iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__1069__AT2G30910.1	fgenesh2_kg.4__1069__AT2G30910.1	fgenesh2_kg.4__1069__AT2G30910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-16	60.5	144	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtl.lvsGsdDgtikvWD 29
           H++svt++a+ ++++ l++ s Dg+++v++
   Q: 144  HESSVTSVAWhPNNIlLATTSTDGKCRVFS 173
           9**********77663699*********97 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAVVDVHRFA ESITCHAWSP DHSMVALCPN NTQVHIYKSS SQDQWERLHV LQKHDQIVSG 60
IDWSSKSNKI VSVSHDRNSY VWSLDGGEWV PTLVILRLNR AALCVQWSPK ENKFAVGSGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATCTCTCTC TTTCACTTCA CGTCGTCGAG CTCCGGATCT CATCGGCGTT TCATCATTCT 60
CCGTCGATCT ATTCACCGTA CGACTCCGTT ATTAGGAATC TGTAGATGTC AATTTGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

aly:ARALYDRAFT_482009

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	72.54	4.00e-124	437.00
IUUC-Aml-001709	Ailuropoda melanoleuca	41.02	5.00e-79	287.00
IUUC-Aca-004736	Anolis carolinensis	41.71	1.00e-79	289.00
IUUC-Ath-006683	Arabidopsis thaliana	96.83	0.00e+00	734.00
IUUC-Acl-008334	Aspergillus clavatus	37.57	3.00e-64	238.00
IUUC-Afl-008485	Aspergillus flavus	37.60	4.00e-60	225.00
IUUC-Ani-009417	Aspergillus nidulans	38.98	2.00e-63	235.00
IUUC-Ang-009543	Aspergillus niger	38.27	8.00e-64	236.00
IUUC-Aor-010234	Aspergillus oryzae	37.30	3.00e-63	234.00
IUUC-Bgr-012192	Blumeria graminis	34.93	4.00e-57	214.00
IUUC-Bta-012530	Bos taurus	41.71	3.00e-76	278.00
IUUC-Bci-013616	Botrytis cinerea	37.33	1.00e-59	222.00
IUUC-Bol-016274	Brassica oleracea	92.65	0.00e+00	706.00
IUUC-Bra-016790	Brassica rapa	93.44	0.00e+00	708.00
IUUC-Cel-018122	Caenorhabditis elegans	39.78	5.00e-66	244.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	41.88	1.00e-40	158.00
IUUC-Csa-023277	Chlorocebus sabaeus	40.75	1.00e-76	279.00
IUUC-Cin-025186	Ciona intestinalis	35.99	2.00e-62	232.00
IUUC-Csv-026275	Ciona savignyi	36.53	1.00e-63	236.00
IUUC-Dre-028141	Danio rerio	40.38	5.00e-81	293.00
IUUC-Dme-031907	Drosophila melanogaster	38.36	7.00e-66	243.00
IUUC-Ete-032299	Echinops telfairi	42.20	2.00e-81	295.00
IUUC-Eeu-035041	Erinaceus europaeus	30.58	9.00e-17	80.50
IUUC-Fox-037842	Fusarium oxysporum	37.00	8.00e-63	233.00
IUUC-Fso-038276	Fusarium solani	37.50	3.00e-62	231.00
IUUC-Ggr-039762	Gaeumannomyces graminis	38.30	1.00e-60	226.00
IUUC-Gma-042803	Glycine max	76.92	5.00e-166	576.00
IUUC-Hvu-047456	Hordeum vulgare	63.89	9.00e-63	231.00
IUUC-Lch-049679	Latimeria chalumnae	42.01	1.00e-79	289.00
IUUC-Lma-053109	Leptosphaeria maculans	37.99	4.00e-62	231.00
IUUC-Laf-054271	Loxodonta africana	41.71	2.00e-76	278.00
IUUC-Mga-059279	Meleagris gallopavo	42.16	2.00e-81	295.00
IUUC-Mvi-060302	Microbotryum violaceum	36.79	5.00e-68	250.00
IUUC-Mmr-060765	Microcebus murinus	42.12	2.00e-75	275.00
IUUC-Mdo-062326	Monodelphis domestica	41.64	1.00e-77	282.00
IUUC-Mlu-067571	Myotis lucifugus	41.24	1.00e-79	289.00
IUUC-Nfi-068383	Neosartorya fischeri	37.57	1.00e-64	239.00
IUUC-Nle-069900	Nomascus leucogenys	41.38	7.00e-77	280.00
IUUC-Opr-070386	Ochotona princeps	37.43	1.00e-61	229.00
IUUC-Ocu-074187	Oryctolagus cuniculus	40.38	2.00e-80	292.00
IUUC-Oba-075379	Oryza barthii	71.66	5.00e-158	550.00
IUUC-Oni-083043	Oryza nivara	71.66	5.00e-158	550.00
IUUC-Oru-084839	Oryza rufipogon	71.66	5.00e-158	550.00
IUUC-Ola-087274	Oryzias latipes	41.18	2.00e-74	271.00
IUUC-Pma-094124	Petromyzon marinus	41.32	7.00e-82	296.00
IUUC-Pno-095031	Phaeosphaeria nodorum	37.08	2.00e-61	228.00
IUUC-Ppa-095858	Physcomitrella patens	58.93	1.00e-132	466.00
IUUC-Pfo-097107	Poecilia formosa	41.47	3.00e-75	275.00
IUUC-Ppe-101681	Prunus persica	76.47	6.00e-171	592.00
IUUC-Pte-104384	Pyrenophora teres	37.74	4.00e-59	221.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	37.74	4.00e-59	221.00
IUUC-Sce-106411	Saccharomyces cerevisiae	34.64	3.00e-54	204.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	35.79	3.00e-61	228.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	37.33	9.00e-60	223.00
IUUC-Sit-110150	Setaria italica	70.89	3.00e-160	556.00
IUUC-Sly-111048	Solanum lycopersicum	74.13	2.00e-166	577.00
IUUC-Tsy-119515	Tarsius syrichta	55.17	2.00e-42	165.00
IUUC-Tni-119844	Tetraodon nigroviridis	41.05	2.00e-74	271.00
IUUC-Tvi-122523	Trichoderma virens	38.24	2.00e-62	232.00
IUUC-Tur-126640	Triticum urartu	67.58	2.00e-142	497.00
IUUC-Tme-127018	Tuber melanosporum	37.54	2.00e-52	198.00
IUUC-Vvi-131647	Vitis vinifera	78.88	3.00e-172	597.00
IUUC-Xtr-131893	Xenopus tropicalis	40.97	4.00e-77	280.00
IUUC-Xma-133435	Xiphophorus maculatus	41.47	3.00e-75	275.00
IUUC-Yli-134471	Yarrowia lipolytica	37.97	8.00e-61	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence