iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018044

Ensembl Protein ID

Bra012753.1-P

UniProt Accession

M4D8E3; M4D8E3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012753	Bra012753.1	Bra012753.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-43	146.3	169	205
UBD/Beta-Prp	8.00e-66	223.2	222	414

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH ++v+++af  s+  +++Gs D tik+WD+ tgvl
   Q: 169  GHLGWVRSVAFdpSNEWFCTGSADRTIKIWDVATGVL 205
           8***********54499******************97 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGsh 114
           s+  ++++++++d+ +k wd+++ k++rs+ gh ++v+++ ++p+ ++l+tg++D + +vwd++t  ++ +l+gh+++v+s+   p++  +v+Gsh
   Q: 222  SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALTGHDNTVCSVFTRPTDPQVVTGSH 317
           57789******************************************************************************************* PP
   S: 115  drtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq 210
           d ti+ wdl+ g+ +  tl+ h+++v+ +++hp++n ++s+s+D+t + ++l+ g+  + + ++++  ++ ++++++g  +v+g+++g++ +wd +
   Q: 318  DTTIKFWDLRYGKTMT-TLTHHKKSVRAMTLHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQKTIINAMAVNEDG-VMVTGGDNGSIWFWDWK 410
           ***************9.*****************************99.99*999999999999************98.99*************** PP
   S: 211  tgec 214
           +g+ 
   Q: 411  SGHS 414
           9974 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPAATTEAES IEPQSLKKLS IKSLKRALDL FSPVHGQFPP PDAEAKKIRL SHKMKVAFGG 60
VEPVSQPPRQ PDRGNEHTGT SSALALPGPE GSKSTQKGVT ENALVVGPTF QPKGLNSIGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGCTG CGACGACGGA GGCTGAATCA ATAGAACCAC AGTCGCTGAA AAAGCTGAGC 60
ATCAAATCCC TAAAACGAGC TCTTGATCTC TTCTCCCCCG TCCACGGCCA ATTCCCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0048825--P:cotyledon development
GO:0009870--P:defense response signaling pathway, resistance gene-dependent
GO:0010204--P:defense response signaling pathway, resistance gene-independent
GO:0042742--P:defense response to bacterium
GO:0050832--P:defense response to fungus
GO:0009755--P:hormone-mediated signaling pathway
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0006508--P:proteolysis
GO:0009749--P:response to glucose
GO:0048364--P:root development
GO:0010182--P:sugar mediated signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000084	Aegilops tauschii	69.69	0.00e+00	682.00
IUUC-Aml-001605	Ailuropoda melanoleuca	46.32	2.00e-129	455.00
IUUC-Atr-002757	Amborella trichopoda	69.96	0.00e+00	681.00
IUUC-Apl-003198	Anas platyrhynchos	46.03	8.00e-129	453.00
IUUC-Aca-004683	Anolis carolinensis	46.65	2.00e-127	449.00
IUUC-Aly-005775	Arabidopsis lyrata	93.76	0.00e+00	919.00
IUUC-Ath-007460	Arabidopsis thaliana	92.39	0.00e+00	904.00
IUUC-Ago-007884	Ashbya gossypii	51.16	4.00e-104	370.00
IUUC-Acl-008153	Aspergillus clavatus	60.24	2.00e-118	419.00
IUUC-Afl-008384	Aspergillus flavus	55.15	1.00e-119	422.00
IUUC-Afu-009045	Aspergillus fumigatus	60.24	6.00e-118	417.00
IUUC-Ani-009229	Aspergillus nidulans	60.12	1.00e-118	419.00
IUUC-Ang-009812	Aspergillus niger	60.25	1.00e-110	392.00
IUUC-Aor-010059	Aspergillus oryzae	55.15	1.00e-119	422.00
IUUC-Ate-010351	Aspergillus terreus	55.41	4.00e-127	447.00
IUUC-Ame-011613	Astyanax mexicanus	38.15	2.00e-72	266.00
IUUC-Bgr-012042	Blumeria graminis	59.77	6.00e-129	453.00
IUUC-Bta-012406	Bos taurus	47.92	1.00e-128	452.00
IUUC-Bci-013760	Botrytis cinerea	57.22	1.00e-123	436.00
IUUC-Bdi-014776	Brachypodium distachyon	74.16	0.00e+00	706.00
IUUC-Bol-016189	Brassica oleracea	99.38	0.00e+00	972.00
IUUC-Cel-018651	Caenorhabditis elegans	50.20	4.00e-134	471.00
IUUC-Cja-019974	Callithrix jacchus	45.74	5.00e-128	450.00
IUUC-Cfa-021085	Canis familiaris	48.13	2.00e-129	456.00
IUUC-Cpo-021458	Cavia porcellus	48.02	1.00e-130	459.00
IUUC-Cre-022880	Chlamydomonas reinhardtii	72.01	9.00e-157	545.00
IUUC-Csa-023883	Chlorocebus sabaeus	45.63	8.00e-127	446.00
IUUC-Cho-024623	Choloepus hoffmanni	47.02	1.00e-125	442.00
IUUC-Cin-025190	Ciona intestinalis	46.17	1.00e-126	446.00
IUUC-Csv-026367	Ciona savignyi	46.25	3.00e-126	445.00
IUUC-Cgl-026499	Colletotrichum gloeosporioides	60.98	1.00e-124	439.00
IUUC-Cne-027069	Cryptococcus neoformans	48.74	9.00e-117	413.00
IUUC-Dre-028260	Danio rerio	48.91	5.00e-134	470.00
IUUC-Dno-029112	Dasypus novemcinctus	46.73	2.00e-130	459.00
IUUC-Dor-031118	Dipodomys ordii	54.98	3.00e-127	448.00
IUUC-Dse-031493	Dothistroma septosporum	58.81	2.00e-121	429.00
IUUC-Dme-032138	Drosophila melanogaster	48.12	1.00e-132	466.00
IUUC-Ete-032411	Echinops telfairi	53.13	2.00e-102	365.00
IUUC-Eca-033521	Equus caballus	46.25	6.00e-129	454.00
IUUC-Eeu-035249	Erinaceus europaeus	46.55	4.00e-100	358.00
IUUC-Fca-036358	Felis catus	46.51	1.00e-129	456.00
IUUC-Fal-036933	Ficedula albicollis	46.50	7.00e-131	460.00
IUUC-Fox-037713	Fusarium oxysporum	57.18	2.00e-125	441.00
IUUC-Fso-038380	Fusarium solani	62.01	7.00e-126	443.00
IUUC-Gmo-039133	Gadus morhua	48.21	7.00e-132	463.00
IUUC-Ggr-039915	Gaeumannomyces graminis	60.79	6.00e-119	421.00
IUUC-Gga-041176	Gallus gallus	46.35	7.00e-128	450.00
IUUC-Gac-042344	Gasterosteus aculeatus	48.92	3.00e-132	464.00
IUUC-Gma-042892	Glycine max	80.50	0.00e+00	788.00
IUUC-Ggo-044478	Gorilla gorilla	45.61	9.00e-128	449.00
IUUC-Hsa-046037	Homo sapiens	45.63	7.00e-127	447.00
IUUC-Hvu-047349	Hordeum vulgare	73.91	0.00e+00	700.00
IUUC-Itr-048390	Ictidomys tridecemlineatus	46.64	8.00e-130	456.00
IUUC-Kpa-049343	Komagataella pastoris	56.07	1.00e-114	406.00
IUUC-Lch-049830	Latimeria chalumnae	47.72	3.00e-130	458.00
IUUC-Lpe-051442	Leersia perrieri	72.96	0.00e+00	699.00
IUUC-Loc-051794	Lepisosteus oculatus	48.08	5.00e-127	447.00
IUUC-Lma-053137	Leptosphaeria maculans	57.68	7.00e-122	430.00
IUUC-Laf-053471	Loxodonta africana	47.43	5.00e-129	454.00
IUUC-Mcc-055627	Macaca mulatta	45.63	3.00e-128	451.00
IUUC-Meu-056148	Macropus eugenii	46.84	3.00e-124	438.00
IUUC-Mor-056960	Magnaporthe oryzae	60.67	1.00e-123	436.00
IUUC-Mtr-057816	Medicago truncatula	77.99	0.00e+00	779.00
IUUC-Mla-059031	Melampsora laricipopulina	60.12	5.00e-115	407.00
IUUC-Mga-059337	Meleagris gallopavo	45.77	2.00e-127	449.00
IUUC-Mvi-060217	Microbotryum violaceum	57.99	6.00e-118	417.00
IUUC-Mmr-061018	Microcebus murinus	47.63	2.00e-129	455.00
IUUC-Mdo-062863	Monodelphis domestica	45.70	2.00e-124	438.00
IUUC-Mmu-063988	Mus musculus	46.58	7.00e-130	457.00
IUUC-Mac-064459	Musa acuminata	73.25	0.00e+00	677.00
IUUC-Mpu-066559	Mustela putorius furo	46.51	2.00e-129	455.00
IUUC-Mlu-067361	Myotis lucifugus	47.48	1.00e-127	449.00
IUUC-Nfi-068492	Neosartorya fischeri	59.94	9.00e-118	416.00
IUUC-Ncr-068808	Neurospora crassa	60.18	2.00e-124	438.00
IUUC-Nle-069875	Nomascus leucogenys	45.63	9.00e-127	446.00
IUUC-Opr-070462	Ochotona princeps	58.80	1.00e-95	343.00
IUUC-Ont-071365	Oreochromis niloticus	49.11	1.00e-133	469.00
IUUC-Oan-072708	Ornithorhynchus anatinus	45.90	6.00e-127	447.00
IUUC-Ocu-074594	Oryctolagus cuniculus	47.83	1.00e-128	452.00
IUUC-Oba-075570	Oryza barthii	73.53	0.00e+00	682.00
IUUC-Obr-076366	Oryza brachyantha	89.12	3.00e-132	463.00
IUUC-Ogl-077153	Oryza glaberrima	74.00	0.00e+00	679.00
IUUC-Ogu-078540	Oryza glumaepatula	74.21	0.00e+00	682.00
IUUC-Oin-079612	Oryza indica	72.77	0.00e+00	677.00
IUUC-Olo-081077	Oryza longistaminata	72.77	0.00e+00	677.00
IUUC-Ome-081236	Oryza meridionalis	73.24	0.00e+00	676.00
IUUC-Oni-082499	Oryza nivara	74.21	0.00e+00	682.00
IUUC-Opu-083499	Oryza punctata	72.77	0.00e+00	677.00
IUUC-Oru-084276	Oryza rufipogon	74.21	0.00e+00	682.00
IUUC-Osa-085849	Oryza sativa	74.21	0.00e+00	682.00
IUUC-Ola-086655	Oryzias latipes	47.36	1.00e-131	462.00
IUUC-Olu-087637	Ostreococcus lucimarinus	66.20	2.00e-145	508.00
IUUC-Oga-087934	Otolemur garnettii	47.34	2.00e-129	455.00
IUUC-Oar-090185	Ovis aries	47.72	1.00e-128	452.00
IUUC-Ptr-091198	Pan troglodytes	45.63	9.00e-127	446.00
IUUC-Pan-092622	Papio anubis	45.63	8.00e-127	446.00
IUUC-Psi-093320	Pelodiscus sinensis	46.86	8.00e-128	450.00
IUUC-Pma-094638	Petromyzon marinus	46.15	2.00e-130	459.00
IUUC-Pno-094826	Phaeosphaeria nodorum	50.72	2.00e-101	362.00
IUUC-Ppa-095576	Physcomitrella patens	65.38	1.00e-170	592.00
IUUC-Pfo-096894	Poecilia formosa	48.92	1.00e-130	459.00
IUUC-Pab-098020	Pongo abelii	45.63	3.00e-128	451.00
IUUC-Pop-099180	Populus trichocarpa	77.75	0.00e+00	765.00
IUUC-Pca-100909	Procavia capensis	43.44	3.00e-99	355.00
IUUC-Ppe-101346	Prunus persica	77.62	0.00e+00	752.00
IUUC-Pva-102167	Pteropus vampyrus	47.20	6.00e-107	380.00
IUUC-Pgr-103516	Puccinia graminis	57.94	5.00e-113	400.00
IUUC-Ptt-103738	Puccinia triticina	58.57	5.00e-113	400.00
IUUC-Pte-104352	Pyrenophora teres	59.47	3.00e-125	441.00
IUUC-Pyt-104632	Pyrenophora triticirepentis	59.17	4.00e-125	441.00
IUUC-Rno-105291	Rattus norvegicus	46.73	2.00e-129	455.00
IUUC-Sce-106204	Saccharomyces cerevisiae	53.33	7.00e-107	380.00
IUUC-Sha-106943	Sarcophilus harrisii	44.44	1.00e-120	426.00
IUUC-Sja-107659	Schizosaccharomyces japonicus	62.27	2.00e-120	425.00
IUUC-Spo-108049	Schizosaccharomyces pombe	49.90	3.00e-125	441.00
IUUC-Smo-109043	Selaginella moellendorffii	79.47	5.00e-175	606.00
IUUC-Sit-110431	Setaria italica	73.76	0.00e+00	710.00
IUUC-Sly-111391	Solanum lycopersicum	74.74	0.00e+00	689.00
IUUC-Stu-112364	Solanum tuberosum	71.38	8.00e-131	459.00
IUUC-Sar-113450	Sorex araneus	60.66	1.00e-124	439.00
IUUC-Sbi-113829	Sorghum bicolor	73.86	0.00e+00	712.00
IUUC-Sre-115153	Sporisorium reilianum	56.35	2.00e-110	392.00
IUUC-Ssc-116274	Sus scrofa	47.43	2.00e-128	452.00
IUUC-Tgu-117417	Taeniopygia guttata	46.34	1.00e-128	452.00
IUUC-Tru-117615	Takifugu rubripes	47.71	9.00e-126	443.00
IUUC-Tsy-119480	Tarsius syrichta	46.52	1.00e-129	456.00
IUUC-Tni-119847	Tetraodon nigroviridis	48.11	7.00e-131	460.00
IUUC-Tca-121287	Theobroma cacao	78.03	0.00e+00	787.00
IUUC-Tre-122010	Trichoderma reesei	60.37	5.00e-123	434.00
IUUC-Tvi-122475	Trichoderma virens	56.63	4.00e-123	434.00
IUUC-Tae-124397	Triticum aestivum	73.91	0.00e+00	710.00
IUUC-Tur-126116	Triticum urartu	63.76	4.00e-160	557.00
IUUC-Tme-126992	Tuber melanosporum	60.37	1.00e-124	439.00
IUUC-Tbe-127803	Tupaia belangeri	60.92	1.00e-95	342.00
IUUC-Ttr-128933	Tursiops truncatus	47.91	2.00e-128	452.00
IUUC-Uma-129447	Ustilago maydis	55.76	3.00e-110	392.00
IUUC-Vda-129780	Verticillium dahliae	59.76	7.00e-124	437.00
IUUC-Vpa-130557	Vicugna pacos	43.30	1.00e-44	174.00
IUUC-Vvi-130918	Vitis vinifera	79.18	0.00e+00	773.00
IUUC-Xtr-132409	Xenopus tropicalis	46.03	4.00e-128	451.00
IUUC-Xma-133420	Xiphophorus maculatus	47.91	5.00e-132	464.00
IUUC-Yli-134362	Yarrowia lipolytica	60.25	2.00e-120	425.00
IUUC-Zma-135804	Zea mays	71.02	0.00e+00	688.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence