iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017813

Ensembl Protein ID

Bra003262.1-P

UniProt Accession

M4CGC9; M4CGC9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003262	Bra003262.1	Bra003262.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-08	33.3	274	309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.....sd.tllvsGsdDgt.ikvWDlrtg 33
           ++++ ++++     +  + l++   D+  +++WD+ tg
   Q: 274  ESPILSIKWqrtlnTQePKLIT--TDKHiVRIWDPNTG 309
           5899******999622578888..8877699***9887 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTTYGDRVKS TSINGVKLYH VSCAPNVATW LNPKKQRALR KNPHYMQRVE LIQDLKFGNA 60
TTRIKATPDG EYLIASGTYP SQVKVYELGQ LGLKFERHLD SAIVDFEILD DDYSKLAFLC 120

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Nucleotide Sequence
(Fasta)

ATGACGACTT ATGGAGATAG AGTGAAGTCG ACATCCATTA ACGGAGTTAA GTTATACCAT 60
GTTTCTTGTG CCCCCAATGT TGCTACTTGG CTTAACCCTA AGAAGCAACG AGCTCTCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR012580--NUC153
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF08159--NUC153

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015981	Brassica oleracea	93.67	0.00e+00	1232.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence