iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114666

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G280200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g031280	Sb02g031280.1	Sb02g031280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.20e-32	112.6	124	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiRktFni+nDftpeEe++vR+EnqWA
   Q: 124  KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 171
           89*********************************************9 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAEAAAAGK EKMLTLISSD LEKFEVEESA ARESRTIGNM IEDSCADNDI PLPNVNARIL 60
AKVIVYCRKH ASARGGTDAG DAEPTAATNK ASEDELKTFD AEFVKVDQAT LFDLILAANY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTCGCTTC CGCCGCTAGG GTTTCCTTTG TAGCGGGTTT TTTTCCTCTC GAGACACACC 60
TCCACCACAG TCCACACCCG GCGGTCGGAT CGATGGCGGC GGAAGCGGCG GCTGCGGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g031280

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012280	Blumeria graminis	49.32	2.00e-32	130.00
IUUC-Cja-019785	Callithrix jacchus	55.03	4.00e-35	139.00
IUUC-Cre-022751	Chlamydomonas reinhardtii	66.25	1.00e-50	191.00
IUUC-Cgl-026548	Colletotrichum gloeosporioides	48.05	4.00e-33	133.00
IUUC-Dme-032028	Drosophila melanogaster	53.01	3.00e-38	149.00
IUUC-Fox-037761	Fusarium oxysporum	47.97	1.00e-32	131.00
IUUC-Fso-038451	Fusarium solani	48.65	4.00e-34	136.00
IUUC-Ggr-039831	Gaeumannomyces graminis	46.10	7.00e-33	132.00
IUUC-Lch-050522	Latimeria chalumnae	56.17	1.00e-40	157.00
IUUC-Lma-053020	Leptosphaeria maculans	44.30	8.00e-31	125.00
IUUC-Mor-057176	Magnaporthe oryzae	46.10	1.00e-32	131.00
IUUC-Mpo-057471	Magnaporthe poae	46.10	5.00e-33	132.00
IUUC-Mvi-060342	Microbotryum violaceum	51.23	5.00e-37	145.00
IUUC-Ncr-068658	Neurospora crassa	46.36	1.00e-31	127.00
IUUC-Oar-089762	Ovis aries	45.00	7.00e-33	132.00
IUUC-Pno-094810	Phaeosphaeria nodorum	44.90	1.00e-29	121.00
IUUC-Ppa-095244	Physcomitrella patens	69.94	9.00e-54	201.00
IUUC-Pca-100783	Procavia capensis	51.09	6.00e-28	115.00
IUUC-Ppe-101549	Prunus persica	74.68	3.00e-54	202.00
IUUC-Pgr-103499	Puccinia graminis	49.38	2.00e-36	144.00
IUUC-Pte-104224	Pyrenophora teres	44.30	9.00e-28	115.00
IUUC-Pyt-104750	Pyrenophora triticirepentis	44.74	5.00e-29	119.00
IUUC-Sja-107902	Schizosaccharomyces japonicus	50.31	5.00e-35	139.00
IUUC-Spo-108033	Schizosaccharomyces pombe	50.94	9.00e-35	138.00
IUUC-Ssl-108591	Sclerotinia sclerotiorum	45.75	1.00e-31	128.00
IUUC-Smo-109307	Selaginella moellendorffii	69.38	5.00e-53	199.00
IUUC-Sit-110435	Setaria italica	79.04	8.00e-64	234.00
IUUC-Sly-111529	Solanum lycopersicum	73.46	3.00e-58	216.00
IUUC-Stu-111940	Solanum tuberosum	73.29	9.00e-58	214.00
IUUC-Tre-122004	Trichoderma reesei	40.65	4.00e-24	103.00
IUUC-Tvi-122449	Trichoderma virens	40.65	8.00e-25	105.00
IUUC-Vda-129691	Verticillium dahliae	47.95	2.00e-31	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence