iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107783

Ensembl Protein ID

EEB08890

UniProt Accession

B6K5T6; B6K5T6_SCHJY

Genbank Protein ID

EEB08890.1

Protein Name

WD repeat protein Crb3

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_04062

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_04062	EEB08890	EEB08890

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-16	56.5	174	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.......sdtllvsGsdDgtikvWDlrtgvll 36
           gHt ++t+l         s  ++ + s+D+t+k+WD+++g ll
   Q: 174  GHTRDITGLYCgkgpavaS--RVFTTSRDNTVKIWDMSSGLLL 214
           8********6688865433..7899************999765 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MIEAILSGYE ATQEEQSNVC AHNLHNGSLL STFRQSSPYP NATCISRSYL LSAQKNKPQL 60
NIHAFGKENL DQRIILPETV ECLKCSPCGS WLVAGTKSGQ LYLWSMLSGA LLHFFRAHYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATGTGGAA GAGAAGAAAC ATTGTTTGAG TAAAAGTTCT GTCGCCAATA CTGAAGTAGG 60
AGTAATATGT ATTATTACTT GCTGTTTTAT TACTCGACCA CGTCCTTGCC TTCCCTTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032153--C:cell division site
GO:0000775--C:chromosome, centromeric region
GO:0005829--C:cytosol
GO:0044732--C:mitotic spindle pole body
GO:0005720--C:nuclear heterochromatin
GO:0097344--C:Rix1 complex
GO:0030702--P:chromatin silencing at centromere

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001040	Aegilops tauschii	27.63	4.00e-22	97.10
IUUC-Aml-001819	Ailuropoda melanoleuca	33.33	5.00e-28	116.00
IUUC-Atr-002808	Amborella trichopoda	27.83	5.00e-19	86.70
IUUC-Apl-004023	Anas platyrhynchos	30.39	7.00e-13	65.90
IUUC-Aly-006061	Arabidopsis lyrata	26.98	6.00e-28	116.00
IUUC-Ath-007111	Arabidopsis thaliana	26.43	9.00e-26	109.00
IUUC-Acl-008357	Aspergillus clavatus	29.25	1.00e-33	135.00
IUUC-Afl-008564	Aspergillus flavus	30.33	3.00e-34	137.00
IUUC-Afu-009113	Aspergillus fumigatus	28.39	1.00e-32	132.00
IUUC-Ani-009132	Aspergillus nidulans	28.40	3.00e-35	140.00
IUUC-Ang-009586	Aspergillus niger	29.34	2.00e-33	134.00
IUUC-Aor-009882	Aspergillus oryzae	30.03	1.00e-33	135.00
IUUC-Ate-010249	Aspergillus terreus	28.53	1.00e-31	129.00
IUUC-Ame-010912	Astyanax mexicanus	31.94	3.00e-37	147.00
IUUC-Bgr-012242	Blumeria graminis	24.47	1.00e-25	108.00
IUUC-Bta-013402	Bos taurus	34.29	8.00e-31	125.00
IUUC-Bci-013791	Botrytis cinerea	25.30	1.00e-26	112.00
IUUC-Bdi-015054	Brachypodium distachyon	27.73	2.00e-29	121.00
IUUC-Bol-016342	Brassica oleracea	27.93	8.00e-27	112.00
IUUC-Bra-016967	Brassica rapa	28.28	1.00e-26	111.00
IUUC-Cja-019758	Callithrix jacchus	34.18	2.00e-30	124.00
IUUC-Cfa-020495	Canis familiaris	35.56	1.00e-28	118.00
IUUC-Cpo-021438	Cavia porcellus	33.22	3.00e-34	137.00
IUUC-Csa-023416	Chlorocebus sabaeus	34.18	2.00e-31	127.00
IUUC-Csv-025918	Ciona savignyi	30.09	3.00e-31	127.00
IUUC-Cgl-026618	Colletotrichum gloeosporioides	26.13	2.00e-22	98.20
IUUC-Cne-026843	Cryptococcus neoformans	33.66	5.00e-29	120.00
IUUC-Cme-027256	Cyanidioschyzon merolae	25.55	5.00e-13	67.00
IUUC-Dre-027560	Danio rerio	29.52	4.00e-35	140.00
IUUC-Dno-029315	Dasypus novemcinctus	35.44	8.00e-37	145.00
IUUC-Dor-030935	Dipodomys ordii	34.29	5.00e-37	146.00
IUUC-Dse-031492	Dothistroma septosporum	26.21	5.00e-27	113.00
IUUC-Dme-032059	Drosophila melanogaster	28.31	2.00e-33	134.00
IUUC-Fca-036068	Felis catus	32.44	3.00e-28	117.00
IUUC-Fal-037467	Ficedula albicollis	35.66	3.00e-31	127.00
IUUC-Fox-037903	Fusarium oxysporum	26.13	2.00e-25	108.00
IUUC-Gmo-039323	Gadus morhua	29.34	6.00e-25	106.00
IUUC-Ggr-040050	Gaeumannomyces graminis	25.24	8.00e-15	72.80
IUUC-Gga-040563	Gallus gallus	32.85	1.00e-26	111.00
IUUC-Gac-042641	Gasterosteus aculeatus	28.60	2.00e-32	130.00
IUUC-Gma-043856	Glycine max	28.92	1.00e-30	125.00
IUUC-Ggo-045137	Gorilla gorilla	33.86	5.00e-28	116.00
IUUC-Hsa-046335	Homo sapiens	33.54	2.00e-27	114.00
IUUC-Hvu-047685	Hordeum vulgare	29.40	3.00e-25	107.00
IUUC-Itr-048032	Ictidomys tridecemlineatus	33.97	2.00e-36	144.00
IUUC-Kpa-049129	Komagataella pastoris	29.07	2.00e-39	154.00
IUUC-Lch-049532	Latimeria chalumnae	33.53	1.00e-40	158.00
IUUC-Lpe-051321	Leersia perrieri	28.29	2.00e-22	98.20
IUUC-Loc-052471	Lepisosteus oculatus	29.72	4.00e-29	120.00
IUUC-Lma-053091	Leptosphaeria maculans	26.21	2.00e-31	128.00
IUUC-Laf-054331	Loxodonta africana	32.38	7.00e-29	119.00
IUUC-Mcc-055803	Macaca mulatta	34.18	2.00e-31	127.00
IUUC-Meu-056090	Macropus eugenii	32.95	2.00e-37	147.00
IUUC-Mor-057160	Magnaporthe oryzae	25.75	3.00e-26	110.00
IUUC-Mtr-058800	Medicago truncatula	26.94	3.00e-35	140.00
IUUC-Mla-058943	Melampsora laricipopulina	34.39	2.00e-25	108.00
IUUC-Mga-059282	Meleagris gallopavo	34.47	3.00e-29	120.00
IUUC-Mvi-060315	Microbotryum violaceum	32.38	3.00e-27	114.00
IUUC-Mmr-061127	Microcebus murinus	33.02	4.00e-32	130.00
IUUC-Mdo-062350	Monodelphis domestica	33.82	1.00e-37	148.00
IUUC-Mmu-063706	Mus musculus	33.02	1.00e-34	138.00
IUUC-Mac-065554	Musa acuminata	27.36	7.00e-22	96.30
IUUC-Mpu-066711	Mustela putorius furo	33.65	5.00e-35	139.00
IUUC-Mlu-068121	Myotis lucifugus	34.81	3.00e-30	124.00
IUUC-Nfi-068454	Neosartorya fischeri	28.39	1.00e-32	132.00
IUUC-Ncr-068914	Neurospora crassa	26.98	2.00e-27	114.00
IUUC-Nle-069518	Nomascus leucogenys	34.83	8.00e-29	119.00
IUUC-Ont-071435	Oreochromis niloticus	33.15	2.00e-36	144.00
IUUC-Oba-075873	Oryza barthii	26.81	9.00e-33	132.00
IUUC-Obr-076097	Oryza brachyantha	30.59	3.00e-28	117.00
IUUC-Ogl-077840	Oryza glaberrima	26.74	1.00e-32	132.00
IUUC-Ogu-077988	Oryza glumaepatula	26.81	9.00e-33	132.00
IUUC-Oin-079237	Oryza indica	28.05	1.00e-23	101.00
IUUC-Olo-080415	Oryza longistaminata	26.71	2.00e-24	105.00
IUUC-Ome-081952	Oryza meridionalis	27.04	2.00e-32	130.00
IUUC-Oni-082300	Oryza nivara	26.81	9.00e-33	132.00
IUUC-Opu-083436	Oryza punctata	29.13	1.00e-22	99.00
IUUC-Oru-085164	Oryza rufipogon	27.15	2.00e-32	131.00
IUUC-Osa-086129	Oryza sativa	27.27	4.00e-33	133.00
IUUC-Ola-086571	Oryzias latipes	32.27	3.00e-36	144.00
IUUC-Oga-088561	Otolemur garnettii	33.65	3.00e-33	134.00
IUUC-Oar-090131	Ovis aries	32.32	1.00e-26	112.00
IUUC-Ptr-091301	Pan troglodytes	26.97	6.00e-15	72.80
IUUC-Pan-092810	Papio anubis	34.18	2.00e-31	127.00
IUUC-Psi-093091	Pelodiscus sinensis	31.76	4.00e-26	109.00
IUUC-Pno-095047	Phaeosphaeria nodorum	25.24	2.00e-24	105.00
IUUC-Ppa-095317	Physcomitrella patens	31.60	1.00e-28	119.00
IUUC-Pfo-096996	Poecilia formosa	31.41	4.00e-35	140.00
IUUC-Pab-097747	Pongo abelii	33.97	4.00e-31	127.00
IUUC-Pop-099828	Populus trichocarpa	31.33	2.00e-26	111.00
IUUC-Pca-100972	Procavia capensis	34.39	4.00e-26	110.00
IUUC-Ppe-101904	Prunus persica	27.58	4.00e-31	127.00
IUUC-Pva-102700	Pteropus vampyrus	33.63	6.00e-19	86.70
IUUC-Pgr-103616	Puccinia graminis	36.36	7.00e-26	110.00
IUUC-Ptt-103954	Puccinia triticina	35.23	4.00e-23	100.00
IUUC-Pte-104120	Pyrenophora teres	26.27	2.00e-30	125.00
IUUC-Pyt-104558	Pyrenophora triticirepentis	25.71	6.00e-30	123.00
IUUC-Rno-104933	Rattus norvegicus	32.38	4.00e-34	136.00
IUUC-Sce-106403	Saccharomyces cerevisiae	25.07	1.00e-25	108.00
IUUC-Sha-107636	Sarcophilus harrisii	34.10	1.00e-38	152.00
IUUC-Spo-108192	Schizosaccharomyces pombe	52.91	1.00e-138	484.00
IUUC-Ssl-108384	Sclerotinia sclerotiorum	26.09	1.00e-28	119.00
IUUC-Smo-109066	Selaginella moellendorffii	32.14	1.00e-32	132.00
IUUC-Sit-110770	Setaria italica	30.72	5.00e-31	126.00
IUUC-Sly-111453	Solanum lycopersicum	30.50	2.00e-33	135.00
IUUC-Stu-112384	Solanum tuberosum	29.75	2.00e-33	135.00
IUUC-Sbi-113952	Sorghum bicolor	28.65	1.00e-29	121.00
IUUC-Sre-115223	Sporisorium reilianum	32.27	2.00e-27	115.00
IUUC-Ssc-115627	Sus scrofa	34.29	7.00e-31	125.00
IUUC-Tgu-117404	Taeniopygia guttata	35.29	5.00e-31	126.00
IUUC-Tru-117629	Takifugu rubripes	32.16	6.00e-36	142.00
IUUC-Tni-119839	Tetraodon nigroviridis	32.52	1.00e-31	129.00
IUUC-Tca-121766	Theobroma cacao	28.80	4.00e-31	126.00
IUUC-Tre-122047	Trichoderma reesei	24.68	6.00e-24	103.00
IUUC-Tvi-122668	Trichoderma virens	24.14	6.00e-24	103.00
IUUC-Tae-125634	Triticum aestivum	29.20	1.00e-25	108.00
IUUC-Tur-126673	Triticum urartu	27.27	7.00e-17	79.70
IUUC-Tme-127070	Tuber melanosporum	27.62	3.00e-35	140.00
IUUC-Ttr-128735	Tursiops truncatus	31.71	1.00e-26	112.00
IUUC-Uma-129521	Ustilago maydis	34.13	9.00e-28	116.00
IUUC-Vvi-130872	Vitis vinifera	29.29	7.00e-30	122.00
IUUC-Xtr-131838	Xenopus tropicalis	34.42	7.00e-32	129.00
IUUC-Xma-134106	Xiphophorus maculatus	31.52	2.00e-34	137.00
IUUC-Yli-134551	Yarrowia lipolytica	31.67	2.00e-46	177.00
IUUC-Zma-134703	Zea mays	28.08	1.00e-30	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence