iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058269

Ensembl Protein ID

KEH23694

UniProt Accession

A0A072U1V4; A0A072U1V4_MEDTR

Genbank Protein ID

KEH23694.1

Protein Name

SCF ubiquitin ligase, SKP1 component

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g094150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g094150	KEH23694	KEH23694

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.90e-32	112.6	107	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           ksLLdltc+tVadmikgktpeeiRktFni+nDftpeEe++vR+EnqWA
   Q: 107  KSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 154
           89*********************************************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSTSKKITL KSSDNETFEV PEAVALESQT IKHMIEDDCT DNGIPVPNVT GQILAKVIEY 60
CKKHVDAESS DEKPSEDDLK NWDAEFVKVD QDKLFDLILA ANYLNIKSLL DLTCQTVADM 120

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Nucleotide Sequence
(Fasta)

ATGTCTTCAA CCAGCAAGAA GATCACTCTC AAGAGTTCCG ACAACGAAAC CTTTGAGGTT 60
CCCGAGGCTG TGGCACTTGA ATCGCAGACG ATCAAGCACA TGATCGAGGA CGATTGTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_7g094150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cgl-026548	Colletotrichum gloeosporioides	51.02	5.00e-35	139.00
IUUC-Fso-038451	Fusarium solani	48.67	9.00e-35	138.00
IUUC-Pno-094810	Phaeosphaeria nodorum	49.65	7.00e-33	132.00
IUUC-Pte-104224	Pyrenophora teres	45.95	1.00e-29	122.00
IUUC-Ssl-108591	Sclerotinia sclerotiorum	49.66	6.00e-35	139.00
IUUC-Tre-122004	Trichoderma reesei	43.42	6.00e-29	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence