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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018335
UUCD1 version UUC-CaE-00399
Ensembl Protein ID K04D7.1.1
UniProt Accession Q21215; GBLP_CAEEL
Genbank Protein ID CAA93514.1
Protein Name Guanine nucleotide-binding protein subunit beta-2-like 1
Genbank Nucleotide ID Z69664
Gene Name rack-1; K04D7.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00010556 K04D7.1.1 K04D7.1.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA
Protein-protein Interaction
IIDiRefIndexPINAMentha
Post-translational Modifications (PTMs)
dbPAFdbPTMPhospho.ELMPHOSIDA
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.00e-41 138.4 14 49
UBD/Beta-Prp 1.90e-54 185.1 7 186
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtcla.f..sd.tllvsGsdDgtikvWDlrt 32
           gHt++vt +a +  +d t+++s+s+D+ti vWD+++
   Q: 14   GHTGWVTQIAtYtrNDkTTVLSSSRDKTILVWDVDS 49
           8********967**999****************965 PP
   

   UBD/Beta-Prp
   S: 85   kcvhtlkghedsvlslsfsp..sgdklvsGshdrtirvwdletgqclee........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           k + tl+gh+  v+ ++ +   ++ +++s s+d+ti vwd+++   + e         l+gh+++v+ vv+++dg+   sGs D+t+rlWdl++g   r+
   Q: 7    KLTGTLEGHTGWVTQIATYTrnDKTTVLSSSRDKTILVWDVDSVAPVDEgpigrpvrSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQ 106
           6677899999999999988874558899999999999999999999999999999999999999999999999999999999999999999999999999 PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng..htdnvksvrfs..pnderlvsgssDgsiriWdlr 252
           + + ht++v s++f+ + +++vsgs+d+++klw+  ++ c +t ++  htd+v+ vrfs  ++d  +vs++ D+++++W+l 
   Q: 107  FIS-HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQ-CKYTITDdcHTDWVSTVRFSpsNRDPVIVSAGWDKVVKVWNLG 186
           998.9999999999999999999999999999998644.6665553339999999999977788899999999999999754 PP
   
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description


     Required for the expression of antimicrobial peptide nlp-29 in response to fungal infection or physical injury.
 Required for the expression of antimicrobial peptide nlp-29 in response to fungal infection or physical injury.
Protein Sequence
(Fasta)
MVQEQMKLTG TLEGHTGWVT QIATYTRNDK TTVLSSSRDK TILVWDVDSV APVDEGPIGR 60
PVRSLTGHNH FVSDVVISSD GQFALSGSWD KTLRLWDLNQ GVSTRQFISH TKDVLSVAFS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018335|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAGATCGAAC GGGGTTACAC AGATAGCAAA ATGGTCCAAG AGCAAATGAA GCTTACCGGA 60
ACCCTCGAGG GTCACACCGG ATGGGTTACC CAAATCGCCA CCTACACCCG CAACGACAAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018335|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0903--Direct protein sequencing
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0030424--C:axon
GO:0044297--C:cell body
GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0030426--C:growth cone
GO:0000776--C:kinetochore
GO:0005635--C:nuclear envelope
GO:0051304--P:chromosome separation
GO:0050832--P:defense response to fungus
GO:0009792--P:embryo development ending in birth or egg hatching
GO:0000281--P:mitotic cytokinesis
GO:0008045--P:motor neuron axon guidance
GO:0040038--P:polar body extrusion after meiotic divisions
GO:0033365--P:protein localization to organelle
GO:0030334--P:regulation of cell migration
KEGG cel:CELE_K04D7.1
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000395 Aegilops tauschii 59.79 4.00e-95 339.00
IUUC-Aml-001935 Ailuropoda melanoleuca 72.19 2.00e-133 467.00
IUUC-Atr-002694 Amborella trichopoda 59.87 2.00e-108 384.00
IUUC-Apl-003918 Anas platyrhynchos 73.85 3.00e-122 429.00
IUUC-Aca-004869 Anolis carolinensis 72.19 2.00e-133 467.00
IUUC-Aly-005806 Arabidopsis lyrata 59.88 1.00e-107 381.00
IUUC-Ath-007584 Arabidopsis thaliana 59.57 1.00e-107 381.00
IUUC-Ago-007720 Ashbya gossypii 52.66 4.00e-90 323.00
IUUC-Acl-008156 Aspergillus clavatus 65.84 1.00e-122 431.00
IUUC-Afl-008684 Aspergillus flavus 65.53 8.00e-123 431.00
IUUC-Afu-008867 Aspergillus fumigatus 66.77 4.00e-124 436.00
IUUC-Ani-009221 Aspergillus nidulans 65.53 5.00e-123 432.00
IUUC-Ang-009843 Aspergillus niger 64.91 2.00e-121 427.00
IUUC-Aor-010193 Aspergillus oryzae 65.53 8.00e-123 431.00
IUUC-Ate-010420 Aspergillus terreus 66.32 2.00e-113 400.00
IUUC-Ame-011199 Astyanax mexicanus 71.88 2.00e-133 466.00
IUUC-Bgr-012064 Blumeria graminis 63.66 2.00e-120 423.00
IUUC-Bta-013357 Bos taurus 72.19 2.00e-133 467.00
IUUC-Bci-013862 Botrytis cinerea 64.60 4.00e-122 429.00
IUUC-Bdi-014690 Brachypodium distachyon 58.79 1.00e-106 378.00
IUUC-Bol-016005 Brassica oleracea 59.39 8.00e-109 385.00
IUUC-Bra-016871 Brassica rapa 59.27 6.00e-109 385.00
IUUC-Cja-019914 Callithrix jacchus 72.19 2.00e-133 467.00
IUUC-Cfa-020755 Canis familiaris 72.19 2.00e-133 467.00
IUUC-Cpo-022377 Cavia porcellus 72.19 1.00e-133 468.00
IUUC-Cre-022909 Chlamydomonas reinhardtii 64.26 1.00e-117 414.00
IUUC-Csa-023025 Chlorocebus sabaeus 72.19 3.00e-133 466.00
IUUC-Cin-025647 Ciona intestinalis 68.00 7.00e-127 445.00
IUUC-Csv-026027 Ciona savignyi 67.38 1.00e-126 444.00
IUUC-Cgl-026718 Colletotrichum gloeosporioides 67.01 4.00e-116 409.00
IUUC-Cne-026930 Cryptococcus neoformans 62.89 2.00e-117 413.00
IUUC-Cme-027251 Cyanidioschyzon merolae 58.49 2.00e-108 383.00
IUUC-Dre-028669 Danio rerio 72.50 1.00e-133 468.00
IUUC-Dno-029470 Dasypus novemcinctus 60.92 2.00e-106 377.00
IUUC-Dor-031098 Dipodomys ordii 65.11 2.00e-104 370.00
IUUC-Dse-031255 Dothistroma septosporum 63.98 2.00e-120 424.00
IUUC-Dme-032118 Drosophila melanogaster 67.08 3.00e-126 443.00
IUUC-Ete-033182 Echinops telfairi 65.77 2.00e-84 304.00
IUUC-Eca-033296 Equus caballus 77.03 6.00e-69 251.00
IUUC-Eeu-034771 Erinaceus europaeus 68.44 1.00e-123 434.00
IUUC-Fca-036315 Felis catus 72.19 2.00e-133 467.00
IUUC-Fal-036990 Ficedula albicollis 74.03 9.00e-77 278.00
IUUC-Fox-037702 Fusarium oxysporum 65.53 3.00e-124 436.00
IUUC-Fso-038384 Fusarium solani 65.22 3.00e-123 433.00
IUUC-Gmo-039630 Gadus morhua 71.02 1.00e-129 454.00
IUUC-Ggr-039985 Gaeumannomyces graminis 66.46 2.00e-125 440.00
IUUC-Gga-040540 Gallus gallus 72.19 2.00e-133 467.00
IUUC-Gac-041316 Gasterosteus aculeatus 69.81 1.00e-129 454.00
IUUC-Gma-042872 Glycine max 58.10 2.00e-106 377.00
IUUC-Ggo-045253 Gorilla gorilla 72.19 2.00e-133 467.00
IUUC-Hsa-046809 Homo sapiens 72.19 2.00e-133 467.00
IUUC-Hvu-047683 Hordeum vulgare 58.54 8.00e-107 378.00
IUUC-Itr-048025 Ictidomys tridecemlineatus 72.19 2.00e-133 467.00
IUUC-Kpa-049214 Komagataella pastoris 51.55 1.00e-85 308.00
IUUC-Lch-049634 Latimeria chalumnae 71.56 5.00e-132 462.00
IUUC-Lpe-050762 Leersia perrieri 59.57 6.00e-106 375.00
IUUC-Loc-052163 Lepisosteus oculatus 72.50 5.00e-133 465.00
IUUC-Lma-053113 Leptosphaeria maculans 65.53 1.00e-123 434.00
IUUC-Laf-054422 Loxodonta africana 72.19 2.00e-133 467.00
IUUC-Mcc-055348 Macaca mulatta 72.19 3.00e-133 466.00
IUUC-Meu-056543 Macropus eugenii 71.96 1.00e-133 467.00
IUUC-Mor-057107 Magnaporthe oryzae 66.46 1.00e-125 441.00
IUUC-Mpo-057487 Magnaporthe poae 66.15 6.00e-125 438.00
IUUC-Mtr-058808 Medicago truncatula 59.02 4.00e-108 382.00
IUUC-Mla-058909 Melampsora laricipopulina 66.04 3.00e-125 439.00
IUUC-Mga-059387 Meleagris gallopavo 72.19 2.00e-133 467.00
IUUC-Mvi-060392 Microbotryum violaceum 63.52 7.00e-118 415.00
IUUC-Mmr-061141 Microcebus murinus 65.86 3.00e-100 356.00
IUUC-Mdo-062932 Monodelphis domestica 72.19 2.00e-133 467.00
IUUC-Mmu-064132 Mus musculus 72.19 2.00e-133 467.00
IUUC-Mac-064447 Musa acuminata 55.21 7.00e-95 338.00
IUUC-Mpu-066721 Mustela putorius furo 71.56 1.00e-130 457.00
IUUC-Mlu-068221 Myotis lucifugus 70.31 4.00e-124 436.00
IUUC-Nfi-068344 Neosartorya fischeri 66.77 5.00e-124 436.00
IUUC-Ncr-068722 Neurospora crassa 64.60 3.00e-122 430.00
IUUC-Nle-069865 Nomascus leucogenys 72.19 2.00e-133 467.00
IUUC-Opr-071100 Ochotona princeps 59.06 2.00e-99 354.00
IUUC-Ont-072287 Oreochromis niloticus 72.19 4.00e-133 466.00
IUUC-Oan-072788 Ornithorhynchus anatinus 72.19 2.00e-133 467.00
IUUC-Ocu-073844 Oryctolagus cuniculus 70.31 2.00e-127 447.00
IUUC-Oba-075981 Oryza barthii 56.31 2.00e-94 337.00
IUUC-Obr-076099 Oryza brachyantha 58.79 2.00e-105 373.00
IUUC-Ogl-077181 Oryza glaberrima 60.06 6.00e-107 379.00
IUUC-Ogu-078035 Oryza glumaepatula 60.06 6.00e-107 379.00
IUUC-Oin-079327 Oryza indica 60.06 6.00e-107 379.00
IUUC-Olo-081084 Oryza longistaminata 60.06 6.00e-107 379.00
IUUC-Ome-081612 Oryza meridionalis 60.06 6.00e-107 379.00
IUUC-Oni-082682 Oryza nivara 58.48 9.00e-104 368.00
IUUC-Opu-083308 Oryza punctata 59.45 8.00e-106 375.00
IUUC-Oru-084200 Oryza rufipogon 60.06 6.00e-107 379.00
IUUC-Osa-085488 Oryza sativa 60.06 6.00e-107 379.00
IUUC-Ola-086400 Oryzias latipes 72.50 1.00e-133 467.00
IUUC-Olu-087817 Ostreococcus lucimarinus 65.19 5.00e-119 419.00
IUUC-Oga-088811 Otolemur garnettii 72.19 2.00e-133 467.00
IUUC-Oar-089962 Ovis aries 72.19 2.00e-133 467.00
IUUC-Ptr-091340 Pan troglodytes 72.19 2.00e-133 467.00
IUUC-Pan-091946 Papio anubis 72.19 3.00e-133 466.00
IUUC-Pma-094535 Petromyzon marinus 73.75 3.00e-134 469.00
IUUC-Pno-095100 Phaeosphaeria nodorum 67.74 3.00e-84 303.00
IUUC-Ppa-095752 Physcomitrella patens 66.77 3.00e-119 419.00
IUUC-Pfo-097311 Poecilia formosa 71.88 1.00e-132 464.00
IUUC-Pab-097863 Pongo abelii 72.19 2.00e-133 467.00
IUUC-Pop-099345 Populus trichocarpa 60.00 5.00e-109 385.00
IUUC-Pca-100594 Procavia capensis 71.88 2.00e-132 464.00
IUUC-Ppe-101743 Prunus persica 58.05 1.00e-105 375.00
IUUC-Pva-102746 Pteropus vampyrus 59.69 6.00e-102 362.00
IUUC-Pgr-103375 Puccinia graminis 50.31 6.00e-84 302.00
IUUC-Ptt-103839 Puccinia triticina 66.35 2.00e-125 440.00
IUUC-Pte-104026 Pyrenophora teres 65.53 1.00e-123 434.00
IUUC-Pyt-104584 Pyrenophora triticirepentis 65.53 1.00e-123 434.00
IUUC-Rno-104964 Rattus norvegicus 72.19 2.00e-133 467.00
IUUC-Sce-106224 Saccharomyces cerevisiae 49.06 1.00e-84 305.00
IUUC-Sha-107409 Sarcophilus harrisii 72.19 2.00e-133 467.00
IUUC-Sja-107971 Schizosaccharomyces japonicus 60.50 5.00e-111 392.00
IUUC-Spo-108297 Schizosaccharomyces pombe 58.62 6.00e-107 379.00
IUUC-Ssl-108479 Sclerotinia sclerotiorum 64.60 4.00e-122 429.00
IUUC-Smo-109017 Selaginella moellendorffii 65.59 9.00e-115 405.00
IUUC-Sit-110680 Setaria italica 58.48 2.00e-105 374.00
IUUC-Sly-111839 Solanum lycopersicum 59.04 6.00e-109 385.00
IUUC-Stu-112775 Solanum tuberosum 59.57 6.00e-109 385.00
IUUC-Sar-113173 Sorex araneus 72.19 2.00e-133 467.00
IUUC-Sbi-114681 Sorghum bicolor 58.36 6.00e-106 375.00
IUUC-Sre-115107 Sporisorium reilianum 65.52 1.00e-124 437.00
IUUC-Ssc-116218 Sus scrofa 70.31 2.00e-131 460.00
IUUC-Tru-118202 Takifugu rubripes 71.56 1.00e-131 461.00
IUUC-Tni-120260 Tetraodon nigroviridis 70.62 7.00e-130 455.00
IUUC-Tca-120951 Theobroma cacao 59.33 2.00e-108 383.00
IUUC-Tre-121961 Trichoderma reesei 66.15 2.00e-124 437.00
IUUC-Tvi-122447 Trichoderma virens 65.84 2.00e-123 434.00
IUUC-Tae-123560 Triticum aestivum 58.23 2.00e-106 377.00
IUUC-Tur-126335 Triticum urartu 62.88 6.00e-96 342.00
IUUC-Tme-127105 Tuber melanosporum 60.69 1.00e-109 387.00
IUUC-Tbe-128021 Tupaia belangeri 63.00 2.00e-64 236.00
IUUC-Ttr-128637 Tursiops truncatus 61.37 7.00e-107 379.00
IUUC-Uma-129634 Ustilago maydis 65.41 1.00e-123 434.00
IUUC-Vda-129923 Verticillium dahliae 64.60 3.00e-123 433.00
IUUC-Vpa-130410 Vicugna pacos 80.00 1.00e-80 291.00
IUUC-Vvi-131115 Vitis vinifera 58.36 9.00e-108 381.00
IUUC-Xtr-132105 Xenopus tropicalis 72.50 3.00e-133 466.00
IUUC-Xma-133875 Xiphophorus maculatus 71.88 1.00e-132 464.00
IUUC-Yli-134624 Yarrowia lipolytica 57.76 4.00e-106 376.00
IUUC-Zma-134711 Zea mays 58.61 2.00e-105 374.00
Created Date 25-Jun-2017

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