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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018664
UUCD1 version UUC-CaE-00218
Ensembl Protein ID Y53C12B.1
UniProt Accession O18215; O18215_CAEEL
Genbank Protein ID CAB16490.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID BX284602
Gene Name Y53C12B.1; CELE_Y53C12B.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00013143 Y53C12B.1 Y53C12B.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.50e-41 138.8 108 146
UBD/Beta-Prp 3.90e-68 230.1 473 636
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclafsd..tllvsGsdDgtikvWDlrtgvllks 38
           Ht+++  ++f++  +ll++Gs D+ +kvW+l+++ ++++
   Q: 108  HTAPILVMEFNEegHLLATGSADHIVKVWNLTEQQCTHT 146
           999999999*4446889******************9985 PP
   

   UBD/Beta-Prp
   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           + +h + ++cv++s+++ l+atg++d+ +k+w+v+t k+      +lsgh  +v +vkf +++  l+++s D+tik+w++s  +c++t++gh+  v  + 
   Q: 473  MVAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMqlgiAGTLSGHRRGVGDVKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISGHSCAVFRVI 572
           4566677788999999999999999999999999999999998899999999999999999999999999999999999999999999999999999999 PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl 166
           f ++++ l+s+++  +i++w ++t  c     + h++ +++++ + +++ +v++++D+ + +W+ 
   Q: 573  FARNDSQLISADSAGIIKIWTIKTADCEC-SIDAHTDKIWSLSKNHNESEFVTAGTDGRIVVWKD 636
           99999999999999999999999999998.77888889999999999999999999999999965 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MTEPIKEIAA KRSVEAVYTG GTVRWSANGQ KLFSTCTNVV KVIDLADNTA SYTIGDPEDE 60
LRITCTAVDK NRNRLLVAYN NQIIREYSIP LDPSTTKPEL ARTWKTIHTA PILVMEFNEE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018664|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGACTGAAC CTATCAAGGA AATTGCCGCG AAAAGAAGTG TCGAAGCAGT TTACACCGGA 60
GGAACTGTCA GATGGAGTGC AAATGGTCAG AAACTTTTTT CTACATGCAC AAATGTTGTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018664|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08625--Utp13
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG cel:CELE_Y53C12B.1
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000765 Aegilops tauschii 26.28 3.00e-78 285.00
IUUC-Aml-002376 Ailuropoda melanoleuca 30.68 7.00e-116 410.00
IUUC-Atr-002486 Amborella trichopoda 27.45 1.00e-88 320.00
IUUC-Apl-003519 Anas platyrhynchos 32.43 1.00e-102 365.00
IUUC-Aca-004957 Anolis carolinensis 39.56 4.00e-44 169.00
IUUC-Aly-006152 Arabidopsis lyrata 27.68 1.00e-86 313.00
IUUC-Ath-006966 Arabidopsis thaliana 27.57 3.00e-87 315.00
IUUC-Ago-007746 Ashbya gossypii 27.97 5.00e-90 324.00
IUUC-Acl-008009 Aspergillus clavatus 25.34 1.00e-68 253.00
IUUC-Afl-008681 Aspergillus flavus 24.79 1.00e-57 216.00
IUUC-Afu-008798 Aspergillus fumigatus 25.19 3.00e-62 232.00
IUUC-Ani-009278 Aspergillus nidulans 24.84 2.00e-67 249.00
IUUC-Ang-009640 Aspergillus niger 26.77 5.00e-70 258.00
IUUC-Aor-010160 Aspergillus oryzae 24.97 4.00e-57 215.00
IUUC-Ate-010320 Aspergillus terreus 25.29 3.00e-68 252.00
IUUC-Bgr-012054 Blumeria graminis 25.51 2.00e-66 246.00
IUUC-Bta-012611 Bos taurus 32.04 1.00e-110 392.00
IUUC-Bci-013797 Botrytis cinerea 27.99 7.00e-82 297.00
IUUC-Bdi-014384 Brachypodium distachyon 27.81 1.00e-92 333.00
IUUC-Bol-015097 Brassica oleracea 27.72 8.00e-84 303.00
IUUC-Bra-017328 Brassica rapa 27.36 1.00e-83 303.00
IUUC-Cja-019092 Callithrix jacchus 31.17 7.00e-116 410.00
IUUC-Cfa-021040 Canis familiaris 31.12 2.00e-114 405.00
IUUC-Cpo-022529 Cavia porcellus 32.09 3.00e-111 394.00
IUUC-Cre-022986 Chlamydomonas reinhardtii 39.01 7.00e-29 117.00
IUUC-Csa-024205 Chlorocebus sabaeus 30.60 1.00e-112 399.00
IUUC-Cin-025560 Ciona intestinalis 30.55 1.00e-106 379.00
IUUC-Cgl-026481 Colletotrichum gloeosporioides 25.77 4.00e-76 278.00
IUUC-Cne-027082 Cryptococcus neoformans 25.89 4.00e-87 315.00
IUUC-Cme-027159 Cyanidioschyzon merolae 23.68 1.00e-29 124.00
IUUC-Dre-028138 Danio rerio 28.99 1.00e-101 362.00
IUUC-Dno-029914 Dasypus novemcinctus 27.59 9.00e-64 236.00
IUUC-Dor-030685 Dipodomys ordii 29.65 3.00e-62 231.00
IUUC-Dse-031429 Dothistroma septosporum 24.82 4.00e-71 261.00
IUUC-Dme-031995 Drosophila melanogaster 28.75 2.00e-92 332.00
IUUC-Ete-033086 Echinops telfairi 38.19 5.00e-80 291.00
IUUC-Eca-034354 Equus caballus 30.84 9.00e-107 380.00
IUUC-Eeu-034832 Erinaceus europaeus 35.23 6.00e-78 284.00
IUUC-Fca-036136 Felis catus 30.30 2.00e-106 378.00
IUUC-Fal-036859 Ficedula albicollis 31.60 3.00e-115 408.00
IUUC-Fox-037863 Fusarium oxysporum 25.98 1.00e-69 256.00
IUUC-Fso-038389 Fusarium solani 25.20 2.00e-71 262.00
IUUC-Gmo-038711 Gadus morhua 27.41 2.00e-52 199.00
IUUC-Ggr-039820 Gaeumannomyces graminis 26.10 9.00e-73 267.00
IUUC-Gga-040263 Gallus gallus 32.02 1.00e-115 409.00
IUUC-Gac-041291 Gasterosteus aculeatus 31.17 5.00e-120 424.00
IUUC-Gma-044328 Glycine max 28.25 4.00e-94 338.00
IUUC-Ggo-044693 Gorilla gorilla 31.09 7.00e-111 393.00
IUUC-Hsa-046048 Homo sapiens 31.09 2.00e-110 392.00
IUUC-Hvu-047608 Hordeum vulgare 27.54 1.00e-92 333.00
IUUC-Itr-048391 Ictidomys tridecemlineatus 31.34 7.00e-116 410.00
IUUC-Kpa-049209 Komagataella pastoris 28.43 2.00e-89 322.00
IUUC-Lch-050085 Latimeria chalumnae 30.51 2.00e-108 385.00
IUUC-Lpe-050945 Leersia perrieri 27.90 1.00e-84 306.00
IUUC-Loc-052679 Lepisosteus oculatus 31.03 1.00e-120 426.00
IUUC-Laf-053685 Loxodonta africana 29.71 8.00e-103 366.00
IUUC-Mcc-055861 Macaca mulatta 30.85 2.00e-111 395.00
IUUC-Meu-056820 Macropus eugenii 40.16 2.00e-44 172.00
IUUC-Mor-057234 Magnaporthe oryzae 24.34 1.00e-65 243.00
IUUC-Mpo-057456 Magnaporthe poae 25.36 1.00e-51 196.00
IUUC-Mtr-058122 Medicago truncatula 27.68 1.00e-91 330.00
IUUC-Mla-058980 Melampsora laricipopulina 29.39 2.00e-75 276.00
IUUC-Mga-060080 Meleagris gallopavo 31.78 4.00e-113 400.00
IUUC-Mvi-060338 Microbotryum violaceum 29.84 3.00e-96 345.00
IUUC-Mmr-060762 Microcebus murinus 30.84 8.00e-111 393.00
IUUC-Mdo-061975 Monodelphis domestica 31.93 1.00e-112 399.00
IUUC-Mmu-064038 Mus musculus 31.51 1.00e-112 399.00
IUUC-Mac-065189 Musa acuminata 27.24 1.00e-87 317.00
IUUC-Mpu-066526 Mustela putorius furo 30.84 9.00e-113 399.00
IUUC-Mlu-067716 Myotis lucifugus 31.59 1.00e-121 429.00
IUUC-Nfi-068474 Neosartorya fischeri 25.34 2.00e-65 243.00
IUUC-Ncr-068826 Neurospora crassa 25.90 9.00e-76 277.00
IUUC-Nle-069832 Nomascus leucogenys 31.34 4.00e-115 407.00
IUUC-Opr-071183 Ochotona princeps 30.01 1.00e-108 386.00
IUUC-Ont-072371 Oreochromis niloticus 31.82 1.00e-119 422.00
IUUC-Oan-073491 Ornithorhynchus anatinus 29.04 2.00e-90 326.00
IUUC-Oba-075963 Oryza barthii 28.43 1.00e-90 326.00
IUUC-Obr-076173 Oryza brachyantha 28.69 1.00e-91 330.00
IUUC-Ogl-077692 Oryza glaberrima 28.43 1.00e-90 326.00
IUUC-Ogu-078965 Oryza glumaepatula 28.43 9.00e-91 327.00
IUUC-Oin-079708 Oryza indica 28.30 4.00e-90 325.00
IUUC-Olo-080679 Oryza longistaminata 28.30 2.00e-89 322.00
IUUC-Oni-082960 Oryza nivara 28.30 2.00e-90 325.00
IUUC-Opu-083282 Oryza punctata 28.54 5.00e-87 314.00
IUUC-Oru-085224 Oryza rufipogon 28.43 8.00e-91 327.00
IUUC-Osa-085320 Oryza sativa 28.43 8.00e-91 327.00
IUUC-Ola-086370 Oryzias latipes 39.48 3.00e-45 175.00
IUUC-Olu-087814 Ostreococcus lucimarinus 25.03 6.00e-62 231.00
IUUC-Oga-088458 Otolemur garnettii 30.46 8.00e-118 416.00
IUUC-Oar-090032 Ovis aries 31.07 1.00e-74 272.00
IUUC-Ptr-090749 Pan troglodytes 30.88 5.00e-110 390.00
IUUC-Pan-091691 Papio anubis 30.35 4.00e-101 361.00
IUUC-Psi-093200 Pelodiscus sinensis 31.70 2.00e-115 409.00
IUUC-Pma-094165 Petromyzon marinus 30.25 6.00e-82 297.00
IUUC-Pno-095048 Phaeosphaeria nodorum 27.65 5.00e-68 251.00
IUUC-Ppa-095336 Physcomitrella patens 29.21 5.00e-96 344.00
IUUC-Pfo-096132 Poecilia formosa 32.35 6.00e-116 410.00
IUUC-Pab-097855 Pongo abelii 30.97 6.00e-114 403.00
IUUC-Pop-099434 Populus trichocarpa 26.17 4.00e-72 265.00
IUUC-Pca-100232 Procavia capensis 38.43 2.00e-38 153.00
IUUC-Ppe-101665 Prunus persica 26.76 6.00e-84 304.00
IUUC-Pva-102178 Pteropus vampyrus 31.80 1.00e-113 403.00
IUUC-Pgr-103288 Puccinia graminis 29.60 4.00e-74 271.00
IUUC-Ptt-103808 Puccinia triticina 29.55 5.00e-72 264.00
IUUC-Pte-104205 Pyrenophora teres 26.65 4.00e-77 281.00
IUUC-Pyt-104658 Pyrenophora triticirepentis 26.46 7.00e-72 264.00
IUUC-Rno-105617 Rattus norvegicus 32.33 2.00e-116 411.00
IUUC-Sce-106281 Saccharomyces cerevisiae 25.93 3.00e-77 281.00
IUUC-Sha-107378 Sarcophilus harrisii 31.34 1.00e-112 399.00
IUUC-Sja-107718 Schizosaccharomyces japonicus 28.85 2.00e-91 328.00
IUUC-Spo-108361 Schizosaccharomyces pombe 28.95 1.00e-90 326.00
IUUC-Ssl-108592 Sclerotinia sclerotiorum 27.78 1.00e-81 296.00
IUUC-Smo-109257 Selaginella moellendorffii 29.44 2.00e-100 358.00
IUUC-Sit-110258 Setaria italica 27.46 5.00e-92 331.00
IUUC-Sly-111521 Solanum lycopersicum 27.26 1.00e-89 323.00
IUUC-Sar-113586 Sorex araneus 38.06 4.00e-17 81.60
IUUC-Sbi-114768 Sorghum bicolor 28.00 6.00e-92 330.00
IUUC-Sre-115159 Sporisorium reilianum 28.44 3.00e-59 222.00
IUUC-Ssc-116342 Sus scrofa 25.52 7.00e-60 224.00
IUUC-Tgu-117320 Taeniopygia guttata 31.26 6.00e-110 390.00
IUUC-Tru-118024 Takifugu rubripes 32.07 6.00e-121 427.00
IUUC-Tni-119971 Tetraodon nigroviridis 31.93 8.00e-116 410.00
IUUC-Tca-121248 Theobroma cacao 27.26 4.00e-88 318.00
IUUC-Tre-122079 Trichoderma reesei 26.70 5.00e-74 271.00
IUUC-Tvi-122554 Trichoderma virens 25.49 3.00e-70 258.00
IUUC-Tae-124473 Triticum aestivum 28.05 1.00e-93 337.00
IUUC-Tur-126436 Triticum urartu 26.42 1.00e-69 256.00
IUUC-Tme-126942 Tuber melanosporum 27.56 4.00e-74 271.00
IUUC-Tbe-128000 Tupaia belangeri 43.41 4.00e-24 105.00
IUUC-Ttr-128964 Tursiops truncatus 31.00 8.00e-113 400.00
IUUC-Uma-129473 Ustilago maydis 26.00 2.00e-62 233.00
IUUC-Vda-129749 Verticillium dahliae 26.84 2.00e-70 259.00
IUUC-Vvi-131511 Vitis vinifera 27.19 2.00e-84 305.00
IUUC-Xtr-132816 Xenopus tropicalis 30.92 2.00e-102 365.00
IUUC-Xma-133672 Xiphophorus maculatus 31.99 4.00e-119 421.00
IUUC-Yli-134602 Yarrowia lipolytica 30.86 1.00e-98 353.00
IUUC-Zma-135559 Zea mays 27.79 3.00e-87 315.00
Created Date 25-Jun-2017

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