iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129666

Ensembl Protein ID

EGY20482

UniProt Accession

G2XIR3; G2XIR3_VERDV

Genbank Protein ID

EGY20482.1

Protein Name

Transport protein SEC13

Genbank Nucleotide ID

DS572725

Gene Name

VDAG_10111

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_10111	EGY20482	EGY20482

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-30	101.5	195	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvW 28
           gHtd+v+++a+     +  +++s+s D+t+++W
   Q: 195  GHTDWVRDVAWsptvlQKSYIASASQDKTVRIW 227
           8***********87753368************* PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MIHDAVLDYY GRRLATCSSD RTIKIFELEG ETQRLIETLK GHEGAVWCVA WAHPKYGNIL 60
ASAGYDGKVL VWREQAGWQK IFDFALHKAS VNIVSWSPHE SGCLLACASS DGNVSVLEFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTGTAA GTTGACGTCG TGGTTCAACT CCTGTGAGAG GTTTGGAGGG TGGATGTACG 60
GCCTAGTTTA CTTGAACTAA TCCGGGCTTC AACTTCCAGC ATGATGCTGT TCTCGACTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030127--C:COPII vesicle coat
GO:0000139--C:Golgi membrane
GO:0031080--C:nuclear pore outer ring
GO:0035859--C:Seh1-associated complex
GO:0005198--F:structural molecule activity
GO:0090114--P:COPII-coated vesicle budding
GO:0031081--P:nuclear pore distribution
GO:0043547--P:positive regulation of GTPase activity
GO:1904263--P:positive regulation of TORC1 signaling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

vda:VDAG_10111

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	50.85	3.00e-80	289.00
IUUC-Aml-001832	Ailuropoda melanoleuca	51.54	5.00e-83	299.00
IUUC-Atr-002914	Amborella trichopoda	53.74	1.00e-81	294.00
IUUC-Apl-003992	Anas platyrhynchos	51.89	9.00e-83	298.00
IUUC-Aca-005283	Anolis carolinensis	50.85	1.00e-82	297.00
IUUC-Aly-005654	Arabidopsis lyrata	53.38	3.00e-75	273.00
IUUC-Ath-006816	Arabidopsis thaliana	54.05	5.00e-76	275.00
IUUC-Ago-007827	Ashbya gossypii	55.97	1.00e-91	327.00
IUUC-Acl-008205	Aspergillus clavatus	71.48	6.00e-128	447.00
IUUC-Afl-008748	Aspergillus flavus	70.81	1.00e-127	447.00
IUUC-Afu-008791	Aspergillus fumigatus	71.14	3.00e-127	446.00
IUUC-Ani-009152	Aspergillus nidulans	68.79	2.00e-124	436.00
IUUC-Ang-009765	Aspergillus niger	71.81	4.00e-128	448.00
IUUC-Aor-009927	Aspergillus oryzae	70.37	2.00e-126	442.00
IUUC-Ate-010248	Aspergillus terreus	70.13	7.00e-127	444.00
IUUC-Ame-011478	Astyanax mexicanus	51.19	8.00e-84	301.00
IUUC-Bgr-012276	Blumeria graminis	75.00	8.00e-130	454.00
IUUC-Bta-012700	Bos taurus	50.33	2.00e-82	297.00
IUUC-Bci-013722	Botrytis cinerea	76.21	1.00e-131	460.00
IUUC-Bdi-014818	Brachypodium distachyon	51.19	3.00e-80	290.00
IUUC-Bol-015779	Brassica oleracea	53.38	4.00e-75	272.00
IUUC-Bra-017934	Brassica rapa	53.04	2.00e-74	270.00
IUUC-Cel-018479	Caenorhabditis elegans	41.61	3.00e-57	213.00
IUUC-Cja-019956	Callithrix jacchus	52.54	5.00e-77	279.00
IUUC-Cfa-020752	Canis familiaris	51.54	5.00e-83	299.00
IUUC-Cpo-021871	Cavia porcellus	51.88	9.00e-84	301.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	49.83	2.00e-74	270.00
IUUC-Csa-023393	Chlorocebus sabaeus	52.56	5.00e-84	302.00
IUUC-Cho-024660	Choloepus hoffmanni	31.99	6.00e-24	103.00
IUUC-Cin-025332	Ciona intestinalis	53.40	4.00e-85	305.00
IUUC-Csv-025926	Ciona savignyi	55.14	1.00e-86	311.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	86.16	8.00e-140	487.00
IUUC-Cne-027054	Cryptococcus neoformans	49.52	1.00e-74	271.00
IUUC-Cme-027165	Cyanidioschyzon merolae	37.90	2.00e-51	195.00
IUUC-Dre-027782	Danio rerio	51.54	3.00e-83	299.00
IUUC-Dno-029628	Dasypus novemcinctus	51.19	7.00e-83	298.00
IUUC-Dor-030650	Dipodomys ordii	50.89	3.00e-60	223.00
IUUC-Dse-031206	Dothistroma septosporum	67.01	1.00e-114	404.00
IUUC-Dme-031854	Drosophila melanogaster	49.31	2.00e-73	267.00
IUUC-Ete-032618	Echinops telfairi	40.61	1.00e-36	145.00
IUUC-Eca-033268	Equus caballus	51.88	4.00e-83	299.00
IUUC-Fca-035918	Felis catus	51.54	5.00e-83	298.00
IUUC-Fal-037551	Ficedula albicollis	51.88	2.00e-80	290.00
IUUC-Fox-037763	Fusarium oxysporum	81.51	4.00e-144	501.00
IUUC-Fso-038341	Fusarium solani	81.85	2.00e-144	503.00
IUUC-Gmo-038638	Gadus morhua	51.88	2.00e-83	300.00
IUUC-Ggr-039865	Gaeumannomyces graminis	78.01	4.00e-133	465.00
IUUC-Gga-040193	Gallus gallus	52.22	4.00e-84	302.00
IUUC-Gac-041337	Gasterosteus aculeatus	30.57	3.00e-31	127.00
IUUC-Gma-044311	Glycine max	52.90	4.00e-78	283.00
IUUC-Ggo-045252	Gorilla gorilla	52.56	3.00e-84	303.00
IUUC-Hsa-046565	Homo sapiens	52.56	3.00e-84	303.00
IUUC-Hvu-047835	Hordeum vulgare	52.20	5.00e-82	295.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	51.54	3.00e-83	299.00
IUUC-Kpa-049148	Komagataella pastoris	58.36	2.00e-97	347.00
IUUC-Lch-050421	Latimeria chalumnae	52.22	1.00e-83	301.00
IUUC-Lpe-051187	Leersia perrieri	51.69	7.00e-81	294.00
IUUC-Loc-052167	Lepisosteus oculatus	51.19	3.00e-84	303.00
IUUC-Lma-053250	Leptosphaeria maculans	70.59	1.00e-115	407.00
IUUC-Laf-054304	Loxodonta africana	51.54	1.00e-83	301.00
IUUC-Mcc-055519	Macaca mulatta	52.56	6.00e-84	302.00
IUUC-Meu-056439	Macropus eugenii	52.22	3.00e-84	303.00
IUUC-Mor-057241	Magnaporthe oryzae	79.04	6.00e-133	464.00
IUUC-Mpo-057373	Magnaporthe poae	68.62	7.00e-109	384.00
IUUC-Mtr-058412	Medicago truncatula	52.38	7.00e-77	278.00
IUUC-Mla-058966	Melampsora laricipopulina	50.46	8.00e-87	311.00
IUUC-Mga-060066	Meleagris gallopavo	51.89	9.00e-83	298.00
IUUC-Mvi-060290	Microbotryum violaceum	52.20	7.00e-85	308.00
IUUC-Mmr-060717	Microcebus murinus	51.54	2.00e-83	300.00
IUUC-Mdo-062496	Monodelphis domestica	51.88	4.00e-84	302.00
IUUC-Mmu-063490	Mus musculus	51.54	4.00e-83	299.00
IUUC-Mac-065307	Musa acuminata	52.61	3.00e-76	276.00
IUUC-Mpu-066601	Mustela putorius furo	51.54	5.00e-83	299.00
IUUC-Mlu-067501	Myotis lucifugus	51.88	1.00e-83	301.00
IUUC-Nfi-068360	Neosartorya fischeri	68.06	1.00e-105	374.00
IUUC-Ncr-068928	Neurospora crassa	83.39	2.00e-145	506.00
IUUC-Nle-069028	Nomascus leucogenys	52.22	5.00e-84	302.00
IUUC-Opr-070446	Ochotona princeps	50.86	2.00e-81	293.00
IUUC-Ont-071587	Oreochromis niloticus	52.90	4.00e-86	309.00
IUUC-Oan-073211	Ornithorhynchus anatinus	51.19	4.00e-83	299.00
IUUC-Ocu-074306	Oryctolagus cuniculus	51.19	4.00e-83	299.00
IUUC-Oba-075069	Oryza barthii	51.19	4.00e-80	289.00
IUUC-Obr-076667	Oryza brachyantha	52.20	2.00e-81	293.00
IUUC-Ogl-077208	Oryza glaberrima	51.19	4.00e-80	289.00
IUUC-Ogu-078513	Oryza glumaepatula	51.19	4.00e-80	289.00
IUUC-Oin-079094	Oryza indica	51.19	4.00e-80	289.00
IUUC-Olo-080473	Oryza longistaminata	51.19	4.00e-80	289.00
IUUC-Ome-081643	Oryza meridionalis	51.19	4.00e-80	289.00
IUUC-Oni-082589	Oryza nivara	51.19	4.00e-80	289.00
IUUC-Opu-083677	Oryza punctata	51.19	4.00e-80	289.00
IUUC-Oru-084537	Oryza rufipogon	51.19	4.00e-80	289.00
IUUC-Osa-085449	Oryza sativa	51.19	4.00e-80	289.00
IUUC-Ola-087226	Oryzias latipes	52.22	5.00e-85	305.00
IUUC-Olu-087893	Ostreococcus lucimarinus	46.96	5.00e-64	235.00
IUUC-Oga-088837	Otolemur garnettii	51.88	2.00e-83	300.00
IUUC-Oar-089594	Ovis aries	50.67	2.00e-82	296.00
IUUC-Ptr-091132	Pan troglodytes	52.56	2.00e-84	303.00
IUUC-Pan-092013	Papio anubis	30.92	3.00e-23	100.00
IUUC-Psi-093568	Pelodiscus sinensis	52.56	6.00e-84	301.00
IUUC-Pma-094172	Petromyzon marinus	47.17	9.00e-35	137.00
IUUC-Pno-094955	Phaeosphaeria nodorum	70.73	7.00e-115	404.00
IUUC-Ppa-095578	Physcomitrella patens	52.53	3.00e-77	280.00
IUUC-Pfo-096063	Poecilia formosa	52.22	4.00e-85	306.00
IUUC-Pab-098674	Pongo abelii	52.22	4.00e-83	299.00
IUUC-Pop-099402	Populus trichocarpa	51.88	4.00e-77	279.00
IUUC-Pca-100824	Procavia capensis	39.38	1.00e-56	211.00
IUUC-Ppe-101707	Prunus persica	52.22	4.00e-76	276.00
IUUC-Pva-103161	Pteropus vampyrus	47.78	7.00e-76	275.00
IUUC-Pgr-103573	Puccinia graminis	52.70	3.00e-90	323.00
IUUC-Ptt-103700	Puccinia triticina	51.26	3.00e-86	309.00
IUUC-Pte-104267	Pyrenophora teres	69.69	2.00e-113	399.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	69.90	2.00e-108	383.00
IUUC-Rno-104833	Rattus norvegicus	51.54	4.00e-83	299.00
IUUC-Sce-106437	Saccharomyces cerevisiae	60.75	2.00e-92	330.00
IUUC-Sha-106611	Sarcophilus harrisii	52.22	3.00e-84	303.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	58.56	2.00e-92	330.00
IUUC-Spo-108362	Schizosaccharomyces pombe	57.53	2.00e-90	323.00
IUUC-Smo-108797	Selaginella moellendorffii	49.83	7.00e-74	268.00
IUUC-Sit-110132	Setaria italica	50.85	4.00e-80	289.00
IUUC-Sly-111254	Solanum lycopersicum	52.72	2.00e-76	276.00
IUUC-Stu-112195	Solanum tuberosum	52.20	2.00e-76	276.00
IUUC-Sar-113279	Sorex araneus	30.80	2.00e-23	101.00
IUUC-Sbi-114229	Sorghum bicolor	51.53	3.00e-80	290.00
IUUC-Sre-114898	Sporisorium reilianum	48.09	2.00e-83	300.00
IUUC-Ssc-115995	Sus scrofa	59.17	1.00e-39	153.00
IUUC-Tgu-116793	Taeniopygia guttata	51.54	3.00e-80	290.00
IUUC-Tru-117797	Takifugu rubripes	51.88	2.00e-84	303.00
IUUC-Tsy-118913	Tarsius syrichta	30.66	4.00e-21	93.60
IUUC-Tni-120366	Tetraodon nigroviridis	52.90	4.00e-86	309.00
IUUC-Tca-121068	Theobroma cacao	52.61	4.00e-76	275.00
IUUC-Tre-121899	Trichoderma reesei	82.59	4.00e-146	508.00
IUUC-Tvi-122380	Trichoderma virens	83.22	2.00e-147	512.00
IUUC-Tae-123998	Triticum aestivum	52.20	3.00e-82	296.00
IUUC-Tur-126202	Triticum urartu	51.86	1.00e-81	294.00
IUUC-Tme-127181	Tuber melanosporum	60.07	1.00e-100	357.00
IUUC-Ttr-128448	Tursiops truncatus	48.65	5.00e-66	242.00
IUUC-Uma-129661	Ustilago maydis	49.11	1.00e-84	304.00
IUUC-Vpa-130318	Vicugna pacos	51.00	9.00e-83	298.00
IUUC-Vvi-130868	Vitis vinifera	51.88	3.00e-77	279.00
IUUC-Xtr-131859	Xenopus tropicalis	52.22	4.00e-84	302.00
IUUC-Xma-133898	Xiphophorus maculatus	52.22	2.00e-85	306.00
IUUC-Yli-134559	Yarrowia lipolytica	61.43	7.00e-98	348.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence