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Tag Content
UUCD2 ID IUUC-Vvi-131711
UUCD1 version UUC-ViV-00574
Ensembl Protein ID VIT_16s0050g00020.t01
UniProt Accession F6H6Q3; F6H6Q3_VITVI
Genbank Protein ID CCB47896.1
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID FN595243
Gene Name VIT_16s0050g00020
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_16s0050g00020 VIT_16s0050g00020.t01 VIT_16s0050g00020.t01
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.00e-37 124.4 250 284
UBD/Beta-Prp 1.50e-49 169.3 50 330
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
    gH+ +vt ++f +++++v+++ Dg +++W++++ +
   Q: 250 GHQKPVTYVRFlDEHMMVTSGTDGCLRLWSMHDAR 284
    8**********6669***************99876 PP
   


   UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheae......................vtavkfspdgkilvtg 70
    + g+ ++ i ++ f p+++l+atg+ ++i+v++v++ l ++h+ + ++++++p ++ +v g
   Q: 50 STGASTDTIGVIEFDPSDNLVATGGIARKIRVYSVKS---LLPGENHSHGehnvkllqhnnacdyyiwtpakLSSLRWKPGSSGRVLG 134
    56889999****************************9...33344555445566677777779******************9977777 PP
   S: 71 seD..rtikvwdlstgkcvhtlkgh.edsvlslsfsp.sgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdg.n 150
    s D +++ +dl+ ++ +h ++++s+++s + + +sGs+d ti++wd + + + s g+v+cv+++p+g
   Q: 135 SGDydGVVTEYDLDRKIPIFERDEHgGRRIWSVDYSHwNPFVGASGSDDGTIQMWDPRCEGTTNVakvRPSAGGGAVCCVEFNPFGgP 222
    77765999999999777777777772579********555778*************88666555344556777889************ PP
   S: 151 llvsGslDrtvrlWdl.ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs..pnde 235
    l++ G++Dr +d+ k+ + + + g h+++v+ + f ++ +v+ ++dg ++lw+++ +++r + gh ++ + v +s + +
   Q: 223 LVAVGCADRRAYGYDVrKMVDPVLIFDG-HQKPVTYVRFLDE-HMMVTSGTDGCLRLWSMHDARMIRVYMGHMNTRNFVGLSvwRTGG 308
    ****************778899999*99.************7.699**************************976665544444**** PP
   S: 236 rlvsgssDgsiriWdlrsgdll 257
    +l +gs+ + ++++d+r ++++
   Q: 309 LLGCGSENNHVFVYDKRWSEPI 330
    ***************9987764 PP
   

Organism Vitis vinifera
Protein Sequence
(Fasta)
MKNFSTQFNP QSPEVENPNI QEEKAEQHIE EERARCDWEF NLSTVVTSSS TGASTDTIGV 60
IEFDPSDNLV ATGGIARKIR VYSVKSLLPG ENHSHGEHNV KLLQHNNACD YYIWTPAKLS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Vvi-131711|E3,WD_repeat;UBD,Beta-Prp|Vitis vinifera
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAAAAACT TCTCAACGCA ATTCAATCCT CAAAGCCCAG AAGTAGAAAA CCCAAACATA 60
CAAGAAGAAA AGGCAGAACA ACACATAGAA GAAGAAAGAG CTAGGTGCGA CTGGGAATTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Vvi-131711|E3,WD_repeat;UBD,Beta-Prp|Vitis vinifera
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002851 Amborella trichopoda 46.37 5.00e-88 317.00
IUUC-Aly-005431 Arabidopsis lyrata 65.76 5.00e-124 436.00
IUUC-Ath-006939 Arabidopsis thaliana 65.15 3.00e-118 417.00
IUUC-Bdi-014616 Brachypodium distachyon 48.65 1.00e-69 256.00
IUUC-Bol-016424 Brassica oleracea 63.09 2.00e-110 391.00
IUUC-Bra-016672 Brassica rapa 59.65 4.00e-113 400.00
IUUC-Cre-022579 Chlamydomonas reinhardtii 34.62 2.00e-41 162.00
IUUC-Ogl-077687 Oryza glaberrima 44.19 1.00e-63 236.00
IUUC-Oin-079632 Oryza indica 43.19 4.00e-63 234.00
IUUC-Ome-081923 Oryza meridionalis 42.42 6.00e-60 223.00
IUUC-Oni-082448 Oryza nivara 43.19 2.00e-63 235.00
IUUC-Opu-083787 Oryza punctata 43.10 4.00e-78 284.00
IUUC-Oru-085278 Oryza rufipogon 42.42 6.00e-60 223.00
IUUC-Ppa-095874 Physcomitrella patens 36.87 2.00e-59 223.00
IUUC-Pop-099510 Populus trichocarpa 63.97 1.00e-141 495.00
IUUC-Ppe-102088 Prunus persica 64.14 2.00e-134 471.00
IUUC-Smo-109171 Selaginella moellendorffii 34.74 4.00e-59 221.00
IUUC-Sly-111536 Solanum lycopersicum 58.58 7.00e-124 436.00
IUUC-Stu-112915 Solanum tuberosum 59.94 1.00e-127 448.00
IUUC-Tca-120952 Theobroma cacao 64.84 2.00e-149 521.00
IUUC-Tae-123036 Triticum aestivum 46.46 1.00e-68 253.00
Created Date 25-Jun-2017

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