iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134565

Ensembl Protein ID

CAG77978

UniProt Accession

Q6C2E1; Q6C2E1_YARLI

Genbank Protein ID

CAG77978.1

Protein Name

YALI0F08657p

Genbank Nucleotide ID

CR382132

Gene Name

YALI0_F08657g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_F08657g	CAG77978	CAG77978

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-13	48.6	112	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H++ ++c+a  +d t l++G+ +g++ v Dl+
   Q: 112  HSGVIWCIAVsDDgTKLAAGCENGSVVVVDLS 143
           9*********8779****************86 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MDVHRCRFVD YNPAGITALA FSRRSELDQN ASPDLRLAVG RDNGDIEIWN PRWNWLHETT 60
LRGGKGRSVE GLAWSDSGDS SGKPRLFSIG GSTAITEWNV STGQPRVNYD CHSGVIWCIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGTTC ATAGATGCCG TTTTGTGGAC TACAATCCGG CCGGAATCAC GGCGCTGGCG 60
TTCAGCCGAC GCTCCGAGCT GGACCAGAAC GCCTCGCCGG ACCTGAGACT GGCTGTGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0072686--C:mitotic spindle
GO:0032040--C:small-subunit processome
GO:0034455--C:t-UTP complex
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0045943--P:positive regulation of transcription from RNA polymerase I promoter

KEGG

yli:YALI0F08657g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	23.10	2.00e-17	82.40
IUUC-Aml-001310	Ailuropoda melanoleuca	25.37	2.00e-43	168.00
IUUC-Atr-003076	Amborella trichopoda	28.50	4.00e-16	78.20
IUUC-Apl-003367	Anas platyrhynchos	30.59	4.00e-08	48.50
IUUC-Aca-004429	Anolis carolinensis	27.73	5.00e-30	123.00
IUUC-Aly-006271	Arabidopsis lyrata	23.44	5.00e-27	114.00
IUUC-Ath-007331	Arabidopsis thaliana	23.28	1.00e-24	106.00
IUUC-Ago-007843	Ashbya gossypii	38.61	1.00e-131	461.00
IUUC-Acl-008229	Aspergillus clavatus	34.73	3.00e-76	278.00
IUUC-Afl-008438	Aspergillus flavus	34.29	3.00e-73	268.00
IUUC-Afu-008910	Aspergillus fumigatus	35.96	1.00e-74	272.00
IUUC-Ani-009321	Aspergillus nidulans	35.29	3.00e-69	254.00
IUUC-Ang-009592	Aspergillus niger	36.48	1.00e-73	269.00
IUUC-Aor-010220	Aspergillus oryzae	34.29	3.00e-73	268.00
IUUC-Ate-010317	Aspergillus terreus	32.99	2.00e-71	261.00
IUUC-Ame-010957	Astyanax mexicanus	24.83	2.00e-35	141.00
IUUC-Bgr-012057	Blumeria graminis	33.51	4.00e-72	264.00
IUUC-Bta-012473	Bos taurus	25.10	9.00e-42	162.00
IUUC-Bdi-014203	Brachypodium distachyon	22.10	2.00e-18	85.90
IUUC-Bol-016163	Brassica oleracea	25.00	7.00e-33	134.00
IUUC-Bra-017482	Brassica rapa	24.78	2.00e-32	132.00
IUUC-Cja-019942	Callithrix jacchus	25.71	3.00e-43	167.00
IUUC-Cfa-020549	Canis familiaris	28.48	2.00e-38	151.00
IUUC-Cpo-022088	Cavia porcellus	25.40	3.00e-41	160.00
IUUC-Csa-023773	Chlorocebus sabaeus	26.01	6.00e-43	167.00
IUUC-Cho-024302	Choloepus hoffmanni	23.74	3.00e-21	94.70
IUUC-Cin-025384	Ciona intestinalis	25.92	4.00e-49	187.00
IUUC-Dre-027460	Danio rerio	25.34	1.00e-39	156.00
IUUC-Dno-029594	Dasypus novemcinctus	24.79	9.00e-39	153.00
IUUC-Dor-030564	Dipodomys ordii	33.16	2.00e-24	105.00
IUUC-Dse-031179	Dothistroma septosporum	32.54	1.00e-56	212.00
IUUC-Dme-031603	Drosophila melanogaster	22.97	3.00e-25	108.00
IUUC-Ete-032655	Echinops telfairi	25.07	4.00e-34	137.00
IUUC-Eca-033838	Equus caballus	25.91	1.00e-43	169.00
IUUC-Eeu-034548	Erinaceus europaeus	25.50	8.00e-41	159.00
IUUC-Fca-035715	Felis catus	25.23	2.00e-42	164.00
IUUC-Fal-037394	Ficedula albicollis	26.53	4.00e-29	120.00
IUUC-Gmo-039235	Gadus morhua	23.59	4.00e-33	134.00
IUUC-Ggr-040043	Gaeumannomyces graminis	32.82	6.00e-58	217.00
IUUC-Gga-041172	Gallus gallus	27.16	9.00e-44	169.00
IUUC-Gac-042466	Gasterosteus aculeatus	26.92	5.00e-47	180.00
IUUC-Gma-044222	Glycine max	22.27	1.00e-19	90.10
IUUC-Ggo-045416	Gorilla gorilla	24.47	1.00e-34	139.00
IUUC-Hsa-046115	Homo sapiens	25.18	9.00e-37	146.00
IUUC-Hvu-047229	Hordeum vulgare	24.49	9.00e-19	86.70
IUUC-Itr-048015	Ictidomys tridecemlineatus	25.07	5.00e-42	164.00
IUUC-Kpa-049370	Komagataella pastoris	35.43	7.00e-110	389.00
IUUC-Lch-050153	Latimeria chalumnae	24.55	1.00e-40	159.00
IUUC-Lpe-051220	Leersia perrieri	22.62	4.00e-24	104.00
IUUC-Loc-052617	Lepisosteus oculatus	26.24	6.00e-49	186.00
IUUC-Laf-053613	Loxodonta africana	25.03	4.00e-42	164.00
IUUC-Mcc-055707	Macaca mulatta	25.91	3.00e-38	151.00
IUUC-Meu-056800	Macropus eugenii	25.73	5.00e-10	57.40
IUUC-Mor-057245	Magnaporthe oryzae	27.76	1.00e-58	219.00
IUUC-Mpo-057446	Magnaporthe poae	32.16	4.00e-57	214.00
IUUC-Mtr-058748	Medicago truncatula	23.49	3.00e-20	91.70
IUUC-Mga-060018	Meleagris gallopavo	27.14	3.00e-39	154.00
IUUC-Mmr-061115	Microcebus murinus	25.23	7.00e-41	159.00
IUUC-Mdo-062235	Monodelphis domestica	26.08	1.00e-46	179.00
IUUC-Mmu-063158	Mus musculus	25.84	2.00e-44	171.00
IUUC-Mac-065380	Musa acuminata	22.61	4.00e-31	128.00
IUUC-Mpu-065805	Mustela putorius furo	25.50	7.00e-44	170.00
IUUC-Mlu-066951	Myotis lucifugus	25.98	6.00e-43	166.00
IUUC-Nfi-068295	Neosartorya fischeri	35.19	2.00e-75	275.00
IUUC-Ncr-068880	Neurospora crassa	27.32	1.00e-56	213.00
IUUC-Nle-069657	Nomascus leucogenys	25.47	3.00e-43	168.00
IUUC-Opr-070250	Ochotona princeps	26.52	1.00e-41	162.00
IUUC-Ont-072642	Oreochromis niloticus	31.44	5.00e-39	153.00
IUUC-Ocu-074741	Oryctolagus cuniculus	26.03	8.00e-45	173.00
IUUC-Oba-074974	Oryza barthii	22.54	2.00e-23	102.00
IUUC-Obr-076586	Oryza brachyantha	25.43	6.00e-19	87.40
IUUC-Ogl-077782	Oryza glaberrima	23.31	3.00e-23	101.00
IUUC-Ogu-078333	Oryza glumaepatula	23.79	6.00e-21	94.40
IUUC-Oin-079852	Oryza indica	22.70	1.00e-22	100.00
IUUC-Olo-080370	Oryza longistaminata	24.44	4.00e-19	87.80
IUUC-Ome-081442	Oryza meridionalis	22.93	4.00e-21	94.70
IUUC-Oni-082341	Oryza nivara	23.79	1.00e-20	93.20
IUUC-Opu-083824	Oryza punctata	22.96	9.00e-22	97.10
IUUC-Oru-084827	Oryza rufipogon	22.41	4.00e-22	98.20
IUUC-Osa-085742	Oryza sativa	22.79	3.00e-22	98.20
IUUC-Ola-086466	Oryzias latipes	25.89	8.00e-39	153.00
IUUC-Olu-087761	Ostreococcus lucimarinus	26.30	1.00e-22	99.80
IUUC-Oga-088721	Otolemur garnettii	27.33	2.00e-40	158.00
IUUC-Oar-089532	Ovis aries	25.27	9.00e-44	169.00
IUUC-Ptr-091604	Pan troglodytes	25.60	9.00e-43	166.00
IUUC-Pan-092060	Papio anubis	28.61	7.00e-37	145.00
IUUC-Psi-093070	Pelodiscus sinensis	27.85	2.00e-41	161.00
IUUC-Pma-094201	Petromyzon marinus	28.40	4.00e-37	147.00
IUUC-Pno-094924	Phaeosphaeria nodorum	30.86	2.00e-24	105.00
IUUC-Ppa-095282	Physcomitrella patens	29.30	1.00e-32	132.00
IUUC-Pfo-097207	Poecilia formosa	26.18	3.00e-40	157.00
IUUC-Pab-097746	Pongo abelii	25.74	3.00e-42	164.00
IUUC-Pop-099991	Populus trichocarpa	21.81	4.00e-22	98.20
IUUC-Pca-100562	Procavia capensis	29.21	3.00e-13	68.20
IUUC-Ppe-101747	Prunus persica	22.27	9.00e-22	96.70
IUUC-Pva-103054	Pteropus vampyrus	25.03	8.00e-42	163.00
IUUC-Pte-104064	Pyrenophora teres	33.33	7.00e-59	220.00
IUUC-Pyt-104595	Pyrenophora triticirepentis	32.63	3.00e-61	228.00
IUUC-Rno-105155	Rattus norvegicus	25.71	9.00e-43	166.00
IUUC-Sce-106369	Saccharomyces cerevisiae	36.81	2.00e-133	468.00
IUUC-Sha-107149	Sarcophilus harrisii	26.05	4.00e-47	181.00
IUUC-Sja-107777	Schizosaccharomyces japonicus	38.44	4.00e-128	449.00
IUUC-Spo-108372	Schizosaccharomyces pombe	37.85	2.00e-126	444.00
IUUC-Ssl-108650	Sclerotinia sclerotiorum	32.70	3.00e-70	258.00
IUUC-Smo-109670	Selaginella moellendorffii	24.93	1.00e-36	146.00
IUUC-Sit-110454	Setaria italica	24.44	7.00e-21	94.00
IUUC-Sly-111020	Solanum lycopersicum	22.86	2.00e-24	105.00
IUUC-Stu-112330	Solanum tuberosum	23.43	3.00e-27	115.00
IUUC-Sar-113254	Sorex araneus	33.16	5.00e-24	103.00
IUUC-Sbi-114624	Sorghum bicolor	25.27	1.00e-21	96.70
IUUC-Sre-114985	Sporisorium reilianum	27.46	7.00e-23	100.00
IUUC-Tgu-117407	Taeniopygia guttata	28.27	4.00e-24	103.00
IUUC-Tru-118733	Takifugu rubripes	30.14	9.00e-38	149.00
IUUC-Tsy-119213	Tarsius syrichta	29.96	1.00e-25	109.00
IUUC-Tni-120894	Tetraodon nigroviridis	30.45	2.00e-32	130.00
IUUC-Tca-121606	Theobroma cacao	29.47	1.00e-15	76.60
IUUC-Tre-121958	Trichoderma reesei	31.47	4.00e-58	217.00
IUUC-Tvi-122290	Trichoderma virens	32.28	9.00e-60	223.00
IUUC-Tae-125441	Triticum aestivum	22.22	3.00e-19	88.60
IUUC-Tme-126995	Tuber melanosporum	36.25	6.00e-75	273.00
IUUC-Tbe-127605	Tupaia belangeri	29.95	6.00e-15	73.90
IUUC-Ttr-128720	Tursiops truncatus	24.97	1.00e-43	169.00
IUUC-Uma-129564	Ustilago maydis	26.87	8.00e-22	97.40
IUUC-Vpa-130412	Vicugna pacos	32.70	3.00e-31	128.00
IUUC-Vvi-131256	Vitis vinifera	25.27	2.00e-22	99.00
IUUC-Xtr-131828	Xenopus tropicalis	25.65	1.00e-44	172.00
IUUC-Xma-133394	Xiphophorus maculatus	27.03	8.00e-40	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence