iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105229

Ensembl Protein ID

ENSRNOP00000003470.3

UniProt Accession

Q5XIE4; Q5XIE4_RAT

Genbank Protein ID

AAH83739.1; EDL88591.1

Protein Name

Ring finger and CHY zinc finger domain containing 1; Ring finger and CHY zinc finger domain containing 1, isoform CRA_b; Ring finger and CHY zinc finger domain-containing 1

Genbank Nucleotide ID

AC136013; CH474060

Gene Name

Rchy1; rCG_60425

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000002546.4	ENSRNOT00000003470.4	ENSRNOP00000003470.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-07	30.9	145	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCled+ +     +vlpCgH+ h++C + +       +   rCPlC
   Q: 145  CPICLEDIHTSrvvAHVLPCGHLLHRTCYEEM------LKEGYRCPLC 186
           ********553334668***********8888......9********* PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAATAQEDGV RSPAPGPRGC EHYDRACLLK APCCDKLYTC RLCHDTHEDH QLDRFKVKEV 60
QCINCEKLQH AQQTCEDCST LFGEYYCSIC HLFDKDKKQY HCESCGICRI GPKEDFFHCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGCTCCTC ACAGGCGCTG GCGGCCCAGG GCGGCCTACA GCAGCGCCCG CCCGGCGTCG 60
CAGTGGTCCC CTTCGCCCCG CAATCTGGGC TGGCAGCAAT GGGGGGGGGG AAGAAGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0005102--F:receptor binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0031398--P:positive regulation of protein ubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

rno:289508

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000576	Aegilops tauschii	45.27	1.00e-54	208.00
IUUC-Aml-002312	Ailuropoda melanoleuca	90.42	1.00e-141	495.00
IUUC-Atr-003010	Amborella trichopoda	44.94	1.00e-58	220.00
IUUC-Apl-003676	Anas platyrhynchos	84.93	2.00e-66	244.00
IUUC-Aly-005993	Arabidopsis lyrata	49.79	4.00e-65	241.00
IUUC-Ath-007665	Arabidopsis thaliana	47.72	5.00e-58	217.00
IUUC-Ago-007995	Ashbya gossypii	44.87	5.00e-53	201.00
IUUC-Acl-008144	Aspergillus clavatus	44.07	5.00e-56	212.00
IUUC-Afl-008618	Aspergillus flavus	44.07	6.00e-56	212.00
IUUC-Afu-008863	Aspergillus fumigatus	44.49	2.00e-57	217.00
IUUC-Ani-009131	Aspergillus nidulans	43.22	1.00e-48	187.00
IUUC-Ang-009555	Aspergillus niger	43.64	1.00e-56	214.00
IUUC-Aor-010177	Aspergillus oryzae	42.92	6.00e-51	193.00
IUUC-Ate-010343	Aspergillus terreus	41.10	6.00e-49	189.00
IUUC-Bgr-012193	Blumeria graminis	44.73	1.00e-55	211.00
IUUC-Bta-013191	Bos taurus	85.82	9.00e-131	459.00
IUUC-Bci-013852	Botrytis cinerea	45.34	2.00e-56	214.00
IUUC-Bdi-014453	Brachypodium distachyon	45.31	6.00e-59	220.00
IUUC-Bol-015118	Brassica oleracea	47.30	5.00e-63	234.00
IUUC-Bra-017289	Brassica rapa	46.15	7.00e-63	233.00
IUUC-Cja-019581	Callithrix jacchus	89.66	6.00e-141	493.00
IUUC-Cfa-021051	Canis familiaris	90.65	2.00e-132	464.00
IUUC-Cpo-022137	Cavia porcellus	92.81	6.00e-84	302.00
IUUC-Cre-022565	Chlamydomonas reinhardtii	42.63	3.00e-55	207.00
IUUC-Csa-024259	Chlorocebus sabaeus	90.04	1.00e-141	495.00
IUUC-Cho-024855	Choloepus hoffmanni	83.91	1.00e-125	441.00
IUUC-Cin-025667	Ciona intestinalis	51.68	2.00e-69	255.00
IUUC-Csv-025807	Ciona savignyi	51.93	1.00e-68	252.00
IUUC-Cgl-026589	Colletotrichum gloeosporioides	43.20	1.00e-54	207.00
IUUC-Cme-027329	Cyanidioschyzon merolae	43.51	7.00e-55	209.00
IUUC-Dre-028584	Danio rerio	71.61	3.00e-104	370.00
IUUC-Dor-030930	Dipodomys ordii	79.00	1.00e-98	352.00
IUUC-Dse-031251	Dothistroma septosporum	37.14	2.00e-51	197.00
IUUC-Dme-031649	Drosophila melanogaster	48.15	7.00e-60	224.00
IUUC-Ete-032847	Echinops telfairi	64.41	3.00e-97	347.00
IUUC-Eca-033470	Equus caballus	92.64	1.00e-127	448.00
IUUC-Eeu-034769	Erinaceus europaeus	69.74	4.00e-56	211.00
IUUC-Fca-035728	Felis catus	89.27	8.00e-139	485.00
IUUC-Fal-036768	Ficedula albicollis	79.15	4.00e-104	370.00
IUUC-Fox-037872	Fusarium oxysporum	44.68	2.00e-35	143.00
IUUC-Fso-038415	Fusarium solani	42.13	1.00e-57	217.00
IUUC-Gmo-038620	Gadus morhua	66.54	6.00e-98	350.00
IUUC-Ggr-040055	Gaeumannomyces graminis	42.37	2.00e-53	204.00
IUUC-Gga-040156	Gallus gallus	81.39	3.00e-112	397.00
IUUC-Gac-041535	Gasterosteus aculeatus	70.17	2.00e-94	338.00
IUUC-Gma-043631	Glycine max	46.12	4.00e-62	231.00
IUUC-Ggo-044951	Gorilla gorilla	90.04	9.00e-142	495.00
IUUC-Hsa-045737	Homo sapiens	90.04	1.00e-141	495.00
IUUC-Hvu-047256	Hordeum vulgare	44.05	2.00e-58	218.00
IUUC-Itr-048684	Ictidomys tridecemlineatus	92.34	7.00e-145	505.00
IUUC-Kpa-049272	Komagataella pastoris	41.84	6.00e-52	198.00
IUUC-Lch-050661	Latimeria chalumnae	69.40	1.00e-97	348.00
IUUC-Lpe-051107	Leersia perrieri	45.53	8.00e-59	220.00
IUUC-Loc-051936	Lepisosteus oculatus	66.54	6.00e-104	370.00
IUUC-Lma-053154	Leptosphaeria maculans	42.70	9.00e-21	94.40
IUUC-Laf-054226	Loxodonta africana	90.04	5.00e-137	479.00
IUUC-Mcc-055281	Macaca mulatta	90.04	1.00e-141	495.00
IUUC-Meu-056901	Macropus eugenii	79.22	3.00e-99	353.00
IUUC-Mor-057100	Magnaporthe oryzae	43.40	2.00e-56	214.00
IUUC-Mpo-057579	Magnaporthe poae	42.98	1.00e-54	208.00
IUUC-Mtr-058223	Medicago truncatula	45.34	3.00e-61	228.00
IUUC-Mla-059118	Melampsora laricipopulina	39.34	1.00e-03	40.00
IUUC-Mga-059512	Meleagris gallopavo	86.44	1.00e-58	218.00
IUUC-Mmr-060992	Microcebus murinus	89.19	2.00e-133	468.00
IUUC-Mdo-062157	Monodelphis domestica	83.83	3.00e-111	394.00
IUUC-Mmu-063959	Mus musculus	94.64	3.00e-140	490.00
IUUC-Mac-065603	Musa acuminata	44.27	8.00e-60	223.00
IUUC-Mpu-065859	Mustela putorius furo	85.12	2.00e-56	209.00
IUUC-Mlu-067798	Myotis lucifugus	81.68	5.00e-124	436.00
IUUC-Nfi-068506	Neosartorya fischeri	44.07	2.00e-56	214.00
IUUC-Ncr-068859	Neurospora crassa	43.22	8.00e-55	208.00
IUUC-Nle-069585	Nomascus leucogenys	90.04	1.00e-141	495.00
IUUC-Opr-070267	Ochotona princeps	89.27	7.00e-138	482.00
IUUC-Ont-071374	Oreochromis niloticus	68.70	2.00e-97	348.00
IUUC-Oan-073381	Ornithorhynchus anatinus	81.90	3.00e-112	397.00
IUUC-Ocu-074867	Oryctolagus cuniculus	91.57	2.00e-143	501.00
IUUC-Oba-075296	Oryza barthii	45.53	1.00e-58	219.00
IUUC-Obr-076751	Oryza brachyantha	46.00	2.00e-58	218.00
IUUC-Ogl-077845	Oryza glaberrima	45.53	1.00e-58	219.00
IUUC-Ogu-078233	Oryza glumaepatula	44.26	1.00e-54	207.00
IUUC-Oin-079830	Oryza indica	44.53	7.00e-58	216.00
IUUC-Olo-080782	Oryza longistaminata	44.67	7.00e-57	214.00
IUUC-Ome-081602	Oryza meridionalis	45.53	8.00e-59	220.00
IUUC-Oni-082797	Oryza nivara	45.53	1.00e-58	219.00
IUUC-Opu-083572	Oryza punctata	45.53	2.00e-58	218.00
IUUC-Oru-085188	Oryza rufipogon	46.84	9.00e-59	221.00
IUUC-Osa-085573	Oryza sativa	45.53	1.00e-58	219.00
IUUC-Ola-087568	Oryzias latipes	67.07	2.00e-93	335.00
IUUC-Olu-087838	Ostreococcus lucimarinus	41.42	9.00e-51	194.00
IUUC-Oga-089082	Otolemur garnettii	87.36	5.00e-134	469.00
IUUC-Oar-089298	Ovis aries	84.29	1.00e-129	455.00
IUUC-Ptr-091569	Pan troglodytes	90.04	2.00e-141	494.00
IUUC-Pan-092256	Papio anubis	87.74	4.00e-137	480.00
IUUC-Psi-093159	Pelodiscus sinensis	80.95	1.00e-102	365.00
IUUC-Pma-094483	Petromyzon marinus	58.33	4.00e-77	280.00
IUUC-Pno-094998	Phaeosphaeria nodorum	41.25	2.00e-52	200.00
IUUC-Ppa-095813	Physcomitrella patens	45.28	3.00e-61	228.00
IUUC-Pfo-096583	Poecilia formosa	69.07	2.00e-100	358.00
IUUC-Pab-098741	Pongo abelii	90.04	1.00e-141	495.00
IUUC-Pop-099476	Populus trichocarpa	44.72	6.00e-63	233.00
IUUC-Pca-100669	Procavia capensis	85.93	3.00e-66	244.00
IUUC-Ppe-101325	Prunus persica	46.06	8.00e-60	223.00
IUUC-Pva-102213	Pteropus vampyrus	88.12	4.00e-137	480.00
IUUC-Pte-104080	Pyrenophora teres	40.25	1.00e-50	195.00
IUUC-Pyt-104774	Pyrenophora triticirepentis	40.25	4.00e-51	196.00
IUUC-Sha-106745	Sarcophilus harrisii	83.12	2.00e-107	381.00
IUUC-Sja-107843	Schizosaccharomyces japonicus	43.70	6.00e-54	204.00
IUUC-Spo-108194	Schizosaccharomyces pombe	44.02	3.00e-52	199.00
IUUC-Ssl-108426	Sclerotinia sclerotiorum	37.07	2.00e-41	164.00
IUUC-Smo-108873	Selaginella moellendorffii	47.35	1.00e-59	223.00
IUUC-Sit-110031	Setaria italica	44.98	2.00e-59	223.00
IUUC-Sly-110906	Solanum lycopersicum	46.12	2.00e-61	228.00
IUUC-Stu-112734	Solanum tuberosum	45.56	5.00e-61	228.00
IUUC-Sar-113709	Sorex araneus	86.21	6.00e-134	469.00
IUUC-Sbi-114253	Sorghum bicolor	47.98	1.00e-62	233.00
IUUC-Ssc-116428	Sus scrofa	82.76	4.00e-112	397.00
IUUC-Tgu-116992	Taeniopygia guttata	79.01	8.00e-108	382.00
IUUC-Tru-118486	Takifugu rubripes	68.58	2.00e-83	301.00
IUUC-Tsy-118833	Tarsius syrichta	77.49	3.00e-101	360.00
IUUC-Tni-120395	Tetraodon nigroviridis	69.92	7.00e-91	326.00
IUUC-Tca-121639	Theobroma cacao	43.01	2.00e-62	232.00
IUUC-Tre-121938	Trichoderma reesei	44.13	2.00e-59	223.00
IUUC-Tvi-122465	Trichoderma virens	43.93	6.00e-60	225.00
IUUC-Tae-122877	Triticum aestivum	46.84	1.00e-57	216.00
IUUC-Tur-126465	Triticum urartu	43.85	3.00e-56	211.00
IUUC-Tme-127113	Tuber melanosporum	44.92	1.00e-58	220.00
IUUC-Tbe-127598	Tupaia belangeri	73.16	3.00e-88	317.00
IUUC-Ttr-128736	Tursiops truncatus	82.96	6.00e-63	233.00
IUUC-Vda-129684	Verticillium dahliae	44.49	2.00e-52	200.00
IUUC-Vpa-130311	Vicugna pacos	88.74	3.00e-122	430.00
IUUC-Vvi-131084	Vitis vinifera	44.94	2.00e-54	205.00
IUUC-Xtr-132909	Xenopus tropicalis	75.32	1.00e-105	375.00
IUUC-Xma-133441	Xiphophorus maculatus	69.49	6.00e-101	360.00
IUUC-Yli-134456	Yarrowia lipolytica	45.57	1.00e-57	218.00
IUUC-Zma-134792	Zea mays	46.46	1.00e-60	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence