.00
IUUC-Pan-092318	Papio anubis	36.78	1.00e-79	290.00
IUUC-Psi-094053	Pelodiscus sinensis	40.76	4.00e-78	285.00
IUUC-Pno-094985	Phaeosphaeria nodorum	32.18	4.00e-58	218.00
IUUC-Ppa-095499	Physcomitrella patens	51.07	0.00e+00	944.00
IUUC-Pfo-096857	Poecilia formosa	39.55	1.00e-77	283.00
IUUC-Pab-098047	Pongo abelii	36.99	2.00e-83	302.00
IUUC-Pop-099587	Populus trichocarpa	72.47	0.00e+00	1384.00
IUUC-Pca-100558	Procavia capensis	50.00	1.00e-48	187.00
IUUC-Ppe-101261	Prunus persica	70.08	0.00e+00	1379.00
IUUC-Pva-102683	Pteropus vampyrus	41.33	1.00e-80	293.00
IUUC-Pgr-103660	Puccinia graminis	35.73	9.00e-58	217.00
IUUC-Ptt-103900	Puccinia triticina	35.83	9.00e-58	217.00
IUUC-Pte-104209	Pyrenophora teres	33.72	2.00e-68	253.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	33.72	3.00e-67	249.00
IUUC-Rno-105566	Rattus norvegicus	41.67	4.00e-83	301.00
IUUC-Sce-106291	Saccharomyces cerevisiae	30.38	1.00e-62	233.00
IUUC-Sha-107514	Sarcophilus harrisii	33.53	8.00e-67	247.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	32.82	7.00e-68	251.00
IUUC-Spo-108162	Schizosaccharomyces pombe	33.08	2.00e-70	259.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	38.19	7.00e-29	120.00
IUUC-Smo-109186	Selaginella moellendorffii	53.10	0.00e+00	953.00
IUUC-Sit-109980	Setaria italica	68.85	0.00e+00	1357.00
IUUC-Sly-111547	Solanum lycopersicum	68.79	0.00e+00	1321.00
IUUC-Stu-112705	Solanum tuberosum	68.48	0.00e+00	1310.00
IUUC-Sar-113222	Sorex araneus	35.33	9.00e-73	267.00
IUUC-Sbi-114272	Sorghum bicolor	67.93	0.00e+00	1324.00
IUUC-Sre-115061	Sporisorium reilianum	36.66	3.00e-68	252.00
IUUC-Ssc-116364	Sus scrofa	40.98	3.00e-79	289.00
IUUC-Tgu-116645	Taeniopygia guttata	36.54	7.00e-79	287.00
IUUC-Tru-117590	Takifugu rubripes	36.20	3.00e-86	312.00
IUUC-Tsy-119212	Tarsius syrichta	42.06	3.00e-68	252.00
IUUC-Tni-119915	Tetraodon nigroviridis	35.67	1.00e-84	306.00
IUUC-Tca-121765	Theobroma cacao	70.26	0.00e+00	1387.00
IUUC-Tre-121887	Trichoderma reesei	33.41	1.00e-59	223.00
IUUC-Tvi-122262	Trichoderma virens	32.71	3.00e-58	219.00
IUUC-Tae-123009	Triticum aestivum	52.11	0.00e+00	845.00
IUUC-Tur-126483	Triticum urartu	67.54	0.00e+00	1359.00
IUUC-Tme-127202	Tuber melanosporum	29.34	1.00e-45	177.00
IUUC-Tbe-127350	Tupaia belangeri	33.51	2.00e-47	183.00
IUUC-Ttr-129077	Tursiops truncatus	45.17	5.00e-61	228.00
IUUC-Uma-129465	Ustilago maydis	31.87	2.00e-69	256.00
IUUC-Vda-129844	Verticillium dahliae	33.80	7.00e-65	241.00
IUUC-Vvi-131397	Vitis vinifera	71.62	0.00e+00	1410.00
IUUC-Xtr-132057	Xenopus tropicalis	35.40	9.00e-84	304.00
IUUC-Xma-134139	Xiphophorus maculatus	38.11	2.00e-66	246.00
IUUC-Yli-134424	Yarrowia lipolytica	34.75	9.00e-64	237.00
IUUC-Zma-135839	Zea mays	67.79	0.00e+00	1332.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence