iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043984

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000838

Gene Name

LOC100818422; GLYMA_05G010900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA05G08200	GLYMA05G08200.1	GLYMA05G08200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.70e-26	90.5	146	183
UBD/Beta-Prp	1.80e-44	153.7	28	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           +sv+ +a+  sd t+l+s++d g +++WD+r+g+ +++
   Q: 146  GSVRTVAWlhSDqTILSSCTDMGGVRLWDVRSGKIVQT 183
           68*******999666666666699*********99985 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG 112
           +pd+ +l+++s+d++  + + +tg+ + +++gh+++v++++++ ++   +t+s D   kvwd  tg+ +h+++ h++ v++++fs++++ l++G
   Q: 28   TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTSALRAATASADFSTKVWDALTGDELHSFE-HKHIVRACAFSEDTHLLLTG 120
           89999*****************************************9**************************.******************** PP
   S: 113  shdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvk 205
           +  +++r++d++         ++  g+v++v++  ++  +l s+++ + vrlWd+++gk+++tl+   ++sv+s +++++g+++ + ++ +tvk
   Q: 121  GVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDqTILSSCTDMGGVRLWDVRSGKIVQTLET--KSSVTSAEVSQDGRYITT-ADGSTVK 211
           ***********9988777766666667766666555538888888889****************75..************977655.6789*** PP
   S: 206  lwdlq 210
           +wd  
   Q: 212  FWDAN 216
           ***75 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEKKKVAVPL VCHGHSRPVV DLFYSPVTPD GFFLISASKD SSPMLRNGET GDWIGTFEGH 60
KGAVWSCCLD TSALRAATAS ADFSTKVWDA LTGDELHSFE HKHIVRACAF SEDTHLLLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTGGCTTT GGGGTGGAGT GGGGTCCACA ATCCACCATC TCCATCAGAT CCAAACCCAA 60
CGTAACCTGG CTTCGTGCCT ATCCTCCACC CTCAACACAG CCTTCCTTTC CTCTTCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

gmx:100818422

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002571	Amborella trichopoda	84.27	1.00e-172	598.00
IUUC-Aly-006421	Arabidopsis lyrata	82.56	4.00e-171	593.00
IUUC-Ath-007376	Arabidopsis thaliana	81.98	2.00e-171	594.00
IUUC-Acl-008014	Aspergillus clavatus	40.92	4.00e-54	204.00
IUUC-Afl-008701	Aspergillus flavus	39.79	2.00e-44	172.00
IUUC-Afu-008942	Aspergillus fumigatus	33.15	1.00e-43	170.00
IUUC-Ani-009394	Aspergillus nidulans	41.18	2.00e-56	213.00
IUUC-Ang-009593	Aspergillus niger	38.72	3.00e-41	162.00
IUUC-Aor-010206	Aspergillus oryzae	41.36	3.00e-57	215.00
IUUC-Ame-011328	Astyanax mexicanus	52.22	1.00e-78	286.00
IUUC-Bgr-012308	Blumeria graminis	40.29	5.00e-64	238.00
IUUC-Bta-013429	Bos taurus	50.86	2.00e-78	285.00
IUUC-Bci-013803	Botrytis cinerea	37.46	1.00e-56	213.00
IUUC-Bdi-014996	Brachypodium distachyon	82.46	1.00e-172	598.00
IUUC-Bol-016600	Brassica oleracea	80.23	7.00e-167	579.00
IUUC-Bra-016777	Brassica rapa	80.81	7.00e-167	579.00
IUUC-Cre-022806	Chlamydomonas reinhardtii	53.61	7.00e-86	310.00
IUUC-Cin-025541	Ciona intestinalis	48.97	1.00e-78	286.00
IUUC-Csv-026287	Ciona savignyi	47.06	7.00e-76	276.00
IUUC-Cgl-026513	Colletotrichum gloeosporioides	38.79	2.00e-54	206.00
IUUC-Cne-026869	Cryptococcus neoformans	44.74	4.00e-68	251.00
IUUC-Dme-031857	Drosophila melanogaster	49.32	4.00e-79	287.00
IUUC-Eca-033934	Equus caballus	50.86	2.00e-78	286.00
IUUC-Eeu-034650	Erinaceus europaeus	41.58	8.00e-62	230.00
IUUC-Fca-035909	Felis catus	50.86	2.00e-77	282.00
IUUC-Fox-037780	Fusarium oxysporum	39.82	2.00e-55	209.00
IUUC-Fso-038197	Fusarium solani	39.94	1.00e-50	193.00
IUUC-Ggr-040054	Gaeumannomyces graminis	37.76	3.00e-54	205.00
IUUC-Gac-041876	Gasterosteus aculeatus	50.34	3.00e-75	275.00
IUUC-Ggo-044583	Gorilla gorilla	50.00	1.00e-73	270.00
IUUC-Lch-050078	Latimeria chalumnae	52.05	6.00e-81	294.00
IUUC-Lma-053226	Leptosphaeria maculans	44.83	9.00e-60	223.00
IUUC-Laf-054053	Loxodonta africana	51.55	1.00e-79	290.00
IUUC-Mcc-054652	Macaca mulatta	48.52	2.00e-75	275.00
IUUC-Mor-057256	Magnaporthe oryzae	37.76	1.00e-52	200.00
IUUC-Mpo-057303	Magnaporthe poae	37.54	6.00e-55	207.00
IUUC-Mtr-058421	Medicago truncatula	89.29	0.00e+00	632.00
IUUC-Mla-059073	Melampsora laricipopulina	44.98	2.00e-67	249.00
IUUC-Mga-059664	Meleagris gallopavo	51.37	5.00e-77	281.00
IUUC-Mmu-064092	Mus musculus	50.86	2.00e-78	285.00
IUUC-Nfi-068553	Neosartorya fischeri	40.74	2.00e-54	206.00
IUUC-Ncr-068934	Neurospora crassa	38.86	2.00e-51	196.00
IUUC-Ont-072663	Oreochromis niloticus	50.00	2.00e-71	262.00
IUUC-Ocu-074942	Oryctolagus cuniculus	50.86	2.00e-78	286.00
IUUC-Oba-075160	Oryza barthii	84.48	6.00e-173	599.00
IUUC-Obr-076864	Oryza brachyantha	81.27	1.00e-170	592.00
IUUC-Ogl-077076	Oryza glaberrima	84.18	7.00e-173	599.00
IUUC-Ogu-078591	Oryza glumaepatula	84.48	6.00e-173	599.00
IUUC-Oin-079631	Oryza indica	82.51	3.00e-172	597.00
IUUC-Olo-080389	Oryza longistaminata	82.07	1.00e-123	435.00
IUUC-Ome-081693	Oryza meridionalis	81.82	2.00e-170	591.00
IUUC-Oni-082190	Oryza nivara	83.88	2.00e-172	597.00
IUUC-Opu-084163	Oryza punctata	82.32	2.00e-174	604.00
IUUC-Oru-084730	Oryza rufipogon	84.48	6.00e-173	599.00
IUUC-Osa-086010	Oryza sativa	84.02	2.00e-173	601.00
IUUC-Ola-086704	Oryzias latipes	51.20	3.00e-78	285.00
IUUC-Olu-087796	Ostreococcus lucimarinus	58.90	5.00e-101	360.00
IUUC-Oar-090398	Ovis aries	50.86	2.00e-78	286.00
IUUC-Psi-093863	Pelodiscus sinensis	48.69	1.00e-66	246.00
IUUC-Pno-095075	Phaeosphaeria nodorum	44.97	1.00e-61	229.00
IUUC-Ppa-095206	Physcomitrella patens	70.18	4.00e-142	497.00
IUUC-Pfo-096438	Poecilia formosa	53.08	2.00e-81	295.00
IUUC-Pab-097994	Pongo abelii	50.86	2.00e-78	285.00
IUUC-Ppe-102035	Prunus persica	90.00	0.00e+00	639.00
IUUC-Pva-102794	Pteropus vampyrus	47.42	4.00e-69	254.00
IUUC-Pgr-103581	Puccinia graminis	45.31	1.00e-67	249.00
IUUC-Ptt-103862	Puccinia triticina	45.87	1.00e-66	246.00
IUUC-Pte-104245	Pyrenophora teres	44.97	9.00e-63	233.00
IUUC-Pyt-104537	Pyrenophora triticirepentis	44.97	9.00e-63	233.00
IUUC-Rno-105712	Rattus norvegicus	50.86	2.00e-78	285.00
IUUC-Ssl-108655	Sclerotinia sclerotiorum	37.76	6.00e-56	211.00
IUUC-Smo-108784	Selaginella moellendorffii	70.97	4.00e-140	490.00
IUUC-Sit-110760	Setaria italica	82.16	1.00e-172	598.00
IUUC-Sly-111555	Solanum lycopersicum	78.26	7.00e-164	569.00
IUUC-Sbi-113932	Sorghum bicolor	82.35	5.00e-171	593.00
IUUC-Sre-115008	Sporisorium reilianum	42.86	5.00e-62	231.00
IUUC-Ssc-116392	Sus scrofa	48.36	9.00e-75	273.00
IUUC-Tgu-116835	Taeniopygia guttata	49.43	8.00e-64	237.00
IUUC-Tru-117558	Takifugu rubripes	52.05	3.00e-79	288.00
IUUC-Tni-120330	Tetraodon nigroviridis	52.90	2.00e-77	282.00
IUUC-Tca-121759	Theobroma cacao	88.83	0.00e+00	654.00
IUUC-Tre-122163	Trichoderma reesei	37.76	2.00e-48	186.00
IUUC-Tvi-122609	Trichoderma virens	37.76	9.00e-53	200.00
IUUC-Tae-123833	Triticum aestivum	81.87	3.00e-170	590.00
IUUC-Tur-126808	Triticum urartu	73.98	3.00e-144	504.00
IUUC-Tme-127137	Tuber melanosporum	46.08	1.00e-64	239.00
IUUC-Ttr-128202	Tursiops truncatus	50.86	2.00e-78	285.00
IUUC-Uma-129433	Ustilago maydis	45.31	2.00e-64	239.00
IUUC-Vda-129675	Verticillium dahliae	39.05	5.00e-55	207.00
IUUC-Vvi-131432	Vitis vinifera	87.50	0.00e+00	637.00
IUUC-Xtr-132648	Xenopus tropicalis	50.00	1.00e-72	266.00
IUUC-Xma-133969	Xiphophorus maculatus	48.97	2.00e-71	262.00
IUUC-Yli-134670	Yarrowia lipolytica	37.25	1.00e-49	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence