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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-105130
UUCD1 version UUC-RaN-00183
Ensembl Protein ID ENSRNOP00000020876.3
UniProt Accession D3ZJ28; D3ZJ28_RAT
Genbank Protein ID EDM02488.1
Protein Name RCG36979; Tripartite motif-containing 52
Genbank Nucleotide ID AABR07019127
Gene Name Trim52; rCG_36979
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000024509.2 ENSRNOT00000020876.3 ENSRNOP00000020876.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 4.90e-09 37.0 20 49
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpg 31
    CaiCl+ fkd p++ +CgH f++ C+ q w g
   Q: 20 CAICLDYFKD-PVSIGCGHNFCRGCVtQLW-G 49
    **********.**************98999.3 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MAAPTGPPSP MQSLREEAVC AICLDYFKDP VSIGCGHNFC RGCVTQLWGK EDEQDREPPA 60
VGNHVIREVL FHRYTEQEVF QHRAHAGRWA AHSHRRHRGN ADSVWDDEEE DWNSLQGLVH 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105130|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGCCGGAAGA ACTTGTTTTC GAGCGCGTTG ACGTCATTTC CAGGTGCTTT ATATTGAGGA 60
GCAGCCGGGC GTGTGAGGCA GACGCCGGAT GAGGCTGCTA GCTCTGTGTG AGCTTTGAGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105130|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG rno:290458
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Cre-022560 Chlamydomonas reinhardtii 46.00 8.00e-06 46.20
Created Date 25-Jun-2017

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