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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007456
UUCD1 version UUC-ArT-01405
Ensembl Protein ID AT4G34210.1
UniProt Accession O49484; A0MFB7; ASK11_ARATH
Genbank Protein ID CAA17551.1; CAB80138.1; AEE86340.1; ABE66110.1; ABK28664.1
Protein Name SKP1-like protein 11
Genbank Nucleotide ID AL021961; AL161585; CP002687; DQ446893; DQ653243
Gene Name ASK11; At4g34210; F10M10.2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G34210 AT4G34210.1 AT4G34210.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexPINAHINTMentha
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/SCF/SKP1 1.30e-31 109.4 103 150
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
    ksLLdltc+tVadmikgktpeeiR tFnienDftpeEe++vR+EnqWA
   Q: 103 KSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWA 150
    89*********************************************9 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity). Plays a role during early flowers reproductive development.
Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity). Plays a role during early flowers reproductive development.
Protein Sequence
(Fasta)
MSSKMIVLMS SDGQSFEVEE AVAIQSQTIA HMVEDDCVAD GIPLANVESK ILVKVIEYCK 60
KHHVDEANPI SEEDLNNWDE KFMDLEQSTI FELILAANYL NIKSLLDLTC QTVADMIKGK 120
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Protein Fasta Sequence



>IUUC-Ath-007456|E3,SKP1|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCTTCGA AGATGATCGT GTTGATGAGC TCCGATGGTC AGTCGTTTGA GGTGGAAGAA 60
GCGGTAGCAA TCCAATCGCA GACCATAGCG CATATGGTTG AAGACGATTG CGTTGCTGAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007456|E3,SKP1|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0005634--C:nucleus
GO:0016567--P:protein ubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG ath:AT4G34210
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005922 Arabidopsis lyrata 84.87 4.00e-70 255.00
IUUC-Acl-008178 Aspergillus clavatus 50.00 6.00e-40 155.00
IUUC-Afl-008452 Aspergillus flavus 50.00 3.00e-41 160.00
IUUC-Afu-008785 Aspergillus fumigatus 50.97 9.00e-40 155.00
IUUC-Ani-009312 Aspergillus nidulans 50.00 3.00e-40 156.00
IUUC-Aor-010012 Aspergillus oryzae 50.00 3.00e-41 160.00
IUUC-Ate-010375 Aspergillus terreus 49.69 2.00e-40 157.00
IUUC-Cel-018653 Caenorhabditis elegans 51.53 8.00e-38 149.00
IUUC-Dse-031209 Dothistroma septosporum 47.50 1.00e-36 145.00
IUUC-Kpa-049138 Komagataella pastoris 40.11 8.00e-32 129.00
IUUC-Mvi-060342 Microbotryum violaceum 51.25 1.00e-40 158.00
IUUC-Nfi-068309 Neosartorya fischeri 50.97 9.00e-40 155.00
IUUC-Oan-073000 Ornithorhynchus anatinus 80.00 2.00e-22 95.90
IUUC-Ptt-103874 Puccinia triticina 51.94 2.00e-33 135.00
IUUC-Sce-106387 Saccharomyces cerevisiae 51.72 1.00e-31 128.00
IUUC-Sja-107902 Schizosaccharomyces japonicus 49.03 6.00e-38 149.00
IUUC-Spo-108033 Schizosaccharomyces pombe 50.32 4.00e-39 152.00
IUUC-Sre-115178 Sporisorium reilianum 51.61 4.00e-41 159.00
IUUC-Tre-122004 Trichoderma reesei 44.59 2.00e-27 114.00
IUUC-Tvi-122449 Trichoderma virens 46.62 5.00e-28 116.00
IUUC-Tme-127078 Tuber melanosporum 51.30 7.00e-38 148.00
IUUC-Uma-129517 Ustilago maydis 50.32 2.00e-39 153.00
Created Date 25-Jun-2017

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