iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036891

Ensembl Protein ID

ENSFALP00000004198.1

UniProt Accession

U3JN44; U3JN44_FICAL

Genbank Protein ID

ENSFALP00000004198

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000452

Gene Name

WDR12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000004032.1	ENSFALT00000004219.1	ENSFALP00000004198.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-44	147.9	272	307
UBD/Beta-Prp	5.60e-46	156.7	177	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrtgv 34
           Ht++vt++++ ++  + l+sGs D+ +k+WD+r+++
   Q: 272  HTGWVTSVKWsPTheHQLISGSLDNIVKLWDTRSCK 307
           **********9444577**************99876 PP

UBD/Beta-Prp

   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           t++++ tl+gh++ + s+ +s   + + s+s+d ti++wd etg   + tl+g++ v n+v+++p ++ l+sGs+Dr +rlWd ++++ 
   Q: 177  TRTPLATLSGHTEAISSVLWSD-AEEICSASWDHTIKLWDAETGDLKS-TLTGNK-VFNSVSYSPLCRRLASGSTDRHIRLWDPRSKDG 262
           677899***************9.99**********************9.***987.99**************************66654 PP
   S: 172  lrtl...tgghtdsvyslsfdsng.kelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
              l   t+ ht+ v+s++++++   +l+sgsld+ vklwd +  +  ++ l +h+d v++v+ + +  +l+sg++D+ ++++
   Q: 263  SLVLlslTS-HTGWVTSVKWSPTHeHQLISGSLDNIVKLWDTRsCKAPLYDLAAHEDKVLCVDWT-EAGLLLSGGADNKLYCY 343
           333334387.************99788****************54566****************9.999**********9997 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MEMENISTEE VVEIEYVEKY MAPQPEECIF HDDWISSVQA TEEWILTGCY DQTARIWSVE 60
GKSIMTIAGH TEVVKDVAWV KQDSLSCLLL SASMDQTVLL WEWNVEKNKV KALHCCRGHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCAGA 60
AAGGCGCCCG AGGCCACGGG CCAGGCTGCC ACGCGTGCAG TGGAAGTGTT GCCCAAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0008283--P:cell proliferation
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0007219--P:Notch signaling pathway

KEGG

fab:101811918

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000532	Aegilops tauschii	33.13	3.00e-48	185.00
IUUC-Aml-001997	Ailuropoda melanoleuca	86.72	5.00e-160	556.00
IUUC-Atr-002544	Amborella trichopoda	33.13	2.00e-44	173.00
IUUC-Apl-003981	Anas platyrhynchos	97.46	0.00e+00	641.00
IUUC-Aca-004370	Anolis carolinensis	87.64	8.00e-170	589.00
IUUC-Aly-006455	Arabidopsis lyrata	34.46	7.00e-47	181.00
IUUC-Ath-006669	Arabidopsis thaliana	34.46	2.00e-46	179.00
IUUC-Ago-007864	Ashbya gossypii	28.57	3.00e-26	112.00
IUUC-Acl-008177	Aspergillus clavatus	28.43	2.00e-26	113.00
IUUC-Afl-008617	Aspergillus flavus	29.17	6.00e-26	111.00
IUUC-Afu-008752	Aspergillus fumigatus	27.65	2.00e-23	103.00
IUUC-Ani-009136	Aspergillus nidulans	28.71	7.00e-26	111.00
IUUC-Ang-009701	Aspergillus niger	28.21	4.00e-24	105.00
IUUC-Aor-009884	Aspergillus oryzae	28.85	3.00e-25	109.00
IUUC-Ame-011432	Astyanax mexicanus	81.07	3.00e-160	557.00
IUUC-Bgr-012218	Blumeria graminis	27.06	8.00e-26	111.00
IUUC-Bta-012829	Bos taurus	86.44	2.00e-160	558.00
IUUC-Bci-013953	Botrytis cinerea	28.12	2.00e-27	116.00
IUUC-Bdi-014351	Brachypodium distachyon	35.31	9.00e-43	167.00
IUUC-Bol-016514	Brassica oleracea	35.24	2.00e-45	176.00
IUUC-Bra-016988	Brassica rapa	35.24	3.00e-45	176.00
IUUC-Cel-018569	Caenorhabditis elegans	33.94	8.00e-41	160.00
IUUC-Cja-019468	Callithrix jacchus	85.42	8.00e-155	539.00
IUUC-Cfa-020471	Canis familiaris	85.88	3.00e-158	551.00
IUUC-Cpo-022260	Cavia porcellus	86.01	3.00e-156	544.00
IUUC-Cre-022614	Chlamydomonas reinhardtii	30.12	2.00e-25	109.00
IUUC-Csa-023989	Chlorocebus sabaeus	85.71	5.00e-156	543.00
IUUC-Cho-024426	Choloepus hoffmanni	84.76	5.00e-140	490.00
IUUC-Cin-025789	Ciona intestinalis	45.22	2.00e-78	285.00
IUUC-Dre-027907	Danio rerio	81.64	2.00e-162	565.00
IUUC-Dno-029225	Dasypus novemcinctus	86.44	3.00e-159	554.00
IUUC-Dor-031082	Dipodomys ordii	67.80	1.00e-108	386.00
IUUC-Dse-031308	Dothistroma septosporum	29.02	2.00e-27	116.00
IUUC-Dme-032189	Drosophila melanogaster	42.94	1.00e-78	286.00
IUUC-Ete-032247	Echinops telfairi	79.38	6.00e-143	500.00
IUUC-Eca-034285	Equus caballus	86.16	5.00e-159	553.00
IUUC-Eeu-035322	Erinaceus europaeus	87.02	3.00e-131	461.00
IUUC-Fca-036114	Felis catus	85.88	8.00e-159	553.00
IUUC-Fox-037965	Fusarium oxysporum	25.93	5.00e-26	112.00
IUUC-Fso-038244	Fusarium solani	25.93	2.00e-25	110.00
IUUC-Gmo-039040	Gadus morhua	79.38	9.00e-160	556.00
IUUC-Gga-040610	Gallus gallus	98.59	0.00e+00	653.00
IUUC-Gac-042117	Gasterosteus aculeatus	77.97	4.00e-151	527.00
IUUC-Gma-043425	Glycine max	36.12	3.00e-48	185.00
IUUC-Ggo-045179	Gorilla gorilla	85.42	2.00e-155	541.00
IUUC-Hsa-046114	Homo sapiens	86.01	3.00e-156	544.00
IUUC-Hvu-047331	Hordeum vulgare	32.84	1.00e-45	176.00
IUUC-Itr-048275	Ictidomys tridecemlineatus	86.44	4.00e-160	557.00
IUUC-Kpa-049304	Komagataella pastoris	29.91	9.00e-34	137.00
IUUC-Lch-050655	Latimeria chalumnae	77.04	9.00e-108	382.00
IUUC-Lpe-051675	Leersia perrieri	34.83	1.00e-47	184.00
IUUC-Loc-052868	Lepisosteus oculatus	83.33	1.00e-160	558.00
IUUC-Lma-053258	Leptosphaeria maculans	28.99	1.00e-26	115.00
IUUC-Laf-053993	Loxodonta africana	86.16	2.00e-159	554.00
IUUC-Mcc-055128	Macaca mulatta	72.60	6.00e-124	436.00
IUUC-Meu-056501	Macropus eugenii	82.89	2.00e-133	468.00
IUUC-Mor-057114	Magnaporthe oryzae	25.91	1.00e-19	91.30
IUUC-Mtr-058367	Medicago truncatula	37.17	4.00e-46	178.00
IUUC-Mla-059107	Melampsora laricipopulina	25.82	6.00e-18	85.10
IUUC-Mga-059745	Meleagris gallopavo	97.19	0.00e+00	644.00
IUUC-Mvi-060362	Microbotryum violaceum	35.38	1.00e-22	100.00
IUUC-Mdo-062257	Monodelphis domestica	83.19	2.00e-162	565.00
IUUC-Mmu-063546	Mus musculus	86.16	5.00e-159	553.00
IUUC-Mac-065540	Musa acuminata	31.45	1.00e-42	166.00
IUUC-Mpu-066284	Mustela putorius furo	86.16	1.00e-159	555.00
IUUC-Mlu-067241	Myotis lucifugus	85.59	1.00e-158	552.00
IUUC-Nfi-068260	Neosartorya fischeri	28.53	2.00e-24	107.00
IUUC-Ncr-068719	Neurospora crassa	25.91	6.00e-18	85.10
IUUC-Nle-068981	Nomascus leucogenys	85.42	5.00e-155	540.00
IUUC-Opr-071218	Ochotona princeps	77.51	3.00e-138	484.00
IUUC-Ont-071646	Oreochromis niloticus	78.63	8.00e-156	543.00
IUUC-Oan-073453	Ornithorhynchus anatinus	87.85	8.00e-173	599.00
IUUC-Ocu-074008	Oryctolagus cuniculus	85.88	3.00e-159	554.00
IUUC-Oba-075712	Oryza barthii	28.40	1.00e-30	127.00
IUUC-Obr-076721	Oryza brachyantha	33.73	1.00e-46	180.00
IUUC-Ogl-077229	Oryza glaberrima	34.13	4.00e-47	181.00
IUUC-Ogu-078977	Oryza glumaepatula	28.40	5.00e-31	128.00
IUUC-Oin-079683	Oryza indica	34.13	2.00e-47	182.00
IUUC-Ome-081834	Oryza meridionalis	34.73	2.00e-48	186.00
IUUC-Oni-082507	Oryza nivara	31.93	2.00e-41	163.00
IUUC-Opu-083396	Oryza punctata	34.43	7.00e-48	184.00
IUUC-Oru-085220	Oryza rufipogon	32.13	2.00e-41	163.00
IUUC-Osa-085767	Oryza sativa	34.13	2.00e-47	182.00
IUUC-Ola-087420	Oryzias latipes	78.53	7.00e-156	543.00
IUUC-Olu-087740	Ostreococcus lucimarinus	28.78	4.00e-30	125.00
IUUC-Oga-088264	Otolemur garnettii	85.59	1.00e-159	555.00
IUUC-Oar-089335	Ovis aries	85.59	4.00e-159	553.00
IUUC-Ptr-091320	Pan troglodytes	86.01	3.00e-156	544.00
IUUC-Pan-092833	Papio anubis	86.01	2.00e-155	541.00
IUUC-Psi-093504	Pelodiscus sinensis	90.68	2.00e-175	607.00
IUUC-Pma-094189	Petromyzon marinus	69.58	1.00e-137	482.00
IUUC-Pno-094929	Phaeosphaeria nodorum	26.98	5.00e-28	118.00
IUUC-Ppa-095429	Physcomitrella patens	34.23	2.00e-50	192.00
IUUC-Pfo-096337	Poecilia formosa	77.12	7.00e-157	546.00
IUUC-Pab-097571	Pongo abelii	86.01	4.00e-156	543.00
IUUC-Pop-099977	Populus trichocarpa	35.38	1.00e-49	190.00
IUUC-Pca-100394	Procavia capensis	80.51	5.00e-146	510.00
IUUC-Ppe-101848	Prunus persica	37.23	1.00e-50	193.00
IUUC-Pva-102921	Pteropus vampyrus	84.27	1.00e-65	243.00
IUUC-Pgr-103637	Puccinia graminis	28.29	9.00e-24	104.00
IUUC-Ptt-103781	Puccinia triticina	27.34	4.00e-23	102.00
IUUC-Pte-104135	Pyrenophora teres	28.17	6.00e-30	126.00
IUUC-Pyt-104609	Pyrenophora triticirepentis	27.89	5.00e-28	118.00
IUUC-Rno-105114	Rattus norvegicus	83.33	4.00e-157	546.00
IUUC-Sce-106401	Saccharomyces cerevisiae	28.30	3.00e-27	115.00
IUUC-Sha-107122	Sarcophilus harrisii	84.50	1.00e-154	539.00
IUUC-Sja-107766	Schizosaccharomyces japonicus	29.97	2.00e-33	136.00
IUUC-Spo-108134	Schizosaccharomyces pombe	28.70	2.00e-26	112.00
IUUC-Smo-108720	Selaginella moellendorffii	33.64	3.00e-43	169.00
IUUC-Sit-110311	Setaria italica	34.12	5.00e-47	181.00
IUUC-Sly-111023	Solanum lycopersicum	32.43	3.00e-44	172.00
IUUC-Stu-112778	Solanum tuberosum	35.63	2.00e-49	189.00
IUUC-Sar-113596	Sorex araneus	76.19	4.00e-137	481.00
IUUC-Sbi-114193	Sorghum bicolor	34.33	9.00e-47	180.00
IUUC-Ssc-116066	Sus scrofa	85.88	1.00e-158	552.00
IUUC-Tgu-117048	Taeniopygia guttata	99.15	0.00e+00	651.00
IUUC-Tsy-119573	Tarsius syrichta	57.67	1.00e-82	300.00
IUUC-Tni-119820	Tetraodon nigroviridis	78.53	4.00e-155	540.00
IUUC-Tca-121605	Theobroma cacao	35.35	2.00e-47	183.00
IUUC-Tre-121947	Trichoderma reesei	26.72	1.00e-26	114.00
IUUC-Tvi-122481	Trichoderma virens	27.25	5.00e-28	118.00
IUUC-Tae-123847	Triticum aestivum	33.13	3.00e-48	185.00
IUUC-Tur-126586	Triticum urartu	32.84	1.00e-47	183.00
IUUC-Tme-126900	Tuber melanosporum	30.41	8.00e-34	137.00
IUUC-Tbe-127736	Tupaia belangeri	60.79	6.00e-93	333.00
IUUC-Ttr-129041	Tursiops truncatus	73.45	2.00e-133	468.00
IUUC-Vpa-130260	Vicugna pacos	86.16	2.00e-159	554.00
IUUC-Vvi-131009	Vitis vinifera	35.52	5.00e-48	184.00
IUUC-Xtr-132083	Xenopus tropicalis	80.23	4.00e-157	547.00
IUUC-Xma-133094	Xiphophorus maculatus	76.55	1.00e-155	542.00
IUUC-Yli-134531	Yarrowia lipolytica	26.21	2.00e-17	83.60
IUUC-Zma-135509	Zea mays	33.43	1.00e-44	173.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence