iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022704

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496118

Gene Name

CHLREDRAFT_144515

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_144515	EDP05239	EDP05239

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-08	33.9	282	316

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H+++vt+la  ++ t++++++ D +ik+WD+r  +
   Q: 282  HQGPVTALAVdPSgTYMATAGSDSQIKLWDVRMLK 316
           9**********666****************98665 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MAEGDKPRVD EEAKANRKRK KKLDPDVAET AKRLKRGPGV DLKSITDKKL KGKLRRAENV 60
FAASQKKAVQ ISEWLLPASA GALEAEGVER TWNFKQQDIV AAVDVTAARK AFDLSLPELG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACTACATTT CACTACAGCT TGTGAGTTTG GCTAAAAACG TGGTGTTCTC GTCCGTCCCT 60
TCGCCTTTTA GACGGCTGTA AAATACAGCG TTCTTCTTGA GTGACATTAT TGTGCAAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

cre:CHLREDRAFT_144515

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	45.60	6.00e-128	449.00
IUUC-Atr-002528	Amborella trichopoda	51.68	9.00e-132	461.00
IUUC-Aly-005663	Arabidopsis lyrata	43.81	5.00e-122	429.00
IUUC-Ath-007405	Arabidopsis thaliana	43.43	4.00e-120	423.00
IUUC-Ang-009764	Aspergillus niger	40.38	1.00e-114	405.00
IUUC-Ame-011572	Astyanax mexicanus	40.00	7.00e-101	359.00
IUUC-Bdi-014459	Brachypodium distachyon	50.24	4.00e-123	432.00
IUUC-Bol-015169	Brassica oleracea	49.18	1.00e-119	422.00
IUUC-Bra-016837	Brassica rapa	48.04	2.00e-116	410.00
IUUC-Cel-018465	Caenorhabditis elegans	39.71	2.00e-100	357.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	43.41	3.00e-125	440.00
IUUC-Cne-026784	Cryptococcus neoformans	42.18	8.00e-89	319.00
IUUC-Dre-028533	Danio rerio	40.91	1.00e-94	338.00
IUUC-Dse-031280	Dothistroma septosporum	41.76	3.00e-116	410.00
IUUC-Eeu-034982	Erinaceus europaeus	37.12	8.00e-56	209.00
IUUC-Fox-037980	Fusarium oxysporum	42.42	5.00e-116	409.00
IUUC-Fso-038154	Fusarium solani	43.98	1.00e-120	425.00
IUUC-Gmo-039548	Gadus morhua	41.24	4.00e-101	360.00
IUUC-Ggr-039976	Gaeumannomyces graminis	42.16	2.00e-120	424.00
IUUC-Gac-042249	Gasterosteus aculeatus	41.45	5.00e-103	366.00
IUUC-Gma-042693	Glycine max	45.79	8.00e-129	452.00
IUUC-Hvu-047436	Hordeum vulgare	52.07	1.00e-86	311.00
IUUC-Kpa-049329	Komagataella pastoris	43.25	1.00e-105	374.00
IUUC-Lpe-051501	Leersia perrieri	50.96	2.00e-115	410.00
IUUC-Loc-051736	Lepisosteus oculatus	43.09	1.00e-98	351.00
IUUC-Meu-056419	Macropus eugenii	47.65	3.00e-88	317.00
IUUC-Mor-057146	Magnaporthe oryzae	43.58	8.00e-120	422.00
IUUC-Mpo-057512	Magnaporthe poae	42.01	8.00e-121	425.00
IUUC-Mtr-058139	Medicago truncatula	45.40	2.00e-129	454.00
IUUC-Mla-059028	Melampsora laricipopulina	39.39	6.00e-96	342.00
IUUC-Mvi-060533	Microbotryum violaceum	44.55	5.00e-103	366.00
IUUC-Mac-065643	Musa acuminata	48.34	1.00e-132	464.00
IUUC-Ont-071977	Oreochromis niloticus	42.32	1.00e-102	365.00
IUUC-Oba-075525	Oryza barthii	50.60	6.00e-123	432.00
IUUC-Obr-076468	Oryza brachyantha	50.24	2.00e-123	434.00
IUUC-Ogl-077395	Oryza glaberrima	50.60	6.00e-123	432.00
IUUC-Ogu-078730	Oryza glumaepatula	50.60	1.00e-122	431.00
IUUC-Oin-079797	Oryza indica	50.60	5.00e-123	432.00
IUUC-Olo-080539	Oryza longistaminata	50.36	4.00e-122	430.00
IUUC-Oni-082635	Oryza nivara	50.60	6.00e-123	432.00
IUUC-Opu-083733	Oryza punctata	50.36	8.00e-124	435.00
IUUC-Oru-084560	Oryza rufipogon	50.60	5.00e-123	432.00
IUUC-Osa-085463	Oryza sativa	50.60	4.00e-123	432.00
IUUC-Ola-086667	Oryzias latipes	45.16	3.00e-107	380.00
IUUC-Olu-087881	Ostreococcus lucimarinus	48.78	1.00e-149	521.00
IUUC-Pma-094742	Petromyzon marinus	44.50	1.00e-89	321.00
IUUC-Ppa-095230	Physcomitrella patens	53.06	8.00e-156	541.00
IUUC-Pop-099756	Populus trichocarpa	50.60	4.00e-126	442.00
IUUC-Ppe-101354	Prunus persica	48.37	1.00e-124	438.00
IUUC-Pte-104146	Pyrenophora teres	40.00	4.00e-107	380.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	40.42	9.00e-108	382.00
IUUC-Sce-106227	Saccharomyces cerevisiae	41.19	3.00e-111	394.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	44.99	4.00e-124	436.00
IUUC-Spo-108359	Schizosaccharomyces pombe	43.79	3.00e-124	436.00
IUUC-Smo-108814	Selaginella moellendorffii	54.52	2.00e-140	490.00
IUUC-Sit-110158	Setaria italica	46.41	7.00e-110	389.00
IUUC-Sly-111569	Solanum lycopersicum	50.39	2.00e-117	414.00
IUUC-Stu-112403	Solanum tuberosum	47.34	5.00e-117	412.00
IUUC-Sbi-114817	Sorghum bicolor	45.82	8.00e-107	379.00
IUUC-Sre-115150	Sporisorium reilianum	41.70	2.00e-111	394.00
IUUC-Tru-118535	Takifugu rubripes	40.40	2.00e-107	381.00
IUUC-Tca-121165	Theobroma cacao	44.62	9.00e-128	448.00
IUUC-Tre-122114	Trichoderma reesei	43.46	2.00e-121	427.00
IUUC-Tvi-122437	Trichoderma virens	44.81	1.00e-122	431.00
IUUC-Tae-123887	Triticum aestivum	44.75	1.00e-121	428.00
IUUC-Tur-126078	Triticum urartu	44.62	1.00e-120	424.00
IUUC-Tme-127208	Tuber melanosporum	46.28	3.00e-133	466.00
IUUC-Ttr-129047	Tursiops truncatus	44.71	1.00e-95	342.00
IUUC-Uma-129320	Ustilago maydis	39.18	5.00e-111	393.00
IUUC-Vda-129926	Verticillium dahliae	43.22	3.00e-123	433.00
IUUC-Vvi-131643	Vitis vinifera	48.21	2.00e-125	440.00
IUUC-Yli-134674	Yarrowia lipolytica	44.53	3.00e-105	373.00
IUUC-Zma-135903	Zea mays	51.11	5.00e-110	389.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence