iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fso-038153

Ensembl Protein ID

NechaP59656

UniProt Accession

C7ZLV3; C7ZLV3_NECH7

Genbank Protein ID

EEU35029.1

Protein Name

Coatomer subunit alpha

Genbank Nucleotide ID

GG698947

Gene Name

NECHADRAFT_59656

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NechaG59656	NechaT59656	NechaP59656

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-34	114.4	56	92
UBD/Beta-Prp	5.90e-77	258.4	9	334

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  + +l+vsG+dD +ikvW++ t ++l
   Q: 56   HDGPVRGVDFhKTqPLFVSGGDDYKIKVWSYQTRRCL 92
           99*********4459***************9999887 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           t +++++s+ + ++f+p++++++++  ++ti++wd+++g+l+ ++++h+++v+ v+f+++++++v+g++D+ ikvw+++t+ c+ tl+gh d+v+++ 
   Q: 9    TKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGVDFHKTQPLFVSGGDDYKIKVWSYQTRRCLFTLNGHLDYVRTVF 106
           67889999****************************************************************************************** PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...............................kt 168
           f+ +  +++s+s+d+tir+w++++++ +  t +gh++  +c+++hp+++l+vs+slD+ vr+Wd+                               +t
   Q: 107  FHHELPWILSASDDQTIRIWNWQNRSLIC-TMTGHNHYAMCAQFHPKEDLVVSASLDQSVRVWDIsglrkkhsaptsmsfedqmaranqnqtdmfgNT 203
           ****************************9.********************************************************999999999777 PP
   S: 169  gkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           + +++   +gh++ v++++f+++++ +vs+++d+ vklw +++++   v+t++gh +n +   f+p++++++s+++D++ir+Wdl +++ +++++++n
   Q: 204  DAVVKFVLEGHDRGVNWVAFHPTMPLIVSAGDDRLVKLWRMSETKAweVDTCRGHFQNASGCLFHPHQDLILSAGEDKTIRVWDLNKRTAVQSFKREN 301
           7777666777********************************888778************************************************** PP
   S: 265  ssvisvavlsfgdnvlvlgsedskvniwklkknep 299
           ++++ +a+ +++ n +++g  d+ v+++kl++++p
   Q: 302  DRFWVIAA-HPEINLFAAG-HDNGVMVFKLERERP 334
           ********.6666555555.478*******98775 PP

Organism

Fusarium solani

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.

Protein Sequence
(Fasta)

MQSSPGMLTK FESKSSRAKG IAFHPKRPWI LVSLHSSTIQ LWDYRMGTLI DRFEEHDGPV 60
RGVDFHKTQP LFVSGGDDYK IKVWSYQTRR CLFTLNGHLD YVRTVFFHHE LPWILSASDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGTCCT CCCCGGGAAT GTTGACCAAG GTATGAATGC GCGGCCATGA TGTGTCCCGG 60
TCCAGATTGG CTAATTGTTC TTGTTGCGCA GTTTGAGTCC AAGTCCTCTC GAGCAAAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

KEGG

nhe:NECHADRAFT_59656

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000064	Aegilops tauschii	55.34	0.00e+00	981.00
IUUC-Aml-001758	Ailuropoda melanoleuca	48.60	0.00e+00	1209.00
IUUC-Atr-002493	Amborella trichopoda	47.15	0.00e+00	1094.00
IUUC-Apl-003385	Anas platyrhynchos	43.14	0.00e+00	897.00
IUUC-Aca-005154	Anolis carolinensis	71.56	2.00e-94	336.00
IUUC-Aly-006020	Arabidopsis lyrata	45.98	0.00e+00	1090.00
IUUC-Ath-007360	Arabidopsis thaliana	46.51	0.00e+00	1097.00
IUUC-Ago-007992	Ashbya gossypii	51.18	0.00e+00	1233.00
IUUC-Acl-008027	Aspergillus clavatus	75.96	0.00e+00	1921.00
IUUC-Afl-008644	Aspergillus flavus	77.03	0.00e+00	1932.00
IUUC-Afu-008964	Aspergillus fumigatus	77.03	0.00e+00	1957.00
IUUC-Ani-009379	Aspergillus nidulans	83.57	0.00e+00	1527.00
IUUC-Ang-009756	Aspergillus niger	77.41	0.00e+00	1942.00
IUUC-Aor-010174	Aspergillus oryzae	76.95	0.00e+00	1928.00
IUUC-Ate-010302	Aspergillus terreus	77.49	0.00e+00	1984.00
IUUC-Ame-011229	Astyanax mexicanus	47.50	0.00e+00	1173.00
IUUC-Bgr-012300	Blumeria graminis	77.41	0.00e+00	1947.00
IUUC-Bta-012524	Bos taurus	48.95	0.00e+00	1203.00
IUUC-Bci-013781	Botrytis cinerea	83.26	0.00e+00	2103.00
IUUC-Bdi-014549	Brachypodium distachyon	45.80	0.00e+00	1111.00
IUUC-Bol-015925	Brassica oleracea	55.34	0.00e+00	964.00
IUUC-Bra-016978	Brassica rapa	54.74	0.00e+00	957.00
IUUC-Cel-018115	Caenorhabditis elegans	51.91	0.00e+00	894.00
IUUC-Cja-019107	Callithrix jacchus	47.76	0.00e+00	1194.00
IUUC-Cfa-020675	Canis familiaris	48.29	0.00e+00	1181.00
IUUC-Cpo-021813	Cavia porcellus	49.03	0.00e+00	1217.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	56.62	0.00e+00	1002.00
IUUC-Csa-023523	Chlorocebus sabaeus	48.95	0.00e+00	1223.00
IUUC-Cho-024704	Choloepus hoffmanni	63.58	1.00e-122	432.00
IUUC-Cin-025572	Ciona intestinalis	48.31	0.00e+00	1162.00
IUUC-Csv-025864	Ciona savignyi	55.25	0.00e+00	953.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	88.04	0.00e+00	2187.00
IUUC-Cne-027053	Cryptococcus neoformans	54.33	0.00e+00	1316.00
IUUC-Cme-027222	Cyanidioschyzon merolae	39.34	2.00e-137	482.00
IUUC-Dre-027421	Danio rerio	49.72	0.00e+00	1206.00
IUUC-Dno-029303	Dasypus novemcinctus	49.07	0.00e+00	1220.00
IUUC-Dor-030290	Dipodomys ordii	46.06	2.00e-146	511.00
IUUC-Dse-031543	Dothistroma septosporum	74.55	0.00e+00	1824.00
IUUC-Dme-031945	Drosophila melanogaster	47.27	0.00e+00	1141.00
IUUC-Ete-032873	Echinops telfairi	46.43	0.00e+00	1058.00
IUUC-Eca-033773	Equus caballus	47.92	0.00e+00	1172.00
IUUC-Eeu-034874	Erinaceus europaeus	36.05	3.00e-161	561.00
IUUC-Fca-035739	Felis catus	48.51	0.00e+00	1191.00
IUUC-Fal-037263	Ficedula albicollis	45.62	0.00e+00	1070.00
IUUC-Fox-037738	Fusarium oxysporum	94.18	0.00e+00	2388.00
IUUC-Gmo-039602	Gadus morhua	46.81	0.00e+00	1108.00
IUUC-Ggr-039931	Gaeumannomyces graminis	85.64	0.00e+00	2120.00
IUUC-Gga-040590	Gallus gallus	48.22	0.00e+00	1213.00
IUUC-Gac-041318	Gasterosteus aculeatus	48.23	0.00e+00	1185.00
IUUC-Gma-043894	Glycine max	46.23	0.00e+00	1120.00
IUUC-Ggo-045029	Gorilla gorilla	48.60	0.00e+00	1215.00
IUUC-Hsa-046078	Homo sapiens	48.60	0.00e+00	1216.00
IUUC-Hvu-047556	Hordeum vulgare	46.08	0.00e+00	1115.00
IUUC-Itr-048881	Ictidomys tridecemlineatus	39.98	0.00e+00	645.00
IUUC-Kpa-049256	Komagataella pastoris	53.09	0.00e+00	1340.00
IUUC-Lch-049706	Latimeria chalumnae	48.06	0.00e+00	1183.00
IUUC-Lpe-051316	Leersia perrieri	54.74	0.00e+00	972.00
IUUC-Loc-051867	Lepisosteus oculatus	38.90	0.00e+00	822.00
IUUC-Lma-053138	Leptosphaeria maculans	75.25	0.00e+00	1912.00
IUUC-Laf-053510	Loxodonta africana	48.92	0.00e+00	1214.00
IUUC-Mcc-055836	Macaca mulatta	48.79	0.00e+00	1214.00
IUUC-Meu-056238	Macropus eugenii	51.69	0.00e+00	715.00
IUUC-Mor-057172	Magnaporthe oryzae	86.98	0.00e+00	2204.00
IUUC-Mpo-057300	Magnaporthe poae	85.63	0.00e+00	2141.00
IUUC-Mtr-058248	Medicago truncatula	46.60	0.00e+00	1127.00
IUUC-Mla-059019	Melampsora laricipopulina	56.39	0.00e+00	1417.00
IUUC-Mga-059499	Meleagris gallopavo	48.22	0.00e+00	1210.00
IUUC-Mvi-060336	Microbotryum violaceum	65.25	0.00e+00	1190.00
IUUC-Mmr-061102	Microcebus murinus	48.60	0.00e+00	1204.00
IUUC-Mdo-062594	Monodelphis domestica	49.19	0.00e+00	1225.00
IUUC-Mmu-063736	Mus musculus	48.48	0.00e+00	1205.00
IUUC-Mac-065398	Musa acuminata	44.01	0.00e+00	1019.00
IUUC-Mpu-066701	Mustela putorius furo	47.86	0.00e+00	1203.00
IUUC-Mlu-067392	Myotis lucifugus	48.87	0.00e+00	1213.00
IUUC-Nfi-068270	Neosartorya fischeri	76.37	0.00e+00	1933.00
IUUC-Ncr-068892	Neurospora crassa	86.10	0.00e+00	2171.00
IUUC-Nle-069634	Nomascus leucogenys	60.21	0.00e+00	878.00
IUUC-Opr-070952	Ochotona princeps	37.01	6.00e-164	570.00
IUUC-Ont-072488	Oreochromis niloticus	47.97	0.00e+00	1182.00
IUUC-Ocu-074211	Oryctolagus cuniculus	48.87	0.00e+00	1214.00
IUUC-Oba-075761	Oryza barthii	54.86	0.00e+00	972.00
IUUC-Obr-076429	Oryza brachyantha	54.98	0.00e+00	972.00
IUUC-Ogl-077364	Oryza glaberrima	54.86	0.00e+00	973.00
IUUC-Ogu-078257	Oryza glumaepatula	54.97	0.00e+00	969.00
IUUC-Oin-079274	Oryza indica	54.74	0.00e+00	971.00
IUUC-Olo-080466	Oryza longistaminata	55.00	0.00e+00	964.00
IUUC-Ome-081668	Oryza meridionalis	54.79	0.00e+00	832.00
IUUC-Oni-082874	Oryza nivara	55.10	0.00e+00	972.00
IUUC-Opu-083885	Oryza punctata	54.86	0.00e+00	973.00
IUUC-Oru-084274	Oryza rufipogon	54.74	0.00e+00	971.00
IUUC-Osa-085565	Oryza sativa	54.74	0.00e+00	971.00
IUUC-Ola-086921	Oryzias latipes	48.13	0.00e+00	1182.00
IUUC-Olu-087639	Ostreococcus lucimarinus	47.71	0.00e+00	1147.00
IUUC-Oga-087991	Otolemur garnettii	46.60	0.00e+00	1145.00
IUUC-Oar-089590	Ovis aries	49.03	0.00e+00	1218.00
IUUC-Ptr-090808	Pan troglodytes	48.60	0.00e+00	1216.00
IUUC-Pan-092475	Papio anubis	48.59	0.00e+00	1212.00
IUUC-Psi-093044	Pelodiscus sinensis	52.41	0.00e+00	855.00
IUUC-Pno-094839	Phaeosphaeria nodorum	74.55	0.00e+00	1835.00
IUUC-Ppa-095254	Physcomitrella patens	49.80	0.00e+00	1198.00
IUUC-Pfo-097493	Poecilia formosa	48.55	0.00e+00	1184.00
IUUC-Pab-098497	Pongo abelii	48.87	0.00e+00	1223.00
IUUC-Pop-099992	Populus trichocarpa	55.64	0.00e+00	969.00
IUUC-Pca-100413	Procavia capensis	53.23	2.00e-180	624.00
IUUC-Ppe-101899	Prunus persica	55.82	0.00e+00	979.00
IUUC-Pva-102126	Pteropus vampyrus	47.07	0.00e+00	1152.00
IUUC-Pgr-103376	Puccinia graminis	56.05	0.00e+00	1417.00
IUUC-Ptt-103978	Puccinia triticina	50.48	0.00e+00	1201.00
IUUC-Pte-104126	Pyrenophora teres	73.34	0.00e+00	1811.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	65.99	0.00e+00	1396.00
IUUC-Rno-105428	Rattus norvegicus	49.03	0.00e+00	1215.00
IUUC-Sce-106464	Saccharomyces cerevisiae	51.07	0.00e+00	1222.00
IUUC-Sha-107301	Sarcophilus harrisii	48.49	0.00e+00	1192.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	52.33	0.00e+00	1337.00
IUUC-Spo-108217	Schizosaccharomyces pombe	55.19	0.00e+00	1409.00
IUUC-Ssl-108643	Sclerotinia sclerotiorum	82.59	0.00e+00	2093.00
IUUC-Smo-109582	Selaginella moellendorffii	57.14	0.00e+00	1006.00
IUUC-Sit-109697	Setaria italica	54.62	0.00e+00	972.00
IUUC-Sly-111447	Solanum lycopersicum	46.60	0.00e+00	1118.00
IUUC-Stu-112564	Solanum tuberosum	46.79	0.00e+00	1120.00
IUUC-Sar-113313	Sorex araneus	36.78	2.00e-158	551.00
IUUC-Sbi-114388	Sorghum bicolor	54.62	0.00e+00	972.00
IUUC-Sre-115209	Sporisorium reilianum	62.16	0.00e+00	1126.00
IUUC-Ssc-115933	Sus scrofa	49.03	0.00e+00	1217.00
IUUC-Tgu-117109	Taeniopygia guttata	38.37	1.00e-89	321.00
IUUC-Tru-117772	Takifugu rubripes	48.60	0.00e+00	1169.00
IUUC-Tsy-119105	Tarsius syrichta	47.67	0.00e+00	939.00
IUUC-Tni-120556	Tetraodon nigroviridis	37.55	0.00e+00	756.00
IUUC-Tca-120918	Theobroma cacao	56.42	0.00e+00	982.00
IUUC-Tre-121951	Trichoderma reesei	87.79	0.00e+00	2182.00
IUUC-Tvi-122359	Trichoderma virens	86.72	0.00e+00	2206.00
IUUC-Tae-123611	Triticum aestivum	55.34	0.00e+00	981.00
IUUC-Tur-126754	Triticum urartu	46.22	0.00e+00	1104.00
IUUC-Tme-127170	Tuber melanosporum	74.57	0.00e+00	1937.00
IUUC-Tbe-127882	Tupaia belangeri	63.46	1.00e-122	432.00
IUUC-Ttr-128217	Tursiops truncatus	46.99	0.00e+00	1147.00
IUUC-Uma-129337	Ustilago maydis	61.80	0.00e+00	1121.00
IUUC-Vda-129828	Verticillium dahliae	84.34	0.00e+00	2125.00
IUUC-Vpa-130537	Vicugna pacos	48.39	0.00e+00	1195.00
IUUC-Vvi-130958	Vitis vinifera	55.84	0.00e+00	981.00
IUUC-Xtr-132857	Xenopus tropicalis	47.44	0.00e+00	1131.00
IUUC-Xma-133138	Xiphophorus maculatus	48.71	0.00e+00	1189.00
IUUC-Zma-135612	Zea mays	45.52	0.00e+00	1112.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence