iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095738

Ensembl Protein ID

PP1S17_54V6.2

UniProt Accession

A9RMD0; A9RMD0_PHYPA

Genbank Protein ID

EDQ79842.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544906

Gene Name

PHYPADRAFT_203877

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S17_54V6	PP1S17_54V6.2	PP1S17_54V6.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-19	70.0	56	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H+  v+++++ +  + +v++s+D + +vW+l
   Q: 56   HEQLVSGIDWaPKsNKIVTCSHDRNSYVWSL 86
           9999*******6669**************97 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAAVGVQHLA QCITCHAWNS DMSMVALCPN NNEVHIYKAS MDSNSVWERV YVLEKHEQLV 60
SGIDWAPKSN KIVTCSHDRN SYVWSLEGDQ WQATLVILRL NRAATSVEWS PQENKFVVGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGTCCCAA GCTCTGAGGT GGGGCATTCC TGATTAGCAG GGACATCGAT TATGGTTGGT 60
TGGATCCGCC TTTTAACCAT TTCTTTCACC GACATTGCAT CGTTGCCTGT GCGCAGGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

ppp:PHYPADRAFT_203877

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006683	Arabidopsis thaliana	59.95	7.00e-133	466.00
IUUC-Acl-008334	Aspergillus clavatus	40.99	9.00e-72	263.00
IUUC-Ame-011512	Astyanax mexicanus	42.44	5.00e-84	303.00
IUUC-Bol-016274	Brassica oleracea	58.85	1.00e-134	472.00
IUUC-Bra-016790	Brassica rapa	58.49	5.00e-132	463.00
IUUC-Cho-024449	Choloepus hoffmanni	31.48	4.00e-14	71.60
IUUC-Dre-028141	Danio rerio	43.92	1.00e-85	308.00
IUUC-Eeu-035041	Erinaceus europaeus	32.67	1.00e-18	86.70
IUUC-Gga-040898	Gallus gallus	42.71	6.00e-86	310.00
IUUC-Gma-043868	Glycine max	59.79	4.00e-135	473.00
IUUC-Ggo-045355	Gorilla gorilla	31.23	3.00e-48	185.00
IUUC-Lch-049679	Latimeria chalumnae	41.64	4.00e-82	297.00
IUUC-Lpe-050869	Leersia perrieri	57.03	1.00e-128	452.00
IUUC-Mga-059279	Meleagris gallopavo	42.97	2.00e-86	311.00
IUUC-Nfi-068383	Neosartorya fischeri	40.85	2.00e-71	261.00
IUUC-Oan-072692	Ornithorhynchus anatinus	43.35	1.00e-86	312.00
IUUC-Oba-075379	Oryza barthii	57.03	2.00e-127	447.00
IUUC-Obr-076404	Oryza brachyantha	57.85	2.00e-131	461.00
IUUC-Ogu-078759	Oryza glumaepatula	57.03	3.00e-127	447.00
IUUC-Oin-079118	Oryza indica	56.81	4.00e-129	453.00
IUUC-Olo-081055	Oryza longistaminata	56.63	4.00e-111	393.00
IUUC-Ome-081281	Oryza meridionalis	57.03	2.00e-127	447.00
IUUC-Oni-083043	Oryza nivara	57.03	2.00e-127	447.00
IUUC-Opu-083392	Oryza punctata	48.28	2.00e-101	361.00
IUUC-Oru-084839	Oryza rufipogon	57.03	2.00e-127	447.00
IUUC-Osa-085377	Oryza sativa	57.07	2.00e-129	454.00
IUUC-Pno-095031	Phaeosphaeria nodorum	39.53	4.00e-68	251.00
IUUC-Ppe-101681	Prunus persica	58.81	4.00e-133	466.00
IUUC-Pgr-103309	Puccinia graminis	40.24	9.00e-75	273.00
IUUC-Sit-110150	Setaria italica	57.29	3.00e-130	457.00
IUUC-Sly-111048	Solanum lycopersicum	59.64	3.00e-135	473.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence