iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098850

Ensembl Protein ID

POPTR_0012s04660.1

UniProt Accession

B9I2G7; B9I2G7_POPTR

Genbank Protein ID

EEE96105.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_834265; POPTR_0012s04660g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s04660	POPTR_0012s04660.1	POPTR_0012s04660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-33	112.4	533	563
UBD/Beta-Prp	1.00e-58	200.0	54	313

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           Ht++++cla+ +d  ++++Gs D+ + ++++
   Q: 533  HTARINCLAWsPDsSMVATGSLDNCVIIYEI 563
           9**********999**************985 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD....rtikvwdlstgkcvhtlkg 92
           g+h  + t+  +sp+++++a++  +gt+++w + +  +l++  +  ++ + ++++spdg +++ +s D     +++ +  ++g+ v  + g
   Q: 54   GEHAYQATVARYSPNGEWIASADVSGTVRIWGAYNDHVLKKEfKVLTGRIDDLQWSPDG-LRIVASGDgkgkSLVRAFMWDSGTNVGEFDG 143
           56777889999********************988777765554***************9.999999999*999****************** PP
   S: 93   hedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgght 180
           h+++vls++f p++  ++v+ ++d  ++ ++ +  +  +   + h+ +vncv+++pdg+ ++s s D++  l+d ktg+ + +   + gh+
   Q: 144  HSRRVLSCAFKPTRpFRIVTCGEDFLVNFYEGPPFKFKS-SHRDHSNFVNCVRFSPDGSKFISVSSDKKGILFDGKTGEKIGQIssEDGHK 233
           ************99899*******************999.********************************************99667** PP
   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlq.......tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW...dl 251
           +s+y +s++++gk+++++s d++ k+w++        t++   +  g  d +++  ++ ++++lv++s  g+i+i+   dl
   Q: 234  GSIYAVSWSPDGKQVLTVSADKSAKVWEICddgsgklTKTLTSSGSGGVDDMLVGCLW-QNDHLVTVSLGGTISIFsasDL 313
           *****************************999*6666666666666777888888888.7888999********9855555 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTELAETYAC VPSTERGRGI LISGHPKTNK ILYTNNRSIL ILNLDNPLDV SVYGEHAYQA 60
TVARYSPNGE WIASADVSGT VRIWGAYNDH VLKKEFKVLT GRIDDLQWSP DGLRIVASGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCCATCAA ATCTAAAATG ACAGAGCTGG CAGAAACCTA CGCTTGCGTT CCCTCAACAG 60
AGCGAGGCAG GGGGATCCTA ATTTCCGGTC ATCCAAAAAC CAATAAAATC CTCTACACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0042643--C:actomyosin, actin portion
GO:0030864--C:cortical actin cytoskeleton
GO:0051015--F:actin filament binding
GO:0030042--P:actin filament depolymerization
GO:0030836--P:positive regulation of actin filament depolymerization

KEGG

pop:POPTR_0012s04660g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	68.47	0.00e+00	750.00
IUUC-Aml-002368	Ailuropoda melanoleuca	36.51	3.00e-108	385.00
IUUC-Atr-003160	Amborella trichopoda	75.12	0.00e+00	971.00
IUUC-Apl-004012	Anas platyrhynchos	37.97	3.00e-108	385.00
IUUC-Aca-004707	Anolis carolinensis	37.25	7.00e-111	394.00
IUUC-Aly-006465	Arabidopsis lyrata	80.43	0.00e+00	998.00
IUUC-Ath-006740	Arabidopsis thaliana	80.43	0.00e+00	999.00
IUUC-Ago-007920	Ashbya gossypii	28.03	3.00e-65	242.00
IUUC-Acl-008262	Aspergillus clavatus	39.44	1.00e-69	256.00
IUUC-Afl-008471	Aspergillus flavus	30.48	3.00e-72	266.00
IUUC-Afu-008989	Aspergillus fumigatus	32.56	8.00e-75	274.00
IUUC-Ani-009167	Aspergillus nidulans	33.98	9.00e-92	330.00
IUUC-Ang-009595	Aspergillus niger	32.26	6.00e-80	291.00
IUUC-Aor-009908	Aspergillus oryzae	33.56	6.00e-87	314.00
IUUC-Ate-010580	Aspergillus terreus	33.39	3.00e-83	303.00
IUUC-Ame-011269	Astyanax mexicanus	43.62	2.00e-44	173.00
IUUC-Bgr-011996	Blumeria graminis	31.63	1.00e-80	293.00
IUUC-Bta-013278	Bos taurus	37.42	1.00e-112	399.00
IUUC-Bci-013925	Botrytis cinerea	32.35	6.00e-84	304.00
IUUC-Bdi-014659	Brachypodium distachyon	66.72	0.00e+00	872.00
IUUC-Bol-016043	Brassica oleracea	70.92	0.00e+00	914.00
IUUC-Bra-017139	Brassica rapa	80.07	0.00e+00	994.00
IUUC-Cel-018417	Caenorhabditis elegans	33.60	2.00e-89	322.00
IUUC-Cja-019952	Callithrix jacchus	37.32	4.00e-106	378.00
IUUC-Cfa-020225	Canis familiaris	36.60	8.00e-111	394.00
IUUC-Cpo-021900	Cavia porcellus	37.05	6.00e-107	380.00
IUUC-Csa-023028	Chlorocebus sabaeus	36.76	5.00e-106	377.00
IUUC-Cho-025030	Choloepus hoffmanni	31.70	9.00e-70	257.00
IUUC-Csv-025986	Ciona savignyi	31.06	1.00e-56	213.00
IUUC-Cgl-026597	Colletotrichum gloeosporioides	34.43	4.00e-86	311.00
IUUC-Dre-027498	Danio rerio	43.52	2.00e-44	171.00
IUUC-Dno-029383	Dasypus novemcinctus	36.39	1.00e-105	376.00
IUUC-Dor-030633	Dipodomys ordii	35.96	3.00e-97	348.00
IUUC-Dse-031526	Dothistroma septosporum	32.30	9.00e-82	297.00
IUUC-Ete-032780	Echinops telfairi	34.22	5.00e-94	338.00
IUUC-Eca-034306	Equus caballus	36.62	2.00e-106	379.00
IUUC-Eeu-034531	Erinaceus europaeus	31.15	9.00e-34	137.00
IUUC-Fca-036301	Felis catus	37.38	2.00e-111	395.00
IUUC-Fal-037361	Ficedula albicollis	38.24	2.00e-116	412.00
IUUC-Gmo-039238	Gadus morhua	37.75	6.00e-107	380.00
IUUC-Ggr-039830	Gaeumannomyces graminis	30.98	5.00e-73	268.00
IUUC-Gga-040235	Gallus gallus	37.91	8.00e-109	387.00
IUUC-Gac-042363	Gasterosteus aculeatus	37.48	1.00e-109	390.00
IUUC-Gma-043218	Glycine max	80.69	0.00e+00	1036.00
IUUC-Ggo-044632	Gorilla gorilla	35.55	7.00e-103	367.00
IUUC-Hsa-045792	Homo sapiens	36.76	4.00e-111	394.00
IUUC-Hvu-047517	Hordeum vulgare	67.05	0.00e+00	899.00
IUUC-Itr-048076	Ictidomys tridecemlineatus	36.74	4.00e-111	394.00
IUUC-Lch-050428	Latimeria chalumnae	38.56	1.00e-116	412.00
IUUC-Lpe-051306	Leersia perrieri	69.84	0.00e+00	925.00
IUUC-Loc-052096	Lepisosteus oculatus	34.98	7.00e-93	334.00
IUUC-Lma-053313	Leptosphaeria maculans	34.97	3.00e-92	334.00
IUUC-Laf-054060	Loxodonta africana	36.56	1.00e-105	376.00
IUUC-Mcc-055619	Macaca mulatta	36.22	1.00e-102	366.00
IUUC-Meu-056689	Macropus eugenii	35.44	6.00e-69	254.00
IUUC-Mor-056940	Magnaporthe oryzae	31.54	8.00e-73	267.00
IUUC-Mpo-057557	Magnaporthe poae	27.00	1.00e-49	190.00
IUUC-Mtr-057922	Medicago truncatula	80.36	0.00e+00	1026.00
IUUC-Mga-060150	Meleagris gallopavo	38.13	8.00e-109	387.00
IUUC-Mmr-061226	Microcebus murinus	36.07	9.00e-105	373.00
IUUC-Mdo-062674	Monodelphis domestica	37.48	1.00e-114	406.00
IUUC-Mmu-064170	Mus musculus	36.32	1.00e-106	379.00
IUUC-Mac-065124	Musa acuminata	76.19	0.00e+00	992.00
IUUC-Mpu-066001	Mustela putorius furo	34.76	2.00e-104	372.00
IUUC-Mlu-067253	Myotis lucifugus	37.15	4.00e-106	378.00
IUUC-Nfi-068550	Neosartorya fischeri	32.79	5.00e-86	311.00
IUUC-Nle-070115	Nomascus leucogenys	35.37	3.00e-96	345.00
IUUC-Opr-070254	Ochotona princeps	36.02	7.00e-103	367.00
IUUC-Ont-071666	Oreochromis niloticus	38.13	2.00e-110	392.00
IUUC-Oan-073594	Ornithorhynchus anatinus	31.31	1.00e-29	123.00
IUUC-Ocu-074824	Oryctolagus cuniculus	34.92	4.00e-100	358.00
IUUC-Oba-075010	Oryza barthii	69.18	0.00e+00	922.00
IUUC-Obr-076364	Oryza brachyantha	70.00	0.00e+00	922.00
IUUC-Ogl-077019	Oryza glaberrima	69.18	0.00e+00	922.00
IUUC-Ogu-078496	Oryza glumaepatula	69.18	0.00e+00	922.00
IUUC-Oin-080116	Oryza indica	69.02	0.00e+00	920.00
IUUC-Olo-080290	Oryza longistaminata	69.34	0.00e+00	924.00
IUUC-Ome-081969	Oryza meridionalis	69.02	0.00e+00	920.00
IUUC-Oni-082075	Oryza nivara	69.18	0.00e+00	922.00
IUUC-Opu-083959	Oryza punctata	70.00	0.00e+00	925.00
IUUC-Oru-084711	Oryza rufipogon	69.18	0.00e+00	922.00
IUUC-Osa-085958	Oryza sativa	69.02	0.00e+00	920.00
IUUC-Ola-086968	Oryzias latipes	36.72	2.00e-113	402.00
IUUC-Oga-089108	Otolemur garnettii	36.08	2.00e-109	389.00
IUUC-Oar-089986	Ovis aries	35.17	2.00e-98	352.00
IUUC-Ptr-091281	Pan troglodytes	36.78	4.00e-110	391.00
IUUC-Pan-092585	Papio anubis	36.93	5.00e-106	377.00
IUUC-Psi-093811	Pelodiscus sinensis	36.66	2.00e-110	392.00
IUUC-Pma-094542	Petromyzon marinus	35.82	9.00e-110	390.00
IUUC-Pno-095086	Phaeosphaeria nodorum	34.02	2.00e-86	313.00
IUUC-Pfo-096973	Poecilia formosa	37.81	5.00e-120	424.00
IUUC-Pab-098391	Pongo abelii	36.76	4.00e-106	378.00
IUUC-Pca-100257	Procavia capensis	55.00	4.00e-23	102.00
IUUC-Ppe-101578	Prunus persica	83.25	0.00e+00	1071.00
IUUC-Pva-102872	Pteropus vampyrus	35.07	2.00e-102	366.00
IUUC-Pte-104365	Pyrenophora teres	34.20	3.00e-84	305.00
IUUC-Pyt-104689	Pyrenophora triticirepentis	33.87	5.00e-87	314.00
IUUC-Rno-105737	Rattus norvegicus	36.32	2.00e-110	392.00
IUUC-Sce-106383	Saccharomyces cerevisiae	30.66	2.00e-66	246.00
IUUC-Sha-107084	Sarcophilus harrisii	36.67	2.00e-91	329.00
IUUC-Sja-107688	Schizosaccharomyces japonicus	34.66	2.00e-95	342.00
IUUC-Spo-108309	Schizosaccharomyces pombe	34.81	9.00e-86	310.00
IUUC-Smo-109255	Selaginella moellendorffii	54.17	0.00e+00	658.00
IUUC-Sit-109962	Setaria italica	69.84	0.00e+00	929.00
IUUC-Stu-111971	Solanum tuberosum	80.30	0.00e+00	1038.00
IUUC-Sar-113415	Sorex araneus	45.93	9.00e-31	127.00
IUUC-Sbi-114857	Sorghum bicolor	69.51	0.00e+00	920.00
IUUC-Tgu-117256	Taeniopygia guttata	38.46	4.00e-116	411.00
IUUC-Tru-117871	Takifugu rubripes	37.34	3.00e-112	398.00
IUUC-Tsy-119172	Tarsius syrichta	42.45	4.00e-56	211.00
IUUC-Tni-120339	Tetraodon nigroviridis	37.15	6.00e-114	404.00
IUUC-Tca-121609	Theobroma cacao	82.83	0.00e+00	1071.00
IUUC-Tre-122076	Trichoderma reesei	32.24	4.00e-77	281.00
IUUC-Tae-125412	Triticum aestivum	67.21	0.00e+00	902.00
IUUC-Tur-126845	Triticum urartu	62.73	0.00e+00	725.00
IUUC-Tme-127217	Tuber melanosporum	31.57	1.00e-80	293.00
IUUC-Tbe-127526	Tupaia belangeri	35.02	2.00e-105	376.00
IUUC-Ttr-128898	Tursiops truncatus	34.04	2.00e-94	339.00
IUUC-Vda-129732	Verticillium dahliae	33.17	8.00e-75	274.00
IUUC-Xtr-132860	Xenopus tropicalis	34.73	2.00e-92	332.00
IUUC-Xma-133830	Xiphophorus maculatus	37.64	1.00e-119	422.00
IUUC-Yli-134335	Yarrowia lipolytica	31.33	7.00e-79	287.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence