iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016257

Ensembl Protein ID

Bo9g078420.1

UniProt Accession

A0A0D3E8D0; A0A0D3E8D0_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo9g078420	Bo9g078420.1	Bo9g078420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.90e-09	38.1	174	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +C+++g++++ ++eC++C   fH +Clk++  +e+p+ + wiC+ C+
   Q: 174  CRICFKSGSSNNVMLECDHCLGGFHLKCLKPP-LKEVPEGD-WICQFCQ 220
           ********************************.*******7.******7 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAASTPRTKT FQSPNKTPTN SIYRKSYLSP SSSSATRSHL TPQTPQTLTP LRRSARHVSR 60
KIDLGDNDQE NLNPPIEEMN LIRKRERAPR KQPTDDLQTP KKSKSKSNVD EVSFSPVSPI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCTT CAACTCCTAG AACCAAAACC TTCCAATCCC CAAACAAAAC CCCAACTAAC 60
AGCATCTATC GCAAATCGTA CCTATCTCCT TCTTCTTCTT CAGCAACGCG ATCGCATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003593--AAA+_ATPase
IPR003959--ATPase_AAA_core
IPR001025--BAH_dom
IPR027417--P-loop_NTPase
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF00004--AAA
PF01426--BAH
PF00628--PHD

SMART

SM00382--AAA
SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002930	Amborella trichopoda	67.20	0.00e+00	871.00
IUUC-Aly-005695	Arabidopsis lyrata	80.19	0.00e+00	1205.00
IUUC-Ath-006910	Arabidopsis thaliana	79.11	0.00e+00	1189.00
IUUC-Bra-017118	Brassica rapa	94.61	0.00e+00	1452.00
IUUC-Cre-022831	Chlamydomonas reinhardtii	40.27	8.00e-43	168.00
IUUC-Gmo-039354	Gadus morhua	46.81	2.00e-09	58.90
IUUC-Gma-044341	Glycine max	61.61	0.00e+00	1015.00
IUUC-Hvu-047826	Hordeum vulgare	63.81	0.00e+00	739.00
IUUC-Lpe-051030	Leersia perrieri	64.60	0.00e+00	847.00
IUUC-Mtr-058324	Medicago truncatula	67.29	0.00e+00	976.00
IUUC-Mac-065599	Musa acuminata	65.24	0.00e+00	974.00
IUUC-Oba-075586	Oryza barthii	64.30	0.00e+00	822.00
IUUC-Obr-076569	Oryza brachyantha	63.20	0.00e+00	845.00
IUUC-Ogl-077597	Oryza glaberrima	64.49	0.00e+00	854.00
IUUC-Ogu-078194	Oryza glumaepatula	64.40	0.00e+00	831.00
IUUC-Olo-080478	Oryza longistaminata	62.57	0.00e+00	848.00
IUUC-Ome-081900	Oryza meridionalis	61.64	0.00e+00	857.00
IUUC-Oni-082028	Oryza nivara	58.03	0.00e+00	689.00
IUUC-Oru-085084	Oryza rufipogon	63.57	0.00e+00	831.00
IUUC-Ppa-095664	Physcomitrella patens	56.92	4.00e-134	472.00
IUUC-Pfo-096641	Poecilia formosa	48.94	2.00e-09	59.70
IUUC-Pop-099691	Populus trichocarpa	66.35	0.00e+00	1023.00
IUUC-Ppe-102108	Prunus persica	68.73	0.00e+00	987.00
IUUC-Smo-109166	Selaginella moellendorffii	52.73	0.00e+00	662.00
IUUC-Sit-110797	Setaria italica	64.25	0.00e+00	848.00
IUUC-Tru-118571	Takifugu rubripes	48.94	3.00e-09	58.50
IUUC-Tca-121730	Theobroma cacao	69.57	0.00e+00	986.00
IUUC-Tae-123333	Triticum aestivum	63.03	0.00e+00	861.00
IUUC-Vvi-130915	Vitis vinifera	71.09	0.00e+00	921.00
IUUC-Xma-133230	Xiphophorus maculatus	48.94	2.00e-09	59.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence