iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005464

Ensembl Protein ID

fgenesh2_kg.3__492__AT3G05090.2

UniProt Accession

D7L3Q2; D7L3Q2_ARALL

Genbank Protein ID

EFH60749.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348715

Gene Name

LRS1; ARALYDRAFT_477791

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__492__AT3G05090.2	fgenesh2_kg.3__492__AT3G05090.2	fgenesh2_kg.3__492__AT3G05090.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-34	115.5	212	249
UBD/Beta-Prp	3.10e-46	158.6	46	365

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++sv++la  ++ t+lvsG+  ++++vWD+rtg ++
   Q: 212  GHKESVYALAMnDTgTMLVSGGTEKVLRVWDPRTGSKT 249
           8**********7447*******************9875 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvw.dlstgkcvhtl 90
             +s+d+s+l+tgsrdgt+k w +++  +   +++++h + v++  +  ++ +lv++s+D t+k w  ls+g c++tl
   Q: 46   SSVSNDQSYLFTGSRDGTLKRWAFDEDATfcSATFESHVDWVNDAALAGES-TLVSCSSDTTVKTWdGLSDGVCTRTL 122
           4459********************9988777999****************8.9*************669********* PP
   S: 91   kghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee.................................... 131
           ++h+d+v++l++ + +++ ++sG+    + +wd+e      +                                    
   Q: 123  RQHSDYVTCLAVAAkNSNLVASGGLGGEVFIWDIEAALSPVTkpndanedssssngvnvpvtslrtvgssnnisvqss 200
           **************666999***************9877777798888888888888888888888888888888888 PP
   S: 132  ........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsld 201
                   + +gh+++v  ++++++g +lvsG++ +++r+Wd +tg+   +l+g htd v+ l +ds+g++++sgs d
   Q: 201  pshgytptIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKTMKLRG-HTDNVRVLLLDSTGRFCLSGSSD 277
           888888888888888888888888888888888888888888888888888888.88888888888888888888888 PP
   S: 202  gtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnv 279
           + ++lwdl +++c++t+  htd v+ ++ +p   +++sg+ D+ +++ dl +++ +   ++++    +++ l ++dn 
   Q: 278  SMIRLWDLGQQRCLHTYAVHTDSVWALACTPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEH----PIQQLALQDNS 351
           888888888888888888888888888888888888888888888888888888888888888....67777777777 PP
   S: 280  lvlgsedskvniwk 293
           +  ++ ds+v+ w 
   Q: 352  IWVATTDSSVEKWP 365
           77777777777776 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MHRVGSAGSN GGSVRTRKEK KLTYVLNDAN DTKHCAGINC LDVLKSSVSN DQSYLFTGSR 60
DGTLKRWAFD EDATFCSATF ESHVDWVNDA ALAGESTLVS CSSDTTVKTW DGLSDGVCTR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGATTTTAC CAAGTCTCGA GCCTTTGAGA GAAGAGAGTT TTGTGGTTTC CTTGAAGGAA 60
AAAAAAAAAA CACTTTTTTT TTGGTTTCTT CTTCATCTTC TTCCAATTCT TCAAACGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021772--DUF3337
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11816--DUF3337
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0010311--P:lateral root formation

KEGG

aly:ARALYDRAFT_477791

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001160	Aegilops tauschii	72.37	0.00e+00	764.00
IUUC-Aml-001533	Ailuropoda melanoleuca	33.89	4.00e-98	351.00
IUUC-Atr-003009	Amborella trichopoda	69.54	0.00e+00	1084.00
IUUC-Apl-003709	Anas platyrhynchos	41.88	3.00e-67	248.00
IUUC-Aca-004875	Anolis carolinensis	33.85	2.00e-99	356.00
IUUC-Ath-006969	Arabidopsis thaliana	95.95	0.00e+00	1379.00
IUUC-Acl-008203	Aspergillus clavatus	30.83	8.00e-58	218.00
IUUC-Afl-008571	Aspergillus flavus	29.80	9.00e-57	214.00
IUUC-Afu-009072	Aspergillus fumigatus	32.29	3.00e-37	149.00
IUUC-Ani-009413	Aspergillus nidulans	30.19	5.00e-56	212.00
IUUC-Ang-009571	Aspergillus niger	30.23	4.00e-57	216.00
IUUC-Aor-010064	Aspergillus oryzae	29.80	5.00e-57	215.00
IUUC-Ate-010463	Aspergillus terreus	30.73	3.00e-57	216.00
IUUC-Ame-010772	Astyanax mexicanus	33.38	6.00e-87	314.00
IUUC-Bgr-012288	Blumeria graminis	29.83	4.00e-61	229.00
IUUC-Bta-013379	Bos taurus	33.80	1.00e-97	350.00
IUUC-Bci-013859	Botrytis cinerea	29.43	1.00e-61	230.00
IUUC-Bdi-014645	Brachypodium distachyon	67.32	0.00e+00	1021.00
IUUC-Bol-016450	Brassica oleracea	88.34	0.00e+00	1285.00
IUUC-Bra-017253	Brassica rapa	89.08	0.00e+00	1295.00
IUUC-Cel-018656	Caenorhabditis elegans	29.02	1.00e-76	280.00
IUUC-Cja-018804	Callithrix jacchus	33.55	9.00e-98	350.00
IUUC-Cfa-020076	Canis familiaris	33.80	6.00e-98	350.00
IUUC-Cpo-021721	Cavia porcellus	33.55	2.00e-96	346.00
IUUC-Cre-022779	Chlamydomonas reinhardtii	36.42	9.00e-48	185.00
IUUC-Csa-023188	Chlorocebus sabaeus	33.80	6.00e-98	350.00
IUUC-Cho-024932	Choloepus hoffmanni	33.38	9.00e-94	337.00
IUUC-Cin-025591	Ciona intestinalis	31.64	5.00e-88	318.00
IUUC-Cgl-026540	Colletotrichum gloeosporioides	30.43	7.00e-17	82.40
IUUC-Cne-026819	Cryptococcus neoformans	29.30	2.00e-28	120.00
IUUC-Cme-027188	Cyanidioschyzon merolae	31.27	4.00e-69	255.00
IUUC-Dre-028370	Danio rerio	33.29	2.00e-99	355.00
IUUC-Dno-029960	Dasypus novemcinctus	33.29	2.00e-96	346.00
IUUC-Dor-030933	Dipodomys ordii	39.76	6.00e-71	260.00
IUUC-Dse-031532	Dothistroma septosporum	32.23	2.00e-41	164.00
IUUC-Dme-032168	Drosophila melanogaster	27.94	1.00e-70	260.00
IUUC-Ete-033107	Echinops telfairi	32.23	2.00e-87	315.00
IUUC-Eca-034028	Equus caballus	33.93	5.00e-98	351.00
IUUC-Eeu-034894	Erinaceus europaeus	37.83	1.00e-80	293.00
IUUC-Fca-035619	Felis catus	38.40	4.00e-87	314.00
IUUC-Fal-036869	Ficedula albicollis	34.39	4.00e-99	355.00
IUUC-Fox-037907	Fusarium oxysporum	31.69	1.00e-42	167.00
IUUC-Fso-038101	Fusarium solani	28.60	5.00e-54	205.00
IUUC-Gmo-038627	Gadus morhua	33.55	3.00e-99	355.00
IUUC-Ggr-039995	Gaeumannomyces graminis	27.92	7.00e-37	149.00
IUUC-Gga-040555	Gallus gallus	34.45	7.00e-101	360.00
IUUC-Gac-042497	Gasterosteus aculeatus	33.25	1.00e-98	353.00
IUUC-Gma-043327	Glycine max	71.65	0.00e+00	1120.00
IUUC-Ggo-045561	Gorilla gorilla	33.80	6.00e-98	350.00
IUUC-Hsa-045710	Homo sapiens	33.80	6.00e-98	350.00
IUUC-Hvu-047730	Hordeum vulgare	68.04	0.00e+00	734.00
IUUC-Itr-049030	Ictidomys tridecemlineatus	33.52	9.00e-62	230.00
IUUC-Kpa-049237	Komagataella pastoris	32.11	1.00e-27	117.00
IUUC-Lch-049507	Latimeria chalumnae	33.68	1.00e-96	347.00
IUUC-Lpe-051608	Leersia perrieri	64.90	0.00e+00	967.00
IUUC-Loc-052373	Lepisosteus oculatus	32.35	1.00e-89	323.00
IUUC-Lma-053025	Leptosphaeria maculans	32.23	8.00e-43	168.00
IUUC-Laf-053706	Loxodonta africana	33.86	3.00e-96	345.00
IUUC-Mcc-055046	Macaca mulatta	33.80	6.00e-98	350.00
IUUC-Meu-056840	Macropus eugenii	34.96	7.00e-28	118.00
IUUC-Mor-057284	Magnaporthe oryzae	28.18	9.00e-57	214.00
IUUC-Mpo-057418	Magnaporthe poae	28.24	1.00e-35	144.00
IUUC-Mtr-058384	Medicago truncatula	70.22	0.00e+00	1025.00
IUUC-Mla-059101	Melampsora laricipopulina	34.27	1.00e-39	158.00
IUUC-Mga-059297	Meleagris gallopavo	34.45	7.00e-101	360.00
IUUC-Mvi-060419	Microbotryum violaceum	32.22	5.00e-34	139.00
IUUC-Mmr-061196	Microcebus murinus	35.28	2.00e-78	286.00
IUUC-Mdo-062762	Monodelphis domestica	33.71	1.00e-97	350.00
IUUC-Mmu-063915	Mus musculus	34.06	1.00e-98	353.00
IUUC-Mac-065434	Musa acuminata	68.09	0.00e+00	1056.00
IUUC-Mpu-065999	Mustela putorius furo	38.65	2.00e-83	301.00
IUUC-Mlu-068226	Myotis lucifugus	33.80	1.00e-97	350.00
IUUC-Nfi-068416	Neosartorya fischeri	31.32	6.00e-57	215.00
IUUC-Ncr-068825	Neurospora crassa	28.81	2.00e-59	223.00
IUUC-Nle-069416	Nomascus leucogenys	33.80	6.00e-98	350.00
IUUC-Opr-070515	Ochotona princeps	32.39	3.00e-87	315.00
IUUC-Ont-072052	Oreochromis niloticus	32.52	2.00e-95	343.00
IUUC-Oan-073636	Ornithorhynchus anatinus	33.99	4.00e-97	348.00
IUUC-Ocu-074799	Oryctolagus cuniculus	33.80	5.00e-98	351.00
IUUC-Oba-075146	Oryza barthii	65.16	0.00e+00	972.00
IUUC-Obr-076699	Oryza brachyantha	65.54	0.00e+00	986.00
IUUC-Ogl-077883	Oryza glaberrima	65.02	4.00e-180	623.00
IUUC-Ogu-078114	Oryza glumaepatula	60.55	0.00e+00	863.00
IUUC-Oin-079575	Oryza indica	65.93	0.00e+00	991.00
IUUC-Olo-080531	Oryza longistaminata	63.14	0.00e+00	934.00
IUUC-Ome-081368	Oryza meridionalis	61.40	0.00e+00	892.00
IUUC-Oni-082457	Oryza nivara	65.16	0.00e+00	973.00
IUUC-Opu-084050	Oryza punctata	65.16	0.00e+00	959.00
IUUC-Oru-084330	Oryza rufipogon	65.16	0.00e+00	972.00
IUUC-Osa-085408	Oryza sativa	65.93	0.00e+00	991.00
IUUC-Ola-087546	Oryzias latipes	33.12	2.00e-98	352.00
IUUC-Olu-087710	Ostreococcus lucimarinus	32.35	9.00e-97	347.00
IUUC-Oga-087998	Otolemur garnettii	34.12	4.00e-97	348.00
IUUC-Oar-090303	Ovis aries	33.80	1.00e-97	350.00
IUUC-Ptr-090588	Pan troglodytes	33.80	6.00e-98	350.00
IUUC-Pan-092722	Papio anubis	33.80	6.00e-98	350.00
IUUC-Psi-093911	Pelodiscus sinensis	33.50	2.00e-98	352.00
IUUC-Pma-094580	Petromyzon marinus	33.64	2.00e-98	352.00
IUUC-Pno-095085	Phaeosphaeria nodorum	30.36	3.00e-57	216.00
IUUC-Ppa-095594	Physcomitrella patens	59.20	0.00e+00	860.00
IUUC-Pfo-096994	Poecilia formosa	33.67	2.00e-97	348.00
IUUC-Pab-097586	Pongo abelii	33.63	4.00e-98	351.00
IUUC-Pop-099389	Populus trichocarpa	73.48	0.00e+00	1134.00
IUUC-Pca-100458	Procavia capensis	37.75	8.00e-36	144.00
IUUC-Ppe-102060	Prunus persica	74.32	0.00e+00	1120.00
IUUC-Pva-102698	Pteropus vampyrus	38.94	2.00e-87	316.00
IUUC-Pgr-103649	Puccinia graminis	33.23	4.00e-35	143.00
IUUC-Ptt-103910	Puccinia triticina	31.25	2.00e-39	157.00
IUUC-Pte-104181	Pyrenophora teres	31.91	2.00e-41	164.00
IUUC-Pyt-104439	Pyrenophora triticirepentis	31.38	2.00e-41	164.00
IUUC-Rno-104978	Rattus norvegicus	34.30	1.00e-97	349.00
IUUC-Sha-107079	Sarcophilus harrisii	35.21	3.00e-93	335.00
IUUC-Sja-107716	Schizosaccharomyces japonicus	28.72	8.00e-59	221.00
IUUC-Spo-108325	Schizosaccharomyces pombe	29.45	2.00e-50	194.00
IUUC-Ssl-108542	Sclerotinia sclerotiorum	29.42	8.00e-59	221.00
IUUC-Smo-109427	Selaginella moellendorffii	57.76	0.00e+00	857.00
IUUC-Sit-110755	Setaria italica	66.97	0.00e+00	982.00
IUUC-Sly-111099	Solanum lycopersicum	72.86	0.00e+00	1031.00
IUUC-Sar-113408	Sorex araneus	38.41	1.00e-75	276.00
IUUC-Sbi-113789	Sorghum bicolor	65.55	0.00e+00	978.00
IUUC-Sre-114998	Sporisorium reilianum	33.61	1.00e-42	168.00
IUUC-Ssc-115434	Sus scrofa	33.80	6.00e-98	350.00
IUUC-Tgu-116517	Taeniopygia guttata	34.19	2.00e-100	359.00
IUUC-Tru-118174	Takifugu rubripes	33.25	3.00e-99	355.00
IUUC-Tsy-118935	Tarsius syrichta	34.06	4.00e-97	348.00
IUUC-Tni-119744	Tetraodon nigroviridis	33.46	8.00e-98	350.00
IUUC-Tca-121360	Theobroma cacao	74.32	0.00e+00	1143.00
IUUC-Tre-122198	Trichoderma reesei	26.85	1.00e-50	194.00
IUUC-Tvi-122389	Trichoderma virens	30.95	1.00e-41	164.00
IUUC-Tae-125335	Triticum aestivum	67.18	0.00e+00	1015.00
IUUC-Tur-126699	Triticum urartu	66.97	0.00e+00	1016.00
IUUC-Tme-126932	Tuber melanosporum	25.16	4.00e-43	169.00
IUUC-Tbe-127267	Tupaia belangeri	40.50	1.00e-43	170.00
IUUC-Ttr-129153	Tursiops truncatus	34.19	2.00e-99	355.00
IUUC-Uma-129604	Ustilago maydis	33.95	5.00e-40	159.00
IUUC-Vda-129925	Verticillium dahliae	32.11	8.00e-41	162.00
IUUC-Vpa-130553	Vicugna pacos	37.30	2.00e-84	306.00
IUUC-Vvi-130995	Vitis vinifera	73.92	0.00e+00	1117.00
IUUC-Xtr-132346	Xenopus tropicalis	32.26	1.00e-97	350.00
IUUC-Xma-133654	Xiphophorus maculatus	41.33	1.00e-64	239.00
IUUC-Yli-134451	Yarrowia lipolytica	28.11	2.00e-23	103.00
IUUC-Zma-135647	Zea mays	66.84	0.00e+00	986.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence