iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	Mentha
Protein 3D Structure
PDB	MMDB
Post-translational Modifications (PTMs)
dbPTM	UniProt
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UFD/MUB	MUB	25320573

Classification

Family	E-value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.50e-10	41.0	9	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 2    qvtvksldgs.eltlkvnpsdtVaeLKeki......ekklgip.peqqrLiykGkiLeddktLady 59
           +++++ +dgs +++  ++ ++tV+ LKe +      ek+ g   + +++Li +Gk+Le+ kt++dy
   Q: 9    EIKFRLTDGSdIGPKAFPDATTVSALKETVisewprEKENGPKtVKEVKLISAGKVLENSKTVKDY 74
           799*******99998899999**************9999**************************9 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAEVHNQLEI KFRLTDGSDI GPKAFPDATT VSALKETVIS EWPREKENGP KTVKEVKLIS 60
AGKVLENSKT VKDYRSPVSN LAGAVTTMHV IIQAPVTEKE KKPKGDPKMN KCVCSVM 117

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAAATAAA ATAAAAAATT AAAATTTGTT TCTGGATTAA GTAAGTAGTG CGTTGTTTCC 60
AAGTAGTGAT ATCAATATCA AATTGTCGAA TTTACACGAA GAACAAAAAT AAGGAATCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0449--Lipoprotein
KW-0472--Membrane
KW-0488--Methylation
KW-0564--Palmitate
KW-0636--Prenylation
KW-1185--Reference proteome

Interpro

IPR017000--MUB
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

ath:AT3G01050

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006430	Arabidopsis lyrata	96.58	3.00e-63	232.00
IUUC-Bra-016618	Brassica rapa	84.75	1.00e-50	190.00
IUUC-Cgl-026749	Colletotrichum gloeosporioides	32.00	1.00e-03	36.20
IUUC-Dse-031360	Dothistroma septosporum	29.51	3.90e-02	31.20
IUUC-Lch-049833	Latimeria chalumnae	57.14	7.30e-02	29.60
IUUC-Mor-057111	Magnaporthe oryzae	32.08	6.00e-04	37.40
IUUC-Mtr-057723	Medicago truncatula	56.41	3.00e-37	145.00
IUUC-Pop-099178	Populus trichocarpa	60.68	1.00e-40	157.00
IUUC-Ppe-102073	Prunus persica	64.10	1.00e-43	167.00
IUUC-Sly-111437	Solanum lycopersicum	58.97	2.00e-41	159.00
IUUC-Stu-112071	Solanum tuberosum	58.12	7.00e-41	157.00
IUUC-Tre-122042	Trichoderma reesei	30.19	1.00e-03	35.80
IUUC-Tvi-122383	Trichoderma virens	30.00	3.00e-03	35.00
IUUC-Vda-129896	Verticillium dahliae	28.92	4.00e-06	42.40
IUUC-Vvi-131029	Vitis vinifera	63.25	5.00e-43	165.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence