iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099594

Ensembl Protein ID

POPTR_0014s13680.1

UniProt Accession

B9IA35; B9IA35_POPTR

Genbank Protein ID

EEE99381.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTR_0014s13680g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s13680	POPTR_0014s13680.1	POPTR_0014s13680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-16	59.7	177	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++v+Dlr+
   Q: 177  HDKEVYDIAWGGvGVFASVSADGSVRVFDLRD 208
           8899******55699**************987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGASSDPNQD GSDEQQKRSE IYTYEAPWHI YAMNWSVRRD KKYRLAIASL LEQYPNRVEI 60
VQLDDSNGEI RSDPNLSFEH PYPPTKTIFI PDKECQKPDL LATSSDFLRV WRINDEQPRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTGCTCTCT CTCTCTCTCC CTCCTTCTTC TGCTGCCGCT GCTTTTTTTT TGTTGTTGTT 60
ATTTTCTTTT CTTTTCCAGT ACAGAAAATG GGAGCTAGCA GCGACCCGAA TCAAGACGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0014s13680g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002576	Amborella trichopoda	87.46	0.00e+00	635.00
IUUC-Ame-010643	Astyanax mexicanus	53.62	2.00e-100	358.00
IUUC-Cre-022609	Chlamydomonas reinhardtii	66.47	2.00e-135	474.00
IUUC-Dor-030262	Dipodomys ordii	60.61	2.00e-32	132.00
IUUC-Ete-032605	Echinops telfairi	50.29	3.00e-86	311.00
IUUC-Gma-043355	Glycine max	95.66	0.00e+00	683.00
IUUC-Mtr-057654	Medicago truncatula	92.61	0.00e+00	673.00
IUUC-Mla-058866	Melampsora laricipopulina	32.03	3.00e-49	189.00
IUUC-Ppa-095734	Physcomitrella patens	81.68	2.00e-165	573.00
IUUC-Ppe-102015	Prunus persica	94.10	0.00e+00	680.00
IUUC-Sha-107196	Sarcophilus harrisii	47.13	7.00e-91	326.00
IUUC-Smo-109172	Selaginella moellendorffii	77.81	3.00e-153	533.00
IUUC-Sly-111410	Solanum lycopersicum	92.80	0.00e+00	674.00
IUUC-Stu-112854	Solanum tuberosum	93.08	0.00e+00	674.00
IUUC-Tca-121561	Theobroma cacao	95.66	0.00e+00	691.00
IUUC-Ttr-129135	Tursiops truncatus	61.20	4.00e-60	224.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence