iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108828

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377567

Gene Name

SELMODRAFT_77968

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_77968	EFJ36319	EFJ36319

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-34	117.7	178	218
UBD/Beta-Prp	2.10e-67	228.1	8	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           H  +v+c+++    d ++l++GsdD t kvWD+ t  ++++
   Q: 178  HVKGVNCVEYftgGDrPYLITGSDDQTAKVWDYQTKACVQT 218
           8899****966*9778*****************99999885 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdkl 109
           ++++++cv+ +p +++++++ ++g+i +w+ +t+ ++++++  e +v++ kf+++++++v g++D+ i+v++++t + v ++++h+d+++++ ++p+   +
   Q: 8    RSERVKCVDLHPTEPWILASLYTGSIYIWNHQTQGVVKTFEVTELPVRSAKFISRKQWIVAGADDMYIRVYNYNTMDKVKSFEAHTDYIRCVVVHPTLPCV 108
           56789************************************************************************************************ PP
   S: 110  vsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngkelvsgsldgtvklw 207
           +s s+d  i++wd+e+g+   ++++gh++ v+ v+++p++ n ++s+slDrt+++W+l + +   tl   h + v++++     ++++l++gs+d+t k+w
   Q: 109  LSSSDDMLIKLWDWEKGWTCIQIFEGHSHYVMQVALNPKDtNTFASASLDRTIKIWNLGSPEPNFTLDA-HVKGVNCVEyfTGGDRPYLITGSDDQTAKVW 208
           *****************97777*********************************************98.*********7445566*************** PP
   S: 208  dlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgse 285
           d+qt+ cv+tl+ght nv+ v f+p+  ++++gs+Dg++riW +++  l +tl++  ++v+ + +l+ +++v ++ +e
   Q: 209  DYQTKACVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHTTTYRLENTLNYGLERVWMIGYLKGSNRVAIAYDE 286
           *****************************************************************9999998887766 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

LQRKLAQRSE RVKCVDLHPT EPWILASLYT GSIYIWNHQT QGVVKTFEVT ELPVRSAKFI 60
SRKQWIVAGA DDMYIRVYNY NTMDKVKSFE AHTDYIRCVV VHPTLPCVLS SSDDMLIKLW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCAGCGCA AGCTTGCGCA ACGATCAGAG CGCGTGAAAT GTGTAGATCT CCATCCCACA 60
GAGCCATGGT ATGTAGCCAT TCGACTAAGA GCGTGAATGA TTTTCTATGC ATTCGCCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR020472--G-protein_beta_WD-40_rep
IPR008939--Lytic_TGlycosylase_superhlx_U
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG

smo:SELMODRAFT_77968

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003090	Amborella trichopoda	78.99	0.00e+00	1362.00
IUUC-Afl-008535	Aspergillus flavus	50.51	0.00e+00	846.00
IUUC-Afu-008845	Aspergillus fumigatus	51.52	0.00e+00	868.00
IUUC-Bci-013866	Botrytis cinerea	52.95	0.00e+00	877.00
IUUC-Csa-023383	Chlorocebus sabaeus	64.36	0.00e+00	808.00
IUUC-Cgl-026649	Colletotrichum gloeosporioides	49.26	0.00e+00	787.00
IUUC-Cne-026986	Cryptococcus neoformans	49.82	0.00e+00	861.00
IUUC-Ete-033166	Echinops telfairi	56.86	0.00e+00	676.00
IUUC-Fso-038268	Fusarium solani	52.34	0.00e+00	846.00
IUUC-Ggr-039863	Gaeumannomyces graminis	52.33	0.00e+00	865.00
IUUC-Hvu-047669	Hordeum vulgare	84.53	0.00e+00	641.00
IUUC-Mtr-058310	Medicago truncatula	80.76	0.00e+00	1408.00
IUUC-Ont-071563	Oreochromis niloticus	62.10	0.00e+00	1079.00
IUUC-Ola-087245	Oryzias latipes	61.73	0.00e+00	1077.00
IUUC-Pno-094785	Phaeosphaeria nodorum	56.70	3.00e-101	362.00
IUUC-Ppa-095911	Physcomitrella patens	81.99	0.00e+00	1385.00
IUUC-Pgr-103590	Puccinia graminis	51.41	0.00e+00	887.00
IUUC-Ptt-103868	Puccinia triticina	51.53	0.00e+00	885.00
IUUC-Spo-108299	Schizosaccharomyces pombe	46.09	0.00e+00	778.00
IUUC-Sre-115040	Sporisorium reilianum	51.35	0.00e+00	865.00
IUUC-Tru-118025	Takifugu rubripes	61.82	0.00e+00	1077.00
IUUC-Uma-129351	Ustilago maydis	49.88	0.00e+00	857.00
IUUC-Vda-129716	Verticillium dahliae	52.96	0.00e+00	888.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence