iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131308

UUCD1 version

UUC-ViV-01137

Ensembl Protein ID

VIT_08s0032g00600.t01

UniProt Accession

D7U8M2; D7U8M2_VITVI

Genbank Protein ID

CBI39086.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596742

Gene Name

VIT_08s0032g00600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0032g00600	VIT_08s0032g00600.t01	VIT_08s0032g00600.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.80e-70	237.7	198	521
ULD/UDP/UBQ/UBQ_Other	9.30e-06	26.0	592	633

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
           +GlkN+g+tCYmNS+LQ+L++ip +r+++ +     ++ ++++ p+g++  +lq+lf +l ++++++v+++el+k++++    +++++
   Q: 198  VGLKNQGATCYMNSLLQTLYHIPYFRKAVYH-----MPTTENDMPSGSIPLALQSLFYKL-QYNDNSVATKELTKSFGWDT--YDSFM 277
           6******************************.....555556789***************.99999************877..67*** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpv 176
           q+D+qE+ ++l ++le+++                          k +  + +i++lF+g+  + i c + d +s+r+e+f+dl+l+v
   Q: 278  QHDVQELNRVLCEKLEDKM--------------------------KGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDV 339
           *******************..........................7899*************************************** PP
   S: 177  pgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdls.. 262
           +g +     ++  +++++++ e+leg+n+y+ e+  ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ldl+  
   Q: 340  KGCR-----DVYASFDKYVEVERLEGDNRYQAENH-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDre 421
           ****.....9**********************996.69***********************************************955 PP
   S: 263  ..pfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg.................... 327
             ++++ p+ + ++++ Y L++v+vHsG++++GHY+a+++   +++W++fdD++Vt+ +  + lee+                     
   Q: 422  ngKYLS-PDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPtLSDQWFKFDDERVTKEDTRRALEEQYggeeelpqtnpgfnntpfkf 508
           544554.5666678**************************945677*************9999997769******************* PP
   S: 328  ...staYvlfYkr 337
              s+aY+l+Y r
   Q: 509  tkySNAYMLVYIR 521
           ***********87 PP

ULD/UDP/UBQ/UBQ_Other

   S: 11   s.eltlkvnpsdtVaeLKekiekklgippeqqrLiyk....G 47
             + ++++ +++++  +Ke++ k++gip++ qr +++    +
   Q: 592  DkVRSFRIQKQWPFTLFKEEVAKEFGIPVQYQRFWIWakrqN 633
           4478889999999999*******************8844442 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MTLMTPAPLD QQEDEEMLVP HSDLVEGPQP MEVVAQADAS SAVENQPVED PQTSRFTWTI 60
ENFSRLNTKK HYSEIFVVGG FKWRVLIFPK GNNVDHLSMY LDVADSATLP YGWSRYAQFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTTCTCTC TCTTCTCCCC TTCTTCAGAT TCGTCAATCG GACGATCCAT TTGCCTCCGC 60
CATGACTCTC ATGACTCCTG CGCCATTGGA TGTATATACC AGCTCTGTGT TTCTCTCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR023173--NADPH_Cyt_P450_Rdtase_dom3
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000761	Aegilops tauschii	78.48	0.00e+00	1756.00
IUUC-Aly-006427	Arabidopsis lyrata	86.58	0.00e+00	1940.00
IUUC-Ath-006591	Arabidopsis thaliana	85.79	0.00e+00	1897.00
IUUC-Bdi-015069	Brachypodium distachyon	84.46	0.00e+00	1880.00
IUUC-Bol-016114	Brassica oleracea	86.68	0.00e+00	1904.00
IUUC-Bra-017080	Brassica rapa	86.40	0.00e+00	1943.00
IUUC-Cre-022708	Chlamydomonas reinhardtii	55.98	2.00e-145	508.00
IUUC-Cme-027103	Cyanidioschyzon merolae	38.19	9.00e-126	444.00
IUUC-Ggr-040029	Gaeumannomyces graminis	35.73	5.00e-167	581.00
IUUC-Hvu-047749	Hordeum vulgare	83.26	0.00e+00	1572.00
IUUC-Kpa-049121	Komagataella pastoris	31.71	3.00e-132	465.00
IUUC-Lpe-051543	Leersia perrieri	82.68	0.00e+00	1818.00
IUUC-Mla-058899	Melampsora laricipopulina	37.67	0.00e+00	684.00
IUUC-Mvi-060207	Microbotryum violaceum	38.07	0.00e+00	664.00
IUUC-Oba-075823	Oryza barthii	80.85	0.00e+00	1787.00
IUUC-Obr-076514	Oryza brachyantha	86.32	0.00e+00	1886.00
IUUC-Ogl-077131	Oryza glaberrima	85.78	0.00e+00	1872.00
IUUC-Ogu-078038	Oryza glumaepatula	80.16	0.00e+00	1824.00
IUUC-Oin-079574	Oryza indica	80.16	0.00e+00	1821.00
IUUC-Olo-081067	Oryza longistaminata	82.50	0.00e+00	1747.00
IUUC-Ome-081879	Oryza meridionalis	84.98	0.00e+00	1874.00
IUUC-Oni-082461	Oryza nivara	81.95	0.00e+00	1844.00
IUUC-Opu-083199	Oryza punctata	85.03	0.00e+00	1837.00
IUUC-Oru-085109	Oryza rufipogon	83.27	0.00e+00	1814.00
IUUC-Osa-085418	Oryza sativa	72.30	0.00e+00	1355.00
IUUC-Pop-100083	Populus trichocarpa	90.87	0.00e+00	2029.00
IUUC-Ppe-101523	Prunus persica	90.15	0.00e+00	1999.00
IUUC-Sit-110268	Setaria italica	85.62	0.00e+00	1879.00
IUUC-Sly-111774	Solanum lycopersicum	85.77	0.00e+00	1942.00
IUUC-Stu-112387	Solanum tuberosum	86.21	0.00e+00	1954.00
IUUC-Sbi-114424	Sorghum bicolor	85.57	0.00e+00	1901.00
IUUC-Tca-121501	Theobroma cacao	91.23	0.00e+00	2030.00
IUUC-Tae-125264	Triticum aestivum	83.85	0.00e+00	1889.00
IUUC-Tur-126501	Triticum urartu	74.91	0.00e+00	1640.00
IUUC-Vda-129708	Verticillium dahliae	35.43	7.00e-169	587.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence