iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111450

Ensembl Protein ID

Solyc07g049210.2.1

UniProt Accession

K4CF25; K4CF25_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g049210.2	Solyc07g049210.2.1	Solyc07g049210.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.70e-09	37.4	140	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++wfHp C+++s++e + + e++ C++C+s
   Q: 140  YC-KCEMPYNPDDLMVQCEGCKDWFHPSCMGMSIDEAK-TLEHFLCSDCSS 188
           78.7*****************************55555.5556******87 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAKTKPGKKD LDSYSIKGTN KVVRPGDCVL MRPSDSDKPP YVAKVEKLEA DHRNNVKVRV 60
RWYYRPEESI GGRRQFHGAK ELFLSDHFDV QSAHTIEGKC IVHSFKNYTK LENVAPEDYF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCATTCTTT AAGATTGAGC TTAAAGATTG AGTCTTTCTT GTGAACCAAT AGAAATTTCT 60
GGGTTTTGTT TACCATTCTT GAAGGACTGA GTTTAAAGAT TGATGGCTAA GACTAAACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

sly:101247139

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002986	Amborella trichopoda	88.43	3.00e-114	403.00
IUUC-Aca-005043	Anolis carolinensis	46.00	4.00e-11	63.20
IUUC-Aly-005717	Arabidopsis lyrata	79.33	4.00e-103	366.00
IUUC-Ath-007631	Arabidopsis thaliana	76.96	1.00e-102	364.00
IUUC-Ate-010345	Aspergillus terreus	44.74	3.00e-05	44.30
IUUC-Ame-011579	Astyanax mexicanus	44.00	1.00e-10	61.60
IUUC-Bdi-014153	Brachypodium distachyon	76.85	3.00e-98	349.00
IUUC-Bol-016238	Brassica oleracea	80.00	2.00e-107	380.00
IUUC-Bra-017570	Brassica rapa	76.79	3.00e-105	373.00
IUUC-Cja-018757	Callithrix jacchus	39.58	3.00e-08	53.50
IUUC-Cne-026894	Cryptococcus neoformans	43.10	5.00e-09	55.50
IUUC-Dre-028285	Danio rerio	46.00	3.00e-11	63.50
IUUC-Gmo-038789	Gadus morhua	42.00	4.00e-10	59.70
IUUC-Gac-041666	Gasterosteus aculeatus	40.00	1.00e-09	58.50
IUUC-Gma-043039	Glycine max	80.56	1.00e-108	384.00
IUUC-Lpe-051400	Leersia perrieri	80.09	1.00e-100	357.00
IUUC-Mtr-057710	Medicago truncatula	81.48	1.00e-102	364.00
IUUC-Mac-064749	Musa acuminata	84.26	2.00e-105	373.00
IUUC-Ont-072257	Oreochromis niloticus	42.00	4.00e-10	59.70
IUUC-Obr-076844	Oryza brachyantha	76.39	3.00e-100	356.00
IUUC-Ogl-077260	Oryza glaberrima	75.46	3.00e-99	353.00
IUUC-Ogu-078663	Oryza glumaepatula	78.24	6.00e-100	355.00
IUUC-Oin-079894	Oryza indica	77.78	8.00e-100	355.00
IUUC-Olo-080411	Oryza longistaminata	80.93	1.00e-97	348.00
IUUC-Ome-081623	Oryza meridionalis	77.78	6.00e-99	352.00
IUUC-Oni-082587	Oryza nivara	77.78	8.00e-100	355.00
IUUC-Opu-083591	Oryza punctata	79.63	2.00e-105	373.00
IUUC-Oru-084597	Oryza rufipogon	77.31	5.00e-99	352.00
IUUC-Osa-086057	Oryza sativa	77.78	8.00e-100	355.00
IUUC-Ola-087236	Oryzias latipes	44.00	8.00e-11	62.40
IUUC-Oga-088662	Otolemur garnettii	34.72	1.00e-10	61.20
IUUC-Ppa-095645	Physcomitrella patens	72.15	2.00e-86	310.00
IUUC-Pfo-096227	Poecilia formosa	44.00	9.00e-11	62.00
IUUC-Pop-099322	Populus trichocarpa	77.78	2.00e-104	370.00
IUUC-Ppe-101758	Prunus persica	88.89	9.00e-116	407.00
IUUC-Rno-105402	Rattus norvegicus	44.00	3.00e-10	60.10
IUUC-Smo-109649	Selaginella moellendorffii	70.45	2.00e-91	327.00
IUUC-Sit-110411	Setaria italica	78.70	2.00e-104	370.00
IUUC-Stu-112123	Solanum tuberosum	96.21	4.00e-123	432.00
IUUC-Sbi-114186	Sorghum bicolor	76.85	6.00e-102	362.00
IUUC-Tru-118118	Takifugu rubripes	44.00	8.00e-11	62.40
IUUC-Tni-120632	Tetraodon nigroviridis	44.00	9.00e-11	62.40
IUUC-Tca-121518	Theobroma cacao	90.28	8.00e-118	414.00
IUUC-Tbe-128138	Tupaia belangeri	50.00	3.00e-05	43.90
IUUC-Vvi-131614	Vitis vinifera	90.28	3.00e-116	409.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence