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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018275
UUCD1 version UUC-CaE-00454
Ensembl Protein ID F53H4.1
UniProt Accession Q93781; Q93781_CAEEL
Genbank Protein ID CAB03135.2
Protein Name CSB (Cockayne Syndrome B) homolog
Genbank Nucleotide ID BX284606
Gene Name csb-1; CELE_F53H4.1; F53H4.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00000803 F53H4.1 F53H4.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
UBD/Alpha-Helix/CUE 35.85 4.00e-104 377.00 IUUC-Hsa-046895
UBD/Alpha-Helix/UBA 35.85 4.00e-104 377.00 IUUC-Hsa-046895
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MSTKPEPENP DSGTPKTLSV DDDDIVVIED QNTPKYREAA LRRSNSSSSD FDEKWEPELD 60
EEDFCENDAD VLAEPISSKS RKKSRRSDSS EFVPSEESDD DEEYEVLEKS RKKGRKSGSS 120
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Protein Fasta Sequence


>IUUC-Cel-018275|UBD,CUE;UBD,UBA|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCAACTA AACCGGAACC AGAAAATCCC GATTCTGGTA CACCAAAAAC TCTCTCAGTT 60
GACGATGATG ATATAGTTGT TATTGAAGAT CAGAATACTC CGAAGTATAG AGAGGCAGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018275|UBD,CUE;UBD,UBA|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
Pfam

PF00271--Helicase_C
PF00176--SNF2_N
SMART

SM00487--DEXDc
SM00490--HELICc
Gene Ontology

GO:0005524--F:ATP binding
GO:0009650--P:UV protection
KEGG cel:CELE_F53H4.1
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000518 Aegilops tauschii 34.51 3.00e-96 345.00
IUUC-Aml-002021 Ailuropoda melanoleuca 37.82 3.00e-108 385.00
IUUC-Atr-002868 Amborella trichopoda 33.96 2.00e-92 333.00
IUUC-Apl-003989 Anas platyrhynchos 35.96 3.00e-106 379.00
IUUC-Aca-004609 Anolis carolinensis 37.59 2.00e-111 396.00
IUUC-Aly-005912 Arabidopsis lyrata 34.23 3.00e-92 332.00
IUUC-Ath-006812 Arabidopsis thaliana 34.03 3.00e-90 325.00
IUUC-Ago-007719 Ashbya gossypii 34.49 2.00e-94 338.00
IUUC-Acl-008050 Aspergillus clavatus 32.65 5.00e-90 325.00
IUUC-Afl-008677 Aspergillus flavus 34.15 1.00e-85 310.00
IUUC-Afu-008975 Aspergillus fumigatus 33.76 5.00e-89 321.00
IUUC-Ani-009464 Aspergillus nidulans 32.98 1.00e-88 320.00
IUUC-Ang-009516 Aspergillus niger 33.57 1.00e-80 293.00
IUUC-Aor-010057 Aspergillus oryzae 34.01 5.00e-86 311.00
IUUC-Ate-010307 Aspergillus terreus 34.77 3.00e-84 305.00
IUUC-Ame-011055 Astyanax mexicanus 36.35 9.00e-111 394.00
IUUC-Bgr-012211 Blumeria graminis 31.68 1.00e-80 293.00
IUUC-Bta-012761 Bos taurus 37.50 5.00e-92 332.00
IUUC-Bci-013603 Botrytis cinerea 33.46 4.00e-87 315.00
IUUC-Bdi-014031 Brachypodium distachyon 35.20 2.00e-96 346.00
IUUC-Bol-015096 Brassica oleracea 34.93 2.00e-92 332.00
IUUC-Bra-017583 Brassica rapa 34.40 2.00e-90 325.00
IUUC-Cja-019733 Callithrix jacchus 37.22 9.00e-105 374.00
IUUC-Cfa-020631 Canis familiaris 38.00 7.00e-106 377.00
IUUC-Cpo-022218 Cavia porcellus 37.78 5.00e-107 382.00
IUUC-Cre-022710 Chlamydomonas reinhardtii 30.80 2.00e-77 283.00
IUUC-Csa-023723 Chlorocebus sabaeus 37.22 2.00e-105 376.00
IUUC-Cho-024312 Choloepus hoffmanni 37.34 2.00e-42 167.00
IUUC-Cin-025376 Ciona intestinalis 37.09 3.00e-102 365.00
IUUC-Cgl-026654 Colletotrichum gloeosporioides 34.23 9.00e-88 317.00
IUUC-Cme-027109 Cyanidioschyzon merolae 36.01 3.00e-87 315.00
IUUC-Dre-028672 Danio rerio 37.85 3.00e-109 389.00
IUUC-Dno-028893 Dasypus novemcinctus 36.56 3.00e-107 382.00
IUUC-Dor-031114 Dipodomys ordii 29.89 1.00e-65 244.00
IUUC-Dse-031225 Dothistroma septosporum 34.19 1.00e-91 330.00
IUUC-Eca-034071 Equus caballus 36.19 3.00e-105 375.00
IUUC-Eeu-034781 Erinaceus europaeus 35.78 1.00e-106 380.00
IUUC-Fca-036561 Felis catus 38.25 2.00e-104 373.00
IUUC-Fal-037343 Ficedula albicollis 35.66 3.00e-106 379.00
IUUC-Fox-037667 Fusarium oxysporum 33.91 6.00e-78 285.00
IUUC-Fso-038331 Fusarium solani 33.77 2.00e-79 290.00
IUUC-Gmo-039132 Gadus morhua 37.59 3.00e-106 379.00
IUUC-Gga-040376 Gallus gallus 36.16 2.00e-108 386.00
IUUC-Gac-042326 Gasterosteus aculeatus 37.78 2.00e-105 376.00
IUUC-Gma-043401 Glycine max 33.86 3.00e-98 352.00
IUUC-Ggo-044844 Gorilla gorilla 37.22 2.00e-105 376.00
IUUC-Hsa-046895 Homo sapiens 37.22 3.00e-105 375.00
IUUC-Itr-048071 Ictidomys tridecemlineatus 36.25 3.00e-105 375.00
IUUC-Kpa-049261 Komagataella pastoris 35.57 9.00e-98 350.00
IUUC-Lch-049934 Latimeria chalumnae 38.38 4.00e-109 388.00
IUUC-Lpe-051249 Leersia perrieri 32.14 4.00e-80 291.00
IUUC-Loc-052591 Lepisosteus oculatus 37.96 8.00e-108 384.00
IUUC-Lma-053210 Leptosphaeria maculans 34.17 7.00e-88 317.00
IUUC-Laf-054403 Loxodonta africana 37.85 2.00e-105 376.00
IUUC-Mcc-054876 Macaca mulatta 37.22 2.00e-105 376.00
IUUC-Mor-057145 Magnaporthe oryzae 31.48 1.00e-82 300.00
IUUC-Mpo-057493 Magnaporthe poae 32.51 2.00e-84 306.00
IUUC-Mtr-057734 Medicago truncatula 34.37 1.00e-94 340.00
IUUC-Mga-059402 Meleagris gallopavo 36.64 4.00e-108 385.00
IUUC-Mmr-061791 Microcebus murinus 35.82 2.00e-105 376.00
IUUC-Mdo-062148 Monodelphis domestica 37.41 2.00e-106 379.00
IUUC-Mmu-063238 Mus musculus 38.08 6.00e-106 378.00
IUUC-Mac-064440 Musa acuminata 32.95 3.00e-91 328.00
IUUC-Mpu-066112 Mustela putorius furo 34.93 4.00e-106 378.00
IUUC-Mlu-067057 Myotis lucifugus 38.22 6.00e-108 384.00
IUUC-Nfi-068617 Neosartorya fischeri 34.33 6.00e-89 321.00
IUUC-Ncr-068920 Neurospora crassa 34.48 4.00e-86 311.00
IUUC-Nle-069992 Nomascus leucogenys 37.22 2.00e-105 376.00
IUUC-Opr-070929 Ochotona princeps 36.08 2.00e-103 369.00
IUUC-Ont-071740 Oreochromis niloticus 37.41 9.00e-109 387.00
IUUC-Oan-073380 Ornithorhynchus anatinus 34.68 4.00e-71 261.00
IUUC-Ocu-074143 Oryctolagus cuniculus 37.52 1.00e-102 367.00
IUUC-Oba-075626 Oryza barthii 34.26 7.00e-91 327.00
IUUC-Obr-076240 Oryza brachyantha 34.94 2.00e-95 342.00
IUUC-Ogl-077187 Oryza glaberrima 38.59 1.00e-75 276.00
IUUC-Ogu-078629 Oryza glumaepatula 38.26 2.00e-61 229.00
IUUC-Oin-079268 Oryza indica 33.33 2.00e-91 330.00
IUUC-Olo-080567 Oryza longistaminata 33.75 1.00e-77 283.00
IUUC-Oni-082122 Oryza nivara 38.59 1.00e-75 277.00
IUUC-Opu-083477 Oryza punctata 34.66 5.00e-95 341.00
IUUC-Oru-084783 Oryza rufipogon 38.59 1.00e-75 277.00
IUUC-Osa-086206 Oryza sativa 33.33 2.00e-91 328.00
IUUC-Oga-088414 Otolemur garnettii 34.98 7.00e-101 361.00
IUUC-Oar-089697 Ovis aries 37.59 2.00e-106 379.00
IUUC-Ptr-090856 Pan troglodytes 37.59 2.00e-105 376.00
IUUC-Pan-092521 Papio anubis 37.22 2.00e-105 376.00
IUUC-Psi-093037 Pelodiscus sinensis 37.52 4.00e-107 382.00
IUUC-Pma-094456 Petromyzon marinus 36.14 1.00e-93 337.00
IUUC-Pno-094861 Phaeosphaeria nodorum 34.44 6.00e-86 311.00
IUUC-Ppa-095711 Physcomitrella patens 34.63 7.00e-94 337.00
IUUC-Pfo-096223 Poecilia formosa 38.33 6.00e-111 394.00
IUUC-Pab-098595 Pongo abelii 37.04 2.00e-104 372.00
IUUC-Pop-099531 Populus trichocarpa 36.03 3.00e-98 352.00
IUUC-Ppe-101528 Prunus persica 33.45 2.00e-96 346.00
IUUC-Pte-104217 Pyrenophora teres 34.27 5.00e-89 321.00
IUUC-Pyt-104797 Pyrenophora triticirepentis 34.15 3.00e-89 322.00
IUUC-Rno-105742 Rattus norvegicus 38.52 4.00e-106 378.00
IUUC-Sce-106234 Saccharomyces cerevisiae 34.36 7.00e-95 340.00
IUUC-Sha-106622 Sarcophilus harrisii 33.22 5.00e-95 341.00
IUUC-Sja-107874 Schizosaccharomyces japonicus 34.89 1.00e-89 323.00
IUUC-Spo-108021 Schizosaccharomyces pombe 34.62 1.00e-90 326.00
IUUC-Ssl-108500 Sclerotinia sclerotiorum 34.31 2.00e-89 322.00
IUUC-Smo-109132 Selaginella moellendorffii 33.90 1.00e-91 330.00
IUUC-Sit-110066 Setaria italica 34.89 9.00e-97 347.00
IUUC-Sly-111833 Solanum lycopersicum 34.44 1.00e-93 336.00
IUUC-Stu-112189 Solanum tuberosum 34.63 1.00e-92 333.00
IUUC-Sar-113511 Sorex araneus 37.11 2.00e-93 336.00
IUUC-Sbi-114606 Sorghum bicolor 34.14 3.00e-97 348.00
IUUC-Ssc-116374 Sus scrofa 36.33 8.00e-107 381.00
IUUC-Tgu-117153 Taeniopygia guttata 37.29 1.00e-104 373.00
IUUC-Tru-118178 Takifugu rubripes 37.94 9.00e-108 384.00
IUUC-Tsy-119524 Tarsius syrichta 38.30 6.00e-103 368.00
IUUC-Tni-120546 Tetraodon nigroviridis 37.75 3.00e-109 389.00
IUUC-Tca-121065 Theobroma cacao 34.20 1.00e-92 333.00
IUUC-Tre-121868 Trichoderma reesei 34.49 2.00e-81 296.00
IUUC-Tvi-122455 Trichoderma virens 31.61 4.00e-79 288.00
IUUC-Tae-123249 Triticum aestivum 34.14 2.00e-95 343.00
IUUC-Tur-126107 Triticum urartu 34.33 4.00e-96 345.00
IUUC-Ttr-128768 Tursiops truncatus 35.35 2.00e-100 359.00
IUUC-Vda-129884 Verticillium dahliae 35.09 1.00e-89 323.00
IUUC-Vpa-130521 Vicugna pacos 38.18 9.00e-53 201.00
IUUC-Vvi-130838 Vitis vinifera 32.57 2.00e-90 326.00
IUUC-Xtr-132056 Xenopus tropicalis 34.62 2.00e-89 323.00
IUUC-Xma-133113 Xiphophorus maculatus 38.33 4.00e-111 395.00
IUUC-Yli-134344 Yarrowia lipolytica 34.86 2.00e-96 346.00
IUUC-Zma-134837 Zea mays 33.88 2.00e-94 339.00
Created Date 25-Jun-2017

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