iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d007096	Zm00001d007096_T007	Zm00001d007096_T007
Zm00001d007096	Zm00001d007096_T011	Zm00001d007096_T011
Zm00001d007096	Zm00001d007096_T002	Zm00001d007096_T002
Zm00001d007096	Zm00001d007096_T010	Zm00001d007096_T010
Zm00001d007096	Zm00001d007096_T014	Zm00001d007096_T014
Zm00001d007096	Zm00001d007096_T008	Zm00001d007096_T008
Zm00001d007096	Zm00001d007096_T009	Zm00001d007096_T009

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.90e-62	211.2	833	1182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkg..ellkslqklfeelwkskkk.......avsprellkalkk 79
           +Gl+N gN C++N++LQ+L++++++ +ll +  ++++++  +++  +  el++++  l e++ k+k+k         +p ++ ++l++
   Q: 833  QGLRNTGNICFLNATLQALLSCSPFVHLLQDLRNRSIPKFGYPTLRAfvELISQFDVLDESVNKKKEKattvaakPLNPAMFDDVLRN 920
           6******************************99999999877555545699999999999887555555667666899999******* PP
   S: 80   eaeefs.....gyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknk...........slisdlFqgqlk 151
           + + +        +q+DaqEfl+f +d++++el k + +  +++e+   s++ d+a+e   +knk           s +s +F+gql+
   Q: 921  FTPDVPagitaRPRQEDAQEFLSFAMDRVHDELLKLNGNGLDSKEGMVVSSSADDAWETVGRKNKsaivrthsfvpSELSAIFGGQLQ 1008
           **99877887789********************77666666666666667777777777777777777777777778899******** PP
   S: 152  sqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsf 239
           s +k  + ++ s + +pfl l l++  +  +   +l+d+L+ f+++e+leg     +    ++++a+k++k++ lP+++ilhLkRfs+
   Q: 1009 SVVKA-AGNKASATVQPFLLLHLDIFPDAVQ---TLNDALRLFSTPESLEGYR--TTAGKAGLVTARKSFKIHALPKIMILHLKRFSY 1090
           87776.6778899****************98...****************933..3444568999*********************99 PP
   S: 240  seeqksrekinkkvefpleLdlsp.fctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevlee 325
            +  + ++ki k + f  eL ls+  ++sp+++    +kYeL+a + H+G  +  GHY+a++k+ +g+Wl+fdD+ V +v e++vl  
   Q: 1091 GN--NGSTKIYKPLGFTSELVLSRdLLSSPSQE---GRKYELVATITHHGrDPYRGHYTAHAKHADGQWLRFDDDAVVPVGENDVLH- 1172
           77..5778***************9677776655...8**************************************************. PP
   S: 326  tgstaYvlfYkr 337
             ++aYvlfYk+
   Q: 1173 --DQAYVLFYKQ 1182
           ..********97 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAPSSARDSP VPVGRGSRIL TRFLLHYLRA ATRRPPTLER EGTALAGLAD TAVHGMALVE 60
GTTECRHKLE RLMGLMLVQA TLDDLLVSSD DGGDVYIVNL VMRLVRVFVA SKEEADAPSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCAT CCTCCGCTCG CGATTCCCCC GTGCCCGTTG GAAGGGGGTC ACGGATCCTC 60
ACACGGTTCC TGCTGCACTA CCTCCGCGCT GCCACGCGCA GGCCGCCGAC GCTTGAGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR027356--NPH3_dom
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51649--NPH3
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF03000--NPH3
PF00443--UCH

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007717	Ashbya gossypii	28.13	9.00e-36	145.00
IUUC-Acl-008188	Aspergillus clavatus	32.53	6.00e-49	189.00
IUUC-Afl-008456	Aspergillus flavus	36.40	8.00e-38	150.00
IUUC-Afu-009067	Aspergillus fumigatus	32.62	5.00e-52	199.00
IUUC-Ani-009483	Aspergillus nidulans	33.52	5.00e-51	195.00
IUUC-Ang-009639	Aspergillus niger	33.15	4.00e-49	189.00
IUUC-Aor-010040	Aspergillus oryzae	32.41	4.00e-48	186.00
IUUC-Ate-010310	Aspergillus terreus	33.78	6.00e-49	189.00
IUUC-Bgr-012311	Blumeria graminis	31.15	2.00e-37	150.00
IUUC-Bci-013783	Botrytis cinerea	33.25	3.00e-43	170.00
IUUC-Cre-022713	Chlamydomonas reinhardtii	38.27	1.00e-38	154.00
IUUC-Cin-025616	Ciona intestinalis	30.03	4.00e-40	159.00
IUUC-Csv-026043	Ciona savignyi	31.79	4.00e-41	161.00
IUUC-Cgl-026421	Colletotrichum gloeosporioides	31.04	5.00e-35	142.00
IUUC-Cne-026962	Cryptococcus neoformans	31.27	6.00e-39	155.00
IUUC-Cme-027113	Cyanidioschyzon merolae	33.33	7.00e-40	158.00
IUUC-Dse-031553	Dothistroma septosporum	32.79	2.00e-44	173.00
IUUC-Dme-031759	Drosophila melanogaster	31.17	6.00e-43	169.00
IUUC-Fal-036627	Ficedula albicollis	30.87	7.00e-50	191.00
IUUC-Fox-037904	Fusarium oxysporum	33.91	5.00e-44	172.00
IUUC-Fso-038170	Fusarium solani	32.31	3.00e-37	150.00
IUUC-Ggr-040042	Gaeumannomyces graminis	33.33	8.00e-49	188.00
IUUC-Gac-041345	Gasterosteus aculeatus	32.23	2.00e-45	177.00
IUUC-Lma-053248	Leptosphaeria maculans	31.46	5.00e-45	176.00
IUUC-Mor-057243	Magnaporthe oryzae	33.51	2.00e-50	193.00
IUUC-Mpo-057439	Magnaporthe poae	34.32	3.00e-47	183.00
IUUC-Mla-058929	Melampsora laricipopulina	30.91	1.00e-35	144.00
IUUC-Mvi-060442	Microbotryum violaceum	31.08	8.00e-44	172.00
IUUC-Nfi-068612	Neosartorya fischeri	32.17	1.00e-49	191.00
IUUC-Ncr-068878	Neurospora crassa	32.40	9.00e-41	161.00
IUUC-Ocu-073788	Oryctolagus cuniculus	29.81	3.00e-46	179.00
IUUC-Pno-095136	Phaeosphaeria nodorum	31.36	3.00e-37	150.00
IUUC-Ppa-095574	Physcomitrella patens	53.26	1.00e-105	376.00
IUUC-Pfo-097462	Poecilia formosa	31.75	4.00e-45	176.00
IUUC-Ptt-103998	Puccinia triticina	30.08	3.00e-39	156.00
IUUC-Pte-104417	Pyrenophora teres	32.38	3.00e-46	179.00
IUUC-Pyt-104820	Pyrenophora triticirepentis	32.19	5.00e-46	179.00
IUUC-Sce-106160	Saccharomyces cerevisiae	25.32	6.00e-32	132.00
IUUC-Spo-108353	Schizosaccharomyces pombe	32.43	5.00e-45	175.00
IUUC-Ssl-108599	Sclerotinia sclerotiorum	32.22	3.00e-43	169.00
IUUC-Smo-109645	Selaginella moellendorffii	46.03	3.00e-55	207.00
IUUC-Sre-115162	Sporisorium reilianum	32.49	1.00e-44	174.00
IUUC-Tgu-116535	Taeniopygia guttata	30.87	4.00e-50	192.00
IUUC-Tre-122124	Trichoderma reesei	32.24	7.00e-44	171.00
IUUC-Tvi-122457	Trichoderma virens	30.25	3.00e-37	149.00
IUUC-Tme-127180	Tuber melanosporum	34.82	3.00e-51	196.00
IUUC-Uma-129381	Ustilago maydis	32.27	4.00e-47	182.00
IUUC-Vda-129889	Verticillium dahliae	31.14	4.00e-39	156.00
IUUC-Yli-134338	Yarrowia lipolytica	27.25	6.00e-24	105.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence