iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052091

Ensembl Protein ID

ENSLOCP00000000018.1

UniProt Accession

W5LV61; W5LV61_LEPOC

Protein Name

Uncharacterized protein

Gene Name

DDB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000000012.1	ENSLOCT00000000018.1	ENSLOCP00000000018.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DDB1	37.33	1.00e-162	570.00	IUUC-Cel-018239
E3 adaptor/Cullin RING/DCX/DDB1	55.11	0.00e+00	957.00	IUUC-Dme-031940
E3 adaptor/Cullin RING/DCX/DDB1	82.27	0.00e+00	1480.00	IUUC-Hsa-046709

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MSYNYVVTAQ KPTAVNACIT GHFTSADDLN LLIAKNTRLE IYVVTAEGLR PVKEVGMYGK 60
IAVMELFRPK GESKDLLFIL TAKYNACILE YKQNGDSIDI ITRAHGNGGL RAGAVCNLCV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTACA ACTACGTGGT GACGGCTCAG AAACCCACTG CAGTTAATGC CTGCATTACC 60
GGTAATTGTC TATATTTCTG CTTTCGAAGT GTCCGGTTGT GGCCTCGGTG CTACCGTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	46.29	0.00e+00	769.00
IUUC-Aml-002096	Ailuropoda melanoleuca	82.38	0.00e+00	1521.00
IUUC-Atr-002742	Amborella trichopoda	47.79	0.00e+00	799.00
IUUC-Apl-003624	Anas platyrhynchos	82.49	0.00e+00	1523.00
IUUC-Aca-005085	Anolis carolinensis	82.70	0.00e+00	1523.00
IUUC-Aly-005857	Arabidopsis lyrata	47.84	0.00e+00	803.00
IUUC-Ath-006658	Arabidopsis thaliana	47.95	0.00e+00	805.00
IUUC-Acl-008149	Aspergillus clavatus	27.90	9.00e-78	285.00
IUUC-Afl-008549	Aspergillus flavus	28.20	2.00e-83	304.00
IUUC-Afu-009076	Aspergillus fumigatus	27.60	2.00e-85	310.00
IUUC-Ani-009302	Aspergillus nidulans	26.49	2.00e-42	167.00
IUUC-Ang-009636	Aspergillus niger	27.68	9.00e-72	265.00
IUUC-Aor-010073	Aspergillus oryzae	28.20	2.00e-83	304.00
IUUC-Ate-010422	Aspergillus terreus	26.96	2.00e-74	274.00
IUUC-Ame-011643	Astyanax mexicanus	81.10	0.00e+00	1453.00
IUUC-Bgr-012164	Blumeria graminis	26.23	2.00e-70	260.00
IUUC-Bta-012494	Bos taurus	82.27	0.00e+00	1519.00
IUUC-Bci-013957	Botrytis cinerea	26.98	3.00e-62	234.00
IUUC-Bdi-014186	Brachypodium distachyon	47.90	0.00e+00	798.00
IUUC-Bol-015922	Brassica oleracea	48.38	0.00e+00	814.00
IUUC-Bra-017300	Brassica rapa	48.38	0.00e+00	807.00
IUUC-Cel-018239	Caenorhabditis elegans	37.35	5.00e-174	605.00
IUUC-Cja-019165	Callithrix jacchus	82.27	0.00e+00	1520.00
IUUC-Cfa-020406	Canis familiaris	82.38	0.00e+00	1521.00
IUUC-Cpo-022154	Cavia porcellus	82.49	0.00e+00	1523.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	38.88	7.00e-152	531.00
IUUC-Csa-024061	Chlorocebus sabaeus	82.27	0.00e+00	1520.00
IUUC-Cho-024554	Choloepus hoffmanni	83.47	0.00e+00	805.00
IUUC-Cin-025466	Ciona intestinalis	57.68	0.00e+00	1065.00
IUUC-Csv-026370	Ciona savignyi	56.66	0.00e+00	1022.00
IUUC-Cgl-026595	Colletotrichum gloeosporioides	28.46	1.00e-84	308.00
IUUC-Cme-027342	Cyanidioschyzon merolae	27.15	1.00e-84	308.00
IUUC-Dre-027448	Danio rerio	95.60	0.00e+00	988.00
IUUC-Dno-029794	Dasypus novemcinctus	82.08	0.00e+00	1415.00
IUUC-Dor-030789	Dipodomys ordii	65.02	0.00e+00	721.00
IUUC-Dse-031491	Dothistroma septosporum	28.73	9.00e-51	195.00
IUUC-Dme-031940	Drosophila melanogaster	56.31	0.00e+00	972.00
IUUC-Ete-032913	Echinops telfairi	72.08	0.00e+00	729.00
IUUC-Eca-033777	Equus caballus	81.73	0.00e+00	1503.00
IUUC-Eeu-034900	Erinaceus europaeus	75.93	0.00e+00	861.00
IUUC-Fca-035869	Felis catus	82.38	0.00e+00	1521.00
IUUC-Fal-036777	Ficedula albicollis	82.59	0.00e+00	1532.00
IUUC-Fox-037954	Fusarium oxysporum	25.09	7.00e-44	172.00
IUUC-Fso-038292	Fusarium solani	25.05	3.00e-46	181.00
IUUC-Gmo-038815	Gadus morhua	76.33	0.00e+00	848.00
IUUC-Ggr-039907	Gaeumannomyces graminis	26.27	2.00e-69	258.00
IUUC-Gga-040995	Gallus gallus	82.49	0.00e+00	1523.00
IUUC-Gac-042390	Gasterosteus aculeatus	86.07	0.00e+00	1457.00
IUUC-Gma-042743	Glycine max	47.52	0.00e+00	776.00
IUUC-Ggo-044891	Gorilla gorilla	82.16	0.00e+00	1519.00
IUUC-Hsa-046709	Homo sapiens	82.27	0.00e+00	1520.00
IUUC-Hvu-047504	Hordeum vulgare	47.15	0.00e+00	778.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	82.27	0.00e+00	1520.00
IUUC-Lch-050565	Latimeria chalumnae	82.59	0.00e+00	1511.00
IUUC-Lpe-051260	Leersia perrieri	48.28	0.00e+00	802.00
IUUC-Lma-053246	Leptosphaeria maculans	25.73	2.00e-82	300.00
IUUC-Laf-053502	Loxodonta africana	82.16	0.00e+00	1518.00
IUUC-Mcc-054802	Macaca mulatta	82.21	0.00e+00	1503.00
IUUC-Meu-056808	Macropus eugenii	77.43	0.00e+00	838.00
IUUC-Mor-057253	Magnaporthe oryzae	25.00	1.00e-27	119.00
IUUC-Mpo-057562	Magnaporthe poae	26.27	3.00e-68	253.00
IUUC-Mtr-057743	Medicago truncatula	46.88	0.00e+00	785.00
IUUC-Mla-059154	Melampsora laricipopulina	25.65	4.00e-58	220.00
IUUC-Mga-059824	Meleagris gallopavo	82.49	0.00e+00	1526.00
IUUC-Mvi-060279	Microbotryum violaceum	27.80	5.00e-86	313.00
IUUC-Mmr-061215	Microcebus murinus	82.05	0.00e+00	1508.00
IUUC-Mdo-062028	Monodelphis domestica	82.03	0.00e+00	1528.00
IUUC-Mmu-064327	Mus musculus	82.49	0.00e+00	1524.00
IUUC-Mac-065445	Musa acuminata	48.39	0.00e+00	784.00
IUUC-Mpu-065814	Mustela putorius furo	78.59	0.00e+00	1427.00
IUUC-Mlu-067136	Myotis lucifugus	82.59	0.00e+00	1525.00
IUUC-Nfi-068355	Neosartorya fischeri	27.71	3.00e-79	290.00
IUUC-Ncr-068620	Neurospora crassa	26.20	1.00e-62	235.00
IUUC-Nle-069566	Nomascus leucogenys	82.21	0.00e+00	1493.00
IUUC-Opr-070915	Ochotona princeps	73.41	0.00e+00	1320.00
IUUC-Ont-071753	Oreochromis niloticus	87.78	0.00e+00	1585.00
IUUC-Oan-073187	Ornithorhynchus anatinus	82.81	0.00e+00	1529.00
IUUC-Ocu-074619	Oryctolagus cuniculus	82.27	0.00e+00	1518.00
IUUC-Oba-075091	Oryza barthii	45.92	0.00e+00	696.00
IUUC-Obr-076425	Oryza brachyantha	48.29	0.00e+00	791.00
IUUC-Ogu-078794	Oryza glumaepatula	48.17	0.00e+00	798.00
IUUC-Oin-079725	Oryza indica	47.74	0.00e+00	782.00
IUUC-Olo-080842	Oryza longistaminata	46.93	0.00e+00	780.00
IUUC-Ome-081818	Oryza meridionalis	48.28	0.00e+00	802.00
IUUC-Oni-082879	Oryza nivara	47.31	0.00e+00	775.00
IUUC-Opu-083361	Oryza punctata	47.41	0.00e+00	789.00
IUUC-Oru-084781	Oryza rufipogon	48.17	0.00e+00	800.00
IUUC-Osa-086293	Oryza sativa	48.17	0.00e+00	800.00
IUUC-Ola-086881	Oryzias latipes	87.58	0.00e+00	1579.00
IUUC-Olu-087674	Ostreococcus lucimarinus	42.80	0.00e+00	669.00
IUUC-Oga-089056	Otolemur garnettii	82.49	0.00e+00	1521.00
IUUC-Oar-089457	Ovis aries	82.49	0.00e+00	1491.00
IUUC-Ptr-091179	Pan troglodytes	82.27	0.00e+00	1521.00
IUUC-Pan-092019	Papio anubis	81.98	0.00e+00	1514.00
IUUC-Psi-093407	Pelodiscus sinensis	82.42	0.00e+00	1521.00
IUUC-Pma-094272	Petromyzon marinus	79.39	0.00e+00	1325.00
IUUC-Pno-094864	Phaeosphaeria nodorum	26.49	7.00e-81	295.00
IUUC-Ppa-095885	Physcomitrella patens	48.14	0.00e+00	805.00
IUUC-Pfo-096083	Poecilia formosa	87.24	0.00e+00	1573.00
IUUC-Pab-098652	Pongo abelii	78.45	0.00e+00	1433.00
IUUC-Pop-099593	Populus trichocarpa	47.95	0.00e+00	758.00
IUUC-Pca-100189	Procavia capensis	78.16	0.00e+00	1030.00
IUUC-Ppe-101987	Prunus persica	48.06	0.00e+00	763.00
IUUC-Pva-102605	Pteropus vampyrus	82.27	0.00e+00	1520.00
IUUC-Pgr-103659	Puccinia graminis	24.85	5.00e-59	223.00
IUUC-Ptt-103884	Puccinia triticina	23.20	4.00e-46	180.00
IUUC-Pte-104233	Pyrenophora teres	26.85	2.00e-43	171.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	26.45	1.00e-79	291.00
IUUC-Rno-106004	Rattus norvegicus	82.38	0.00e+00	1521.00
IUUC-Sha-106726	Sarcophilus harrisii	81.15	0.00e+00	1466.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	24.49	6.00e-54	206.00
IUUC-Spo-108029	Schizosaccharomyces pombe	26.21	1.00e-71	265.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	27.09	2.00e-57	217.00
IUUC-Smo-108808	Selaginella moellendorffii	48.44	0.00e+00	838.00
IUUC-Sit-109735	Setaria italica	48.45	0.00e+00	789.00
IUUC-Sly-111520	Solanum lycopersicum	47.15	0.00e+00	777.00
IUUC-Sar-113606	Sorex araneus	85.45	3.00e-102	366.00
IUUC-Sbi-114539	Sorghum bicolor	47.19	0.00e+00	776.00
IUUC-Sre-114936	Sporisorium reilianum	24.32	3.00e-31	131.00
IUUC-Ssc-116038	Sus scrofa	82.27	0.00e+00	1518.00
IUUC-Tgu-117512	Taeniopygia guttata	81.73	0.00e+00	1504.00
IUUC-Tru-117593	Takifugu rubripes	87.04	0.00e+00	1570.00
IUUC-Tsy-119513	Tarsius syrichta	75.36	0.00e+00	922.00
IUUC-Tni-120551	Tetraodon nigroviridis	81.77	0.00e+00	1452.00
IUUC-Tca-121505	Theobroma cacao	48.28	0.00e+00	775.00
IUUC-Tre-122136	Trichoderma reesei	25.56	3.00e-75	277.00
IUUC-Tvi-122512	Trichoderma virens	25.57	2.00e-75	278.00
IUUC-Tae-122891	Triticum aestivum	47.15	0.00e+00	779.00
IUUC-Tur-126451	Triticum urartu	47.04	0.00e+00	775.00
IUUC-Tme-127057	Tuber melanosporum	28.28	1.00e-73	271.00
IUUC-Ttr-128891	Tursiops truncatus	76.33	0.00e+00	1183.00
IUUC-Uma-129583	Ustilago maydis	24.02	2.00e-37	151.00
IUUC-Vda-129870	Verticillium dahliae	25.27	3.00e-42	167.00
IUUC-Vpa-130117	Vicugna pacos	74.66	0.00e+00	1041.00
IUUC-Vvi-131033	Vitis vinifera	47.20	0.00e+00	778.00
IUUC-Xtr-131987	Xenopus tropicalis	81.16	0.00e+00	1476.00
IUUC-Xma-134117	Xiphophorus maculatus	87.24	0.00e+00	1573.00
IUUC-Zma-134758	Zea mays	47.96	0.00e+00	793.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence