iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006771

UUCD1 version

UUC-ArT-01007

Ensembl Protein ID

AT1G01640.1

UniProt Accession

Q9LQ95; Q7XA69; Y1164_ARATH

Genbank Protein ID

AAF78396.1; AEE27315.1; AEE27316.1; AAQ22660.1; BAF01519.1

Protein Name

BTB/POZ domain-containing protein At1g01640

Genbank Nucleotide ID

AC009273; CP002684; CP002684; BT010191; AK229678

Gene Name

At1g01640; T1N6.2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G01640	AT1G01640.1	AT1G01640.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/BCR/BTB_3-box	BTB_3-box	15772280

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB	6.60e-13	49.7	24	91
E3 adaptor/Cullin RING/BCR/BTB_3-box: 3-box	8.70e-09	34.6	127	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB

   S: 1    aDvilvvg..geeffahkivLaasSsvFyalflmeleesksklmveikdvqpevfrallkFlYtgkld 66
           +Dv+++ g     +++hk+vLaa+S+vF+++++++  ++ +++ +++ d++++ ++ ll+FlY+g l+
   Q: 24   TDVLVKPGeeAPPIPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLK 91
           5777777766778*******************666665557************************996 PP

E3 adaptor/Cullin RING/BCR/BTB_3-box: 3-box

   S: 2    eNclgilrfAdlydcpdLkdaaldfilkhF 31
            N+l+il +A +++++ Lkdaa+++i kh+
   Q: 127  RNVLDILELASIPCDTILKDAAINHIVKHM 156
           7****************************8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Interacts with CUL3A.

Protein Sequence
(Fasta)

MTEAEQKAAF LGGLVVSFKE QMHTDVLVKP GEEAPPIPTH KAVLAARSKV FRNMLDSDEC 60
KTSPEESITL PDLSHDELKS LLEFLYSGNL KAPYNQYRSL YLAADKYDIS YLQDVCRNHF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGAAAAGAT CTTAAAAAAA TTCTAGTGAT ATTTCAAAAT CCGATATTCA CCTAAACTTT 60
CGCTTTAAAC ATTTGCTTTT CCGAATTTTT TTGATAATAA ATATTGCTCC ACTAAAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ

PROSITE

PS50097--BTB

Pfam

PF00651--BTB

SMART

SM00225--BTB

Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030162--P:regulation of proteolysis

KEGG

ath:AT1G01640

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005414	Arabidopsis lyrata	84.80	8.00e-95	338.00
IUUC-Bol-015905	Brassica oleracea	83.51	3.00e-94	337.00
IUUC-Bra-017409	Brassica rapa	71.29	8.00e-82	295.00
IUUC-Cre-022559	Chlamydomonas reinhardtii	27.85	4.00e-09	53.90
IUUC-Fox-038034	Fusarium oxysporum	34.92	3.00e-04	38.10
IUUC-Lma-053124	Leptosphaeria maculans	24.68	8.00e-03	33.90
IUUC-Mor-056926	Magnaporthe oryzae	31.18	2.00e-04	39.30
IUUC-Nfi-068401	Neosartorya fischeri	24.32	2.10e-02	33.10
IUUC-Pte-104282	Pyrenophora teres	30.40	2.00e-05	42.00
IUUC-Spo-108022	Schizosaccharomyces pombe	26.12	2.30e+00	26.90
IUUC-Ssl-108435	Sclerotinia sclerotiorum	28.46	1.00e-05	43.50

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence