iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093710

Ensembl Protein ID

ENSPSIP00000012962.1

UniProt Accession

K7FY52; K7FY52_PELSI

Genbank Protein ID

ENSPSIP00000012962

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01141694

Gene Name

WDR62

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000011655.1	ENSPSIT00000013024.1	ENSPSIP00000012962.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-30	102.0	93	131
UBD/Beta-Prp	4.50e-58	196.8	424	538

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGs..dDgtikvWDlrtgvl 35
           gH+ +v c+af ++ +++vs +  +D t+ vWD+++++l
   Q: 93   GHKHGVGCVAFsPNmKYIVSVGyqHDMTVNVWDWKKNTL 131
           8***********888*******9**********988766 PP

UBD/Beta-Prp

   S: 51   heaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..sg.dklvsGshdrtirvwdletgqcleetlsgh 136
            +a+v+ +++spdg+ l++g + +++++ +l+    v+++++h+++vl+l++s+  +g   l+s+s+dr i+v +++++++le+tl+ h
   Q: 424  VKAGVRVMQISPDGQHLASGDRGGNLRIHELQFMHEVIKVEAHDSEVLCLEYSKpeTGmALLASASRDRLIHVLNVDKKYKLEQTLDDH 512
           5789**************************************************98889****************************** PP
   S: 137  dgvvncvvvhpdg.nllvsGslDrtv 161
           +++++ v++ ++g   ++s+++D+ +
   Q: 513  SSAITAVKFAGNGeVQMISCGADKSI 538
           *************999*******998 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MLEKVLGITT QTSSGLACDP NTGQIAYPAG CVVVILNPQK NKQRHIFNTS RKTLSALSFS 60
PDGKFIVTGE NGHRPAVRVW DVEEKTQVSE LHGHKHGVGC VAFSPNMKYI VSVGYQHDMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTATGCTTG AGAAAGTGCT GGGAATAACT ACCCAAACCA GTAGCGGTTT AGCTTGTGAC 60
CCAAATACCG GGCAGATAGC ATATCCTGCA GGGTAAGTGA CTAAACGTGA AAATGTATAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR030545--WDR62

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005813--C:centrosome
GO:0005634--C:nucleus
GO:0000922--C:spindle pole
GO:0007099--P:centriole replication
GO:0021987--P:cerebral cortex development
GO:0007052--P:mitotic spindle organization
GO:0022008--P:neurogenesis

KEGG

pss:102456234

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001371	Ailuropoda melanoleuca	64.78	0.00e+00	1360.00
IUUC-Aca-004935	Anolis carolinensis	79.40	0.00e+00	1114.00
IUUC-Aly-006434	Arabidopsis lyrata	31.49	2.00e-59	224.00
IUUC-Afl-008426	Aspergillus flavus	22.27	1.00e-31	131.00
IUUC-Afu-008757	Aspergillus fumigatus	22.33	6.00e-31	129.00
IUUC-Aor-009966	Aspergillus oryzae	22.27	1.00e-31	131.00
IUUC-Ame-010799	Astyanax mexicanus	59.01	0.00e+00	1013.00
IUUC-Bgr-012083	Blumeria graminis	23.58	2.00e-32	134.00
IUUC-Bta-013336	Bos taurus	65.31	0.00e+00	1384.00
IUUC-Bci-013828	Botrytis cinerea	24.63	3.00e-36	147.00
IUUC-Cja-019094	Callithrix jacchus	63.02	0.00e+00	1345.00
IUUC-Cfa-020529	Canis familiaris	62.85	0.00e+00	1394.00
IUUC-Cpo-021970	Cavia porcellus	68.54	0.00e+00	1241.00
IUUC-Cre-022999	Chlamydomonas reinhardtii	29.05	3.00e-15	77.00
IUUC-Csa-024161	Chlorocebus sabaeus	59.88	0.00e+00	1301.00
IUUC-Cho-024310	Choloepus hoffmanni	65.64	0.00e+00	855.00
IUUC-Cgl-026454	Colletotrichum gloeosporioides	21.65	5.00e-24	106.00
IUUC-Dno-029933	Dasypus novemcinctus	59.49	0.00e+00	1229.00
IUUC-Dor-031147	Dipodomys ordii	61.88	0.00e+00	1313.00
IUUC-Dse-031501	Dothistroma septosporum	23.63	6.00e-35	142.00
IUUC-Eca-033675	Equus caballus	61.73	0.00e+00	1357.00
IUUC-Fca-035826	Felis catus	63.89	0.00e+00	1369.00
IUUC-Ggo-045152	Gorilla gorilla	62.96	0.00e+00	1337.00
IUUC-Hsa-045891	Homo sapiens	62.99	0.00e+00	1324.00
IUUC-Itr-048019	Ictidomys tridecemlineatus	74.30	0.00e+00	1231.00
IUUC-Lch-049669	Latimeria chalumnae	58.64	0.00e+00	1022.00
IUUC-Loc-052488	Lepisosteus oculatus	53.23	0.00e+00	1086.00
IUUC-Lma-053327	Leptosphaeria maculans	25.22	2.00e-37	150.00
IUUC-Laf-053992	Loxodonta africana	62.02	0.00e+00	1350.00
IUUC-Mcc-054994	Macaca mulatta	61.40	0.00e+00	1338.00
IUUC-Meu-056815	Macropus eugenii	70.42	0.00e+00	1227.00
IUUC-Mmr-060693	Microcebus murinus	64.17	0.00e+00	1383.00
IUUC-Mdo-063007	Monodelphis domestica	64.36	0.00e+00	1401.00
IUUC-Mmu-064067	Mus musculus	64.35	0.00e+00	1362.00
IUUC-Mpu-066532	Mustela putorius furo	64.88	0.00e+00	1379.00
IUUC-Mlu-066982	Myotis lucifugus	64.39	0.00e+00	1353.00
IUUC-Nle-070042	Nomascus leucogenys	63.49	0.00e+00	1325.00
IUUC-Opr-070397	Ochotona princeps	63.42	0.00e+00	1337.00
IUUC-Ont-072333	Oreochromis niloticus	49.52	0.00e+00	914.00
IUUC-Ocu-074274	Oryctolagus cuniculus	65.54	0.00e+00	1365.00
IUUC-Oga-088577	Otolemur garnettii	64.23	0.00e+00	1362.00
IUUC-Oar-090117	Ovis aries	62.32	0.00e+00	1310.00
IUUC-Ptr-090553	Pan troglodytes	62.99	0.00e+00	1333.00
IUUC-Pab-098510	Pongo abelii	64.13	0.00e+00	1339.00
IUUC-Pca-100323	Procavia capensis	54.65	0.00e+00	981.00
IUUC-Pva-102895	Pteropus vampyrus	65.22	0.00e+00	1403.00
IUUC-Pte-104373	Pyrenophora teres	24.41	5.00e-31	129.00
IUUC-Pyt-104804	Pyrenophora triticirepentis	25.00	5.00e-31	129.00
IUUC-Rno-105598	Rattus norvegicus	64.66	0.00e+00	1375.00
IUUC-Sha-107013	Sarcophilus harrisii	66.30	0.00e+00	1420.00
IUUC-Ssl-108471	Sclerotinia sclerotiorum	24.23	7.00e-31	129.00
IUUC-Sar-113261	Sorex araneus	62.85	0.00e+00	1329.00
IUUC-Ssc-115317	Sus scrofa	64.84	0.00e+00	1357.00
IUUC-Tsy-118799	Tarsius syrichta	70.99	0.00e+00	681.00
IUUC-Tre-122008	Trichoderma reesei	22.25	1.00e-26	115.00
IUUC-Ttr-128722	Tursiops truncatus	62.65	0.00e+00	1301.00
IUUC-Vda-129957	Verticillium dahliae	23.76	2.00e-29	124.00
IUUC-Vpa-130392	Vicugna pacos	72.50	3.00e-66	246.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence