iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006847

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative U-box domain-containing protein 47; Plant U-box protein 47; RING-type E3 ubiquitin transferase PUB47

Genbank Nucleotide ID

AC051626

Gene Name

PUB47; At5g18330; F20L16.50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G18330	AT5G18330.1	AT5G18330.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-20	74.3	64	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           evp+ef+C++s+++M +P+ ++sG+t+++s+I +wl++ ++ cP t+q l ++ ++Pn+ + ++i++wc  +
   Q: 64   EVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHERT-CPRTKQVLYHRFMIPNHLINEVIKEWCLIH 134
           69*********************************999998.***************************765 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Functions as an E3 ubiquitin ligase.

Protein Sequence
(Fasta)

MADSTADEST NADTLWRELH KVLPEIWYDG GGKDHCEIDE AIRILTCLRK IESKNPESDI 60
SPVEVPKEFI CTLSNKIMIE PMLIASGQTF EKSYILEWLK HERTCPRTKQ VLYHRFMIPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGATT CGACGGCGGA CGAGTCAACA AACGCTGATA CTCTGTGGCG GGAGTTACAC 60
AAGGTACTGC CGGAGATTTG GTACGACGGA GGAGGCAAAG ATCACTGTGA GATTGATGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ath:AT5G18330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005647	Arabidopsis lyrata	75.28	0.00e+00	654.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence