iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099276

Ensembl Protein ID

POPTR_0008s06970.1

UniProt Accession

B9HHQ9; B9HHQ9_POPTR

Genbank Protein ID

EEE89531.2

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_765583; POPTR_0008s06970g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s06970	POPTR_0008s06970.1	POPTR_0008s06970.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-11	44.3	103	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlr 31
           l+f ++ ++lvs s D+ i+vWDl 
   Q: 103  LEFlQNqGILVSVSSDNEIQVWDLE 127
           567855699**************85 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MFSKLFQKHT AQQQPPSPQQ QPPPQPQSPP AKDNVSKGGL TLKDINPRIA LHYGIPSTAS 60
VLAFDHIQSL LAIGTLDGRI KVIGGDSIEG LLVSPKTLPF KYLEFLQNQG ILVSVSSDNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCAGTCAT CAGCTCTGTA TGACCGTTCA TCTTTAAAAA AAATTCCGAT GAAAACCCCC 60
TGATCATCTC CGTCATATCC GTCGGTGCTT GATAATTTGA ATTCGAAACG AAGAAAGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001388--Synaptobrevin
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50892--V_SNARE
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00957--Synaptobrevin

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0005096--F:GTPase activator activity
GO:0017137--F:Rab GTPase binding
GO:0019905--F:syntaxin binding
GO:0017157--P:regulation of exocytosis
GO:0016192--P:vesicle-mediated transport

KEGG

pop:POPTR_0008s06970g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000919	Aegilops tauschii	41.22	0.00e+00	684.00
IUUC-Apl-003619	Anas platyrhynchos	25.95	3.00e-08	53.90
IUUC-Ago-007756	Ashbya gossypii	28.12	1.00e-05	45.10
IUUC-Acl-008044	Aspergillus clavatus	27.61	4.00e-08	53.10
IUUC-Afl-008612	Aspergillus flavus	32.35	4.00e-11	63.20
IUUC-Afu-008901	Aspergillus fumigatus	32.37	7.00e-11	62.80
IUUC-Ani-009223	Aspergillus nidulans	31.62	3.00e-09	57.00
IUUC-Ang-009861	Aspergillus niger	32.09	2.00e-10	61.20
IUUC-Aor-010078	Aspergillus oryzae	32.35	4.00e-11	63.20
IUUC-Ate-010462	Aspergillus terreus	34.04	9.00e-12	65.50
IUUC-Bgr-012214	Blumeria graminis	26.03	4.00e-09	57.00
IUUC-Cpo-021931	Cavia porcellus	25.28	5.00e-07	49.70
IUUC-Cho-025086	Choloepus hoffmanni	32.86	3.00e-06	47.40
IUUC-Cgl-026432	Colletotrichum gloeosporioides	25.10	7.00e-13	69.30
IUUC-Dor-030660	Dipodomys ordii	31.97	9.00e-14	72.40
IUUC-Eeu-034943	Erinaceus europaeus	25.54	8.00e-15	75.90
IUUC-Fox-037853	Fusarium oxysporum	24.51	1.00e-12	68.60
IUUC-Fso-038327	Fusarium solani	25.40	2.00e-15	77.40
IUUC-Ggr-039723	Gaeumannomyces graminis	23.60	9.00e-10	58.90
IUUC-Itr-048722	Ictidomys tridecemlineatus	31.43	7.00e-06	46.20
IUUC-Lch-049973	Latimeria chalumnae	30.23	6.00e-07	49.70
IUUC-Mga-059850	Meleagris gallopavo	23.58	2.00e-08	54.30
IUUC-Mpu-065780	Mustela putorius furo	26.41	1.00e-15	77.00
IUUC-Nfi-068318	Neosartorya fischeri	32.37	7.00e-11	62.80
IUUC-Olo-080693	Oryza longistaminata	38.46	0.00e+00	629.00
IUUC-Sce-106140	Saccharomyces cerevisiae	27.86	1.00e-08	55.10
IUUC-Sha-106592	Sarcophilus harrisii	25.68	4.00e-08	53.50
IUUC-Sar-113007	Sorex araneus	26.41	2.00e-15	78.20
IUUC-Uma-129388	Ustilago maydis	24.66	1.00e-03	38.90
IUUC-Vda-129843	Verticillium dahliae	24.59	1.00e-10	62.00
IUUC-Vpa-130524	Vicugna pacos	26.09	7.00e-15	76.30
IUUC-Xtr-132060	Xenopus tropicalis	32.56	1.00e-09	58.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence