iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039988

Ensembl Protein ID

GGTG_01404T0

UniProt Accession

J3NJH2; J3NJH2_GAGT3

Genbank Protein ID

EJT81424.1

Protein Name

DNA polymerase IV

Genbank Nucleotide ID

ADBI01000143

Gene Name

GGTG_01404

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_01404	GGTG_01404T0	GGTG_01404T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBM	4.00e-13	48.1	1017	1042

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBM

   S: 3    sqvDpeVfsqLPeeiQeEvmaelrqq 28
           +++D+ ++++LP +++ Ev+a+ r+q
   Q: 1017 EGMDVGFLAALPKDVRNEVIADHRRQ 1042
           79***********************9 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MGSRLEENSA AVRKRIEKHK FTDETGEEYE ASAFGGFGDY FRRKKIKLQN LDAQIRANAP 60
PDTPQIFKGV VAHVMGYTQP SLQVLHKELV QHGAGFLQYL DYKTMATHII ASVLPPKKVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCAGATGCA ACCACTTAAC GCGACGTGCT TTCTAACTTC CGGGTTTCCC GGCACAGTTA 60
GAGGCCGTCG CTTTCAGCTC TCGACGCCGA ACCGCCCAGG CCCACCAGGC AACAAGAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR025527--DUF4414
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF14377--DUF4414
PF00817--IMS
PF11799--IMS_C

SMART

SM00292--BRCT

Gene Ontology

GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	29.24	5.00e-24	105.00
IUUC-Aml-001185	Ailuropoda melanoleuca	30.79	1.00e-85	310.00
IUUC-Atr-002915	Amborella trichopoda	33.33	2.00e-66	246.00
IUUC-Apl-004054	Anas platyrhynchos	42.90	6.00e-72	264.00
IUUC-Aca-004304	Anolis carolinensis	27.16	2.00e-100	359.00
IUUC-Aly-005696	Arabidopsis lyrata	34.30	4.00e-73	268.00
IUUC-Ath-006893	Arabidopsis thaliana	30.80	6.00e-88	317.00
IUUC-Ago-007722	Ashbya gossypii	34.81	7.00e-60	224.00
IUUC-Acl-008347	Aspergillus clavatus	50.44	0.00e+00	837.00
IUUC-Afl-008444	Aspergillus flavus	56.52	2.00e-177	615.00
IUUC-Afu-008837	Aspergillus fumigatus	42.94	0.00e+00	904.00
IUUC-Ani-009188	Aspergillus nidulans	44.32	0.00e+00	648.00
IUUC-Ang-009866	Aspergillus niger	50.11	0.00e+00	856.00
IUUC-Aor-010107	Aspergillus oryzae	56.52	1.00e-177	615.00
IUUC-Ate-010359	Aspergillus terreus	52.66	0.00e+00	628.00
IUUC-Ame-010664	Astyanax mexicanus	32.60	8.00e-74	270.00
IUUC-Bgr-012244	Blumeria graminis	40.37	3.00e-163	567.00
IUUC-Bta-013405	Bos taurus	35.69	7.00e-80	291.00
IUUC-Bci-013849	Botrytis cinerea	53.32	0.00e+00	749.00
IUUC-Bdi-014066	Brachypodium distachyon	31.73	4.00e-68	251.00
IUUC-Bol-015544	Brassica oleracea	34.68	2.00e-78	286.00
IUUC-Bra-017792	Brassica rapa	32.20	5.00e-73	268.00
IUUC-Cel-018148	Caenorhabditis elegans	31.41	2.00e-62	233.00
IUUC-Cja-019742	Callithrix jacchus	27.40	4.00e-60	225.00
IUUC-Cfa-020112	Canis familiaris	30.45	2.00e-86	312.00
IUUC-Cpo-022152	Cavia porcellus	28.52	7.00e-102	363.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	41.40	6.00e-32	130.00
IUUC-Csa-023504	Chlorocebus sabaeus	35.53	2.00e-81	296.00
IUUC-Cho-024780	Choloepus hoffmanni	30.52	2.00e-24	106.00
IUUC-Cin-025276	Ciona intestinalis	36.38	2.00e-77	282.00
IUUC-Csv-026283	Ciona savignyi	34.09	5.00e-69	254.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	57.52	0.00e+00	922.00
IUUC-Cne-027079	Cryptococcus neoformans	33.54	1.00e-87	317.00
IUUC-Cme-027346	Cyanidioschyzon merolae	28.12	2.00e-41	163.00
IUUC-Dre-028073	Danio rerio	34.38	4.00e-68	251.00
IUUC-Dno-030038	Dasypus novemcinctus	35.96	8.00e-85	307.00
IUUC-Dor-031100	Dipodomys ordii	34.54	2.00e-74	273.00
IUUC-Dse-031310	Dothistroma septosporum	44.66	0.00e+00	936.00
IUUC-Dme-031991	Drosophila melanogaster	30.30	6.00e-78	284.00
IUUC-Ete-033082	Echinops telfairi	41.18	2.00e-42	166.00
IUUC-Eca-033471	Equus caballus	35.76	3.00e-86	312.00
IUUC-Eeu-034993	Erinaceus europaeus	41.49	2.00e-68	252.00
IUUC-Fca-035367	Felis catus	31.05	2.00e-86	312.00
IUUC-Fal-036973	Ficedula albicollis	41.86	7.00e-70	257.00
IUUC-Fox-037677	Fusarium oxysporum	57.67	0.00e+00	834.00
IUUC-Fso-038252	Fusarium solani	53.32	0.00e+00	1191.00
IUUC-Gmo-039669	Gadus morhua	33.67	2.00e-76	279.00
IUUC-Gga-040423	Gallus gallus	42.44	2.00e-71	263.00
IUUC-Gac-042134	Gasterosteus aculeatus	32.71	3.00e-72	265.00
IUUC-Gma-042929	Glycine max	33.62	3.00e-79	288.00
IUUC-Ggo-044528	Gorilla gorilla	32.60	6.00e-83	301.00
IUUC-Hsa-046259	Homo sapiens	31.00	4.00e-82	298.00
IUUC-Hvu-047139	Hordeum vulgare	33.33	1.00e-50	192.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	35.76	1.00e-85	310.00
IUUC-Kpa-049169	Komagataella pastoris	37.23	3.00e-82	298.00
IUUC-Lch-050471	Latimeria chalumnae	34.48	1.00e-76	280.00
IUUC-Lpe-050800	Leersia perrieri	32.40	4.00e-68	251.00
IUUC-Loc-052320	Lepisosteus oculatus	26.08	4.00e-39	155.00
IUUC-Lma-053149	Leptosphaeria maculans	42.88	0.00e+00	830.00
IUUC-Laf-053810	Loxodonta africana	30.65	4.00e-80	291.00
IUUC-Mcc-055574	Macaca mulatta	35.69	3.00e-81	295.00
IUUC-Meu-055945	Macropus eugenii	36.75	4.00e-25	108.00
IUUC-Mor-057195	Magnaporthe oryzae	62.65	0.00e+00	1413.00
IUUC-Mpo-057488	Magnaporthe poae	79.50	0.00e+00	1873.00
IUUC-Mtr-057955	Medicago truncatula	34.24	1.00e-78	286.00
IUUC-Mla-059027	Melampsora laricipopulina	35.10	6.00e-81	293.00
IUUC-Mga-060156	Meleagris gallopavo	42.90	2.00e-71	263.00
IUUC-Mvi-060398	Microbotryum violaceum	36.31	4.00e-78	285.00
IUUC-Mmr-061113	Microcebus murinus	35.63	1.00e-79	290.00
IUUC-Mdo-063001	Monodelphis domestica	36.02	3.00e-80	292.00
IUUC-Mmu-063180	Mus musculus	34.43	7.00e-79	287.00
IUUC-Mac-065551	Musa acuminata	33.82	5.00e-37	147.00
IUUC-Mpu-066525	Mustela putorius furo	30.10	1.00e-85	310.00
IUUC-Mlu-067877	Myotis lucifugus	33.45	1.00e-78	286.00
IUUC-Nfi-068418	Neosartorya fischeri	43.74	0.00e+00	920.00
IUUC-Ncr-068648	Neurospora crassa	54.83	0.00e+00	991.00
IUUC-Nle-069959	Nomascus leucogenys	35.48	1.00e-81	296.00
IUUC-Opr-070522	Ochotona princeps	41.70	2.00e-44	173.00
IUUC-Ont-072293	Oreochromis niloticus	32.01	3.00e-60	226.00
IUUC-Oan-073519	Ornithorhynchus anatinus	43.02	4.00e-76	278.00
IUUC-Ocu-074492	Oryctolagus cuniculus	35.42	1.00e-80	293.00
IUUC-Oba-075567	Oryza barthii	33.87	2.00e-75	275.00
IUUC-Obr-076332	Oryza brachyantha	34.35	7.00e-73	267.00
IUUC-Ogl-077348	Oryza glaberrima	29.04	2.00e-88	319.00
IUUC-Ogu-078779	Oryza glumaepatula	29.00	8.00e-88	317.00
IUUC-Oin-079738	Oryza indica	31.21	7.00e-67	247.00
IUUC-Olo-080701	Oryza longistaminata	31.21	5.00e-67	248.00
IUUC-Ome-081708	Oryza meridionalis	34.34	3.00e-71	262.00
IUUC-Oni-082251	Oryza nivara	33.64	5.00e-73	268.00
IUUC-Opu-083528	Oryza punctata	31.87	4.00e-68	251.00
IUUC-Oru-084293	Oryza rufipogon	33.18	1.00e-71	263.00
IUUC-Osa-085549	Oryza sativa	29.04	3.00e-88	318.00
IUUC-Ola-086793	Oryzias latipes	39.58	2.00e-69	256.00
IUUC-Olu-087786	Ostreococcus lucimarinus	32.10	7.00e-63	233.00
IUUC-Oga-089006	Otolemur garnettii	32.98	3.00e-70	258.00
IUUC-Oar-089597	Ovis aries	36.09	7.00e-87	314.00
IUUC-Ptr-091520	Pan troglodytes	31.00	3.00e-82	298.00
IUUC-Pan-092333	Papio anubis	32.81	4.00e-81	295.00
IUUC-Psi-094004	Pelodiscus sinensis	33.96	4.00e-72	265.00
IUUC-Pma-094128	Petromyzon marinus	31.86	1.00e-40	159.00
IUUC-Pno-094849	Phaeosphaeria nodorum	45.88	0.00e+00	736.00
IUUC-Ppa-095714	Physcomitrella patens	31.88	1.00e-76	280.00
IUUC-Pfo-096569	Poecilia formosa	38.74	4.00e-67	248.00
IUUC-Pab-097960	Pongo abelii	35.48	3.00e-81	295.00
IUUC-Pop-098921	Populus trichocarpa	34.37	1.00e-71	263.00
IUUC-Pca-100509	Procavia capensis	43.45	5.00e-32	132.00
IUUC-Ppe-101730	Prunus persica	30.88	9.00e-79	287.00
IUUC-Pva-102142	Pteropus vampyrus	31.01	2.00e-83	302.00
IUUC-Pgr-103446	Puccinia graminis	33.97	1.00e-62	233.00
IUUC-Ptt-103849	Puccinia triticina	34.24	2.00e-72	266.00
IUUC-Pte-104128	Pyrenophora teres	49.05	0.00e+00	931.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	51.93	0.00e+00	878.00
IUUC-Rno-104871	Rattus norvegicus	30.05	5.00e-84	304.00
IUUC-Sce-106236	Saccharomyces cerevisiae	34.08	4.00e-60	224.00
IUUC-Sha-106962	Sarcophilus harrisii	41.86	1.00e-70	260.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	36.20	6.00e-74	271.00
IUUC-Spo-108170	Schizosaccharomyces pombe	39.77	2.00e-82	298.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	53.65	0.00e+00	773.00
IUUC-Smo-109554	Selaginella moellendorffii	31.54	1.00e-64	240.00
IUUC-Sit-110479	Setaria italica	28.40	7.00e-56	211.00
IUUC-Sly-111752	Solanum lycopersicum	34.44	8.00e-73	267.00
IUUC-Stu-112284	Solanum tuberosum	25.75	3.00e-23	102.00
IUUC-Sar-113304	Sorex araneus	35.04	3.00e-81	295.00
IUUC-Sbi-114196	Sorghum bicolor	28.17	3.00e-55	209.00
IUUC-Sre-115151	Sporisorium reilianum	34.18	2.00e-88	319.00
IUUC-Ssc-116104	Sus scrofa	41.45	1.00e-69	256.00
IUUC-Tgu-117438	Taeniopygia guttata	42.32	1.00e-70	260.00
IUUC-Tru-118553	Takifugu rubripes	36.24	3.00e-63	235.00
IUUC-Tsy-119056	Tarsius syrichta	33.38	2.00e-86	312.00
IUUC-Tni-119933	Tetraodon nigroviridis	32.00	6.00e-72	264.00
IUUC-Tca-121376	Theobroma cacao	30.87	9.00e-90	323.00
IUUC-Tre-121972	Trichoderma reesei	52.06	0.00e+00	829.00
IUUC-Tvi-122342	Trichoderma virens	50.08	0.00e+00	1036.00
IUUC-Tae-123898	Triticum aestivum	33.18	2.00e-70	259.00
IUUC-Tur-126735	Triticum urartu	31.55	8.00e-23	101.00
IUUC-Tme-126999	Tuber melanosporum	48.21	1.00e-117	416.00
IUUC-Tbe-127280	Tupaia belangeri	42.00	8.00e-26	111.00
IUUC-Ttr-129104	Tursiops truncatus	32.24	8.00e-82	297.00
IUUC-Uma-129562	Ustilago maydis	36.17	2.00e-85	309.00
IUUC-Vda-129862	Verticillium dahliae	52.40	0.00e+00	892.00
IUUC-Vpa-130819	Vicugna pacos	33.23	2.00e-42	166.00
IUUC-Vvi-131111	Vitis vinifera	34.25	4.00e-75	275.00
IUUC-Xtr-132629	Xenopus tropicalis	31.74	1.00e-67	250.00
IUUC-Xma-134065	Xiphophorus maculatus	39.83	5.00e-68	251.00
IUUC-Yli-134633	Yarrowia lipolytica	37.53	5.00e-77	281.00
IUUC-Zma-135176	Zea mays	33.12	3.00e-77	282.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence