iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095412

Ensembl Protein ID

PP1S79_180V6.1

UniProt Accession

A9SHI8; A9SHI8_PHYPA

Genbank Protein ID

EDQ69367.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544968

Gene Name

PHYPADRAFT_164902

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S79_180V6	PP1S79_180V6.1	PP1S79_180V6.1
PP1S79_180V6	PP1S79_180V6.2	PP1S79_180V6.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-35	120.6	184	224
UBD/Beta-Prp	3.40e-67	227.5	14	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+ +v+c+++    d ++l++GsdD t kvWD+ t  ++++
   Q: 184  HQKGVNCVEYftgGDrPHLITGSDDQTAKVWDYQTKGCVQT 224
           9999****966*9778*******************999986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           ++++++cv+ +p +++++++ ++g++ +w++++++l++s++  + +v++ kf+p++++ v +s+D++i+v++++t + v  +++h+d+++++ ++
   Q: 14   RSERVKCVDLHPTEPWILSSLYTGSLHIWNYQNQSLVKSFEVTDLPVRSAKFIPRKQWVVACSDDMFIRVYNYNTMDKVKQFEAHTDYIRCVIVH 108
           67789****************************************************************************************** PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngkel 195
           p+  +++s s+d  i++wd+e+g+   ++++gh++ v+ v+++p++ n ++s+slDrtv++W+l++ +   tl+  h++ v++++     ++++l
   Q: 109  PTLPYVLSCSDDMLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDsNTFASASLDRTVKIWNLSSPEPNFTLEA-HQKGVNCVEyfTGGDRPHL 202
           ************************9999*********************************************98.*********7445566*** PP
   S: 196  vsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnv 279
           ++gs+d+t k+wd+qt+ cv+tl+gh+ nv+   f+p+  ++++gs+Dg++riW  ++  l +tl++  ++v+ + +++ +++v
   Q: 203  ITGSDDQTAKVWDYQTKGCVQTLEGHSHNVSAACFHPELPIILTGSEDGTVRIWHATTYRLENTLNYGLERVWTIGYIKGSKRV 286
           *************************************************************************99984444444 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MPLRLAIKRK LAQRSERVKC VDLHPTEPWI LSSLYTGSLH IWNYQNQSLV KSFEVTDLPV 60
RSAKFIPRKQ WVVACSDDMF IRVYNYNTMD KVKQFEAHTD YIRCVIVHPT LPYVLSCSDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTTGCTGT GCGGCGTTGC GGTGTGCAGT ATCGGAGATC GTTCGCCTCA ACCACTGCGT 60
CGCCCCCGAT CGAGCACCAT GGTAATGCTC TCTTTATACA TTCACCACCA CATCGAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

KEGG

ppp:PHYPADRAFT_164902

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ang-009654	Aspergillus niger	56.45	0.00e+00	819.00
IUUC-Cre-022938	Chlamydomonas reinhardtii	65.54	0.00e+00	1118.00
IUUC-Kpa-049265	Komagataella pastoris	51.68	0.00e+00	867.00
IUUC-Meu-056174	Macropus eugenii	49.71	2.00e-143	503.00
IUUC-Mor-057264	Magnaporthe oryzae	53.16	0.00e+00	860.00
IUUC-Tme-127041	Tuber melanosporum	53.96	0.00e+00	921.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence